Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006238_P001 | Maize | plasma membrane | 97.22 | 97.22 |
| OQU92056 | Sorghum | endoplasmic reticulum | 94.62 | 94.62 |
| Os09t0538800-01 | Rice | plasma membrane | 92.21 | 92.21 |
| TraesCS5D01G336200.1 | Wheat | endoplasmic reticulum | 88.5 | 88.5 |
| HORVU5Hr1G084010.1 | Barley | endoplasmic reticulum, extracellular | 87.38 | 87.38 |
| TraesCS5A01G330400.1 | Wheat | golgi | 87.2 | 87.2 |
| TraesCS5B01G330600.1 | Wheat | endoplasmic reticulum | 88.68 | 86.44 |
| Zm00001d022625_P006 | Maize | cytosol, peroxisome, plastid | 96.1 | 81.06 |
| TraesCS5B01G330500.1 | Wheat | cytosol | 43.41 | 79.59 |
| TraesCS5D01G336100.1 | Wheat | cytosol | 45.45 | 79.29 |
| Os01t0819200-00 | Rice | endoplasmic reticulum, extracellular | 44.53 | 78.69 |
| HORVU5Hr1G084020.3 | Barley | cytosol | 30.98 | 76.61 |
| VIT_18s0001g14630.t01 | Wine grape | endoplasmic reticulum, extracellular | 75.7 | 75.7 |
| PGSC0003DMT400015793 | Potato | endoplasmic reticulum | 74.21 | 74.21 |
| Solyc01g111520.2.1 | Tomato | nucleus | 73.84 | 73.84 |
| KRH29282 | Soybean | endoplasmic reticulum | 73.1 | 73.1 |
| VIT_03s0038g02330.t01 | Wine grape | endoplasmic reticulum | 72.17 | 72.17 |
| KRH24304 | Soybean | endoplasmic reticulum | 72.17 | 72.17 |
| KRH05967 | Soybean | endoplasmic reticulum, extracellular | 71.99 | 72.12 |
| KRH17448 | Soybean | mitochondrion | 71.8 | 71.93 |
| KRH51399 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 70.69 | 71.08 |
| PGSC0003DMT400075422 | Potato | endoplasmic reticulum, extracellular | 70.69 | 70.69 |
| Solyc12g089330.1.1 | Tomato | endoplasmic reticulum, extracellular | 68.09 | 69.9 |
| CDX81995 | Canola | endoplasmic reticulum, extracellular | 69.57 | 69.32 |
| Bra031157.1-P | Field mustard | endoplasmic reticulum, extracellular | 69.39 | 69.13 |
| CDY13846 | Canola | endoplasmic reticulum, extracellular | 69.39 | 69.13 |
| AT1G20080.3 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 67.53 | 67.78 |
| CDY43415 | Canola | endoplasmic reticulum, extracellular | 67.53 | 67.66 |
| Bra016478.1-P | Field mustard | endoplasmic reticulum, extracellular | 63.45 | 67.19 |
| CDY54339 | Canola | endoplasmic reticulum, extracellular | 68.27 | 67.03 |
| CDY62938 | Canola | endoplasmic reticulum, extracellular | 68.27 | 67.03 |
| CDY57593 | Canola | endoplasmic reticulum, extracellular | 67.53 | 65.94 |
| Bra012209.1-P | Field mustard | cytosol | 46.75 | 65.28 |
| AT2G20990.3 | Thale cress | endoplasmic reticulum, extracellular | 69.39 | 64.59 |
| AT2G21010.1 | Thale cress | cytosol | 28.39 | 59.77 |
| EER88839 | Sorghum | endoplasmic reticulum, extracellular | 51.76 | 52.05 |
| KXG36798 | Sorghum | cytosol | 27.27 | 29.34 |
| EES11541 | Sorghum | extracellular, golgi | 28.76 | 26.91 |
| EER96263 | Sorghum | mitochondrion, plasma membrane | 25.23 | 26.77 |
| AT2G21040.1 | Thale cress | cytosol | 12.8 | 26.44 |
| EER93061 | Sorghum | endoplasmic reticulum, mitochondrion | 24.68 | 26.39 |
| EER92549 | Sorghum | endoplasmic reticulum, extracellular | 24.12 | 25.44 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:5.8.1.2 | EntrezGene:8063320 | InterPro:C2_dom | InterPro:C2_domain_sf | UniProt:C5X6V5 |
| ProteinID:EER97096.2 | EnsemblPlants:EER99265 | ProteinID:EER99265 | ProteinID:EER99265.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR000008 | InterPro:IPR031468 | InterPro:IPR035892 | PFAM:PF00168 | PFAM:PF17047 |
| PRINTS:PR00360 | PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF50 | SMART:SM00239 |
| InterPro:SMP_LBD | EnsemblPlantsGene:SORBI_3002G279500 | SUPFAM:SSF49562 | unigene:Sbi.20803 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix |
| UniParc:UPI0001A83D88 | RefSeq:XP_002462744.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:66127573..66134004
Molecular Weight (calculated)
61239.4 Da
IEP (calculated)
6.169
GRAVY (calculated)
-0.300
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVISTVLGF SGFGFGFSAG IVIGYFLFIY VQPTDVKDVK VRPLVEYDSK SLEGILPEIP LWVKNPDYDR IDWLNRFLEL MWPYLDKAIC RTAQDIAKPI
101: IAENTAKYKI DSVEFETLTL GSLPPTFQGM KVYVTEEQEL IMEPSLKWAA NPNITVVVKA YGLKATIQIV DLQVFASPRI TLKPLVPTFP CFAKILVSLM
201: EKPHVDFGLK LLGADVMAIP GLYRFVQETI KKQVASMYLW PKTLEVPIMD PSKASKRPVG ILLVKVVRAQ NLRKKDLLGK SDPYVKLKMS DDKLPSKKTT
301: VKRSNLNPEW NEDFKFVVTD PENQALEVDV FDWEQVGKHE KMGMNMIPLR ELPPEETKVT TVNLLKTMDP NDVQNEKSRG ELTLELTYKP FKEEDMEKED
401: TESADVIEKA PDGTPAGGGL LYVIVHEAQD LEGKHHTNPY AKIIFKGEEK KTKVIKKNRD PRWEDEFEFV CEEPPVNDKL HVEVLSKAGK KGLIHGKETL
501: GYIDISLADV ISNKRINEKY HLIDSKNGQI QIELQWRTS
101: IAENTAKYKI DSVEFETLTL GSLPPTFQGM KVYVTEEQEL IMEPSLKWAA NPNITVVVKA YGLKATIQIV DLQVFASPRI TLKPLVPTFP CFAKILVSLM
201: EKPHVDFGLK LLGADVMAIP GLYRFVQETI KKQVASMYLW PKTLEVPIMD PSKASKRPVG ILLVKVVRAQ NLRKKDLLGK SDPYVKLKMS DDKLPSKKTT
301: VKRSNLNPEW NEDFKFVVTD PENQALEVDV FDWEQVGKHE KMGMNMIPLR ELPPEETKVT TVNLLKTMDP NDVQNEKSRG ELTLELTYKP FKEEDMEKED
401: TESADVIEKA PDGTPAGGGL LYVIVHEAQD LEGKHHTNPY AKIIFKGEEK KTKVIKKNRD PRWEDEFEFV CEEPPVNDKL HVEVLSKAGK KGLIHGKETL
501: GYIDISLADV ISNKRINEKY HLIDSKNGQI QIELQWRTS
001: MGFFSTILGF CGFGVGISLG LVIGYVLFVY LLPNDVKDPE IRSIADQDPK AMLRMLPEIP LWVKNPDFDR VDWINRFLEY MWPYLDKAIC KTAKNIAKPI
101: IEEQIPKYKI DSVEFETLTL GSLPPTFQGM KVYLTDEKEL IMEPCLKWAA NPNILVAIKA FGLKATVQVV DLQVFAQPRI TLKPLVPSFP CFANIYVSLM
201: EKPHVDFGLK LGGADLMSIP GLYRFVQEQI KDQVANMYLW PKTLVVPILD PAKAFRRPVG IVHVKVVRAV GLRKKDLMGG ADPFVKIKLS EDKIPSKKTT
301: VKHKNLNPEW NEEFKFSVRD PQTQVLEFSV YDWEQVGNPE KMGMNVLALK EMVPDEHKAF TLELRKTLDG GEDGQPPDKY RGKLEVELLY KPFTEEEMPK
401: GFEETQAVQK APEGTPAAGG MLVVIVHSAE DVEGKHHTNP YVRIYFKGEE RKTKHVKKNR DPRWNEEFTF MLEEPPVREK LHVEVLSTSS RIGLLHPKET
501: LGYVDIPVVD VVNNKRMNQK FHLIDSKNGK IQIELEWRTA S
101: IEEQIPKYKI DSVEFETLTL GSLPPTFQGM KVYLTDEKEL IMEPCLKWAA NPNILVAIKA FGLKATVQVV DLQVFAQPRI TLKPLVPSFP CFANIYVSLM
201: EKPHVDFGLK LGGADLMSIP GLYRFVQEQI KDQVANMYLW PKTLVVPILD PAKAFRRPVG IVHVKVVRAV GLRKKDLMGG ADPFVKIKLS EDKIPSKKTT
301: VKHKNLNPEW NEEFKFSVRD PQTQVLEFSV YDWEQVGNPE KMGMNVLALK EMVPDEHKAF TLELRKTLDG GEDGQPPDKY RGKLEVELLY KPFTEEEMPK
401: GFEETQAVQK APEGTPAAGG MLVVIVHSAE DVEGKHHTNP YVRIYFKGEE RKTKHVKKNR DPRWNEEFTF MLEEPPVREK LHVEVLSTSS RIGLLHPKET
501: LGYVDIPVVD VVNNKRMNQK FHLIDSKNGK IQIELEWRTA S
Arabidopsis Description
SYTASynaptotagmin A [Source:UniProtKB/TrEMBL;Acc:F4IFM6]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.