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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:
  • plastid 4
  • cytosol 2
  • nucleus 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
TargetP:mitochondrion
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0819200-00 Rice endoplasmic reticulum, extracellular 54.78 20.66
Os09t0538800-01 Rice plasma membrane 60.0 12.8
PGSC0003DMT400015793 Potato endoplasmic reticulum 48.7 10.39
Solyc01g111520.2.1 Tomato nucleus 47.83 10.2
Os02t0448400-01 Rice plasma membrane 46.09 9.85
VIT_03s0038g02330.t01 Wine grape endoplasmic reticulum 44.35 9.46
CDX81995 Canola endoplasmic reticulum, extracellular 43.48 9.24
KRH51399 Soybean endoplasmic reticulum, extracellular, plasma membrane 42.61 9.14
KRH24304 Soybean endoplasmic reticulum 42.61 9.09
KRH29282 Soybean endoplasmic reticulum 42.61 9.09
CDY13846 Canola endoplasmic reticulum, extracellular 42.61 9.06
Bra031157.1-P Field mustard endoplasmic reticulum, extracellular 42.61 9.06
AT2G20990.3 Thale cress endoplasmic reticulum, extracellular 43.48 8.64
Os06t0685300-00 Rice endoplasmic reticulum, extracellular 30.43 6.48
Os03t0251600-00 Rice plasma membrane 14.78 3.22
Os07t0409100-01 Rice plasma membrane 13.04 2.91
AT2G21010.1 Thale cress cytosol 0.87 0.39
AT2G21040.1 Thale cress cytosol 0.87 0.38
Os04t0644800-01 Rice cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Os01t0819300-01EnsemblPlantsGene:Os01g0819300PANTHER:PTHR10774PANTHER:PTHR10774:SF50ProteinID:BAS74957.1SEG:seg
UniParc:UPI0000DD8DB4UniProt:A0A0P0V9L7MapMan:35.1:::
Description
Similar to calcium lipid binding protein-like. (Os01t0819300-01)
Coordinates
chr1:-:34911566..34913753
Molecular Weight (calculated)
13165.6 Da
IEP (calculated)
6.669
GRAVY (calculated)
-0.570
Length
115 amino acids
Sequence
(BLAST)
001: ERHPPTAYGP PSPRRRLSFP RRIPGFGFPS ARDESHGHHA IGGRFETEDV KVCPLVEYDS NSLDGILHEI PLWVKNPDCD RIDWVSRFLE MMWPYLNKAI
101: CKTAQDIANP IIAEN
Best Arabidopsis Sequence Match ( AT1G20080.1 )
(BLAST)
001: MGIISTILGV IGFGFGTTIG IVIGYYLFIY FQSTDVEDPE IKPLVELDSE TIATMFPEIP MWVKNPDFDR IDWLNKLIGH MWPYMDKAIC KMAKSIAKPI
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS
Arabidopsis Description
SYT2Synaptotagmin-2 [Source:UniProtKB/Swiss-Prot;Acc:B6ETT4]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.