Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0819200-00 | Rice | endoplasmic reticulum, extracellular | 0.93 | 0.33 |
| Os01t0819300-01 | Rice | cytosol, mitochondrion, plastid | 0.0 | 0.0 |
| Os02t0448400-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Os03t0251600-00 | Rice | plasma membrane | 0.0 | 0.0 |
| Os06t0685300-00 | Rice | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| Os07t0409100-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Os09t0538800-01 | Rice | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os04t0644800-01 | EnsemblPlantsGene:Os04g0644800 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:IPR000644 | PANTHER:PTHR11689 |
| PANTHER:PTHR11689:SF66 | PFAM:PF00571 | PFscan:PS51371 | ProteinID:BAS91304.1 | SEG:seg | SUPFAM:SSF54631 |
| UniParc:UPI000393B25F | UniProt:A0A0P0WFJ7 | MapMan:35.1 | : | : | : |
Description
CYSTATHIONINE B-SYNTHASE DOMAIN CONTAINING CHLORIDE CHANNEL PROTEIN 5Similar to Chloride channel-like protein Osclc. (Os04t0644800-01)
Coordinates
chr4:+:32824363..32825367
Molecular Weight (calculated)
12416.3 Da
IEP (calculated)
10.152
GRAVY (calculated)
-0.051
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: GKHDRIEEIE FSAEELEMFV DLHPFTNTSP YTVVETMSLA KAHVLFREVG LRHLLVLPKS SKRAPVVGIL TRHDFMPEHI LGLHPFLFKT RWKKVRFGKS
101: AFTNLVF
101: AFTNLVF
001: MPNSTTEDSV AVPLLPSLRR ATNSTSQVAI VGANVCPIES LDYEIAENDF FKQDWRGRSK VEIFQYVFMK WLLCFCIGII VSLIGFANNL AVENLAGVKF
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS
Arabidopsis Description
CLC-GPutative chloride channel-like protein CLC-g [Source:UniProtKB/Swiss-Prot;Acc:P60300]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.