Factsheet for TraesCS3B01G154000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G136900.1	Wheat	endoplasmic reticulum	98.6	98.6
TraesCS3A01G136100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	97.41	97.41
TraesCS4B01G365100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	92.42	92.6
EER98460	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	90.22	90.22
Zm00001d009858_P002	Maize	plasma membrane	89.42	89.42
Os05t0320700-02	Rice	plasma membrane	88.22	88.4
Zm00001d037849_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	88.42	87.38
GSMUA_Achr7P18320_001	Banana	extracellular, golgi	73.65	76.72
GSMUA_Achr9P04840_001	Banana	extracellular	70.06	76.3
GSMUA_Achr6P08670_001	Banana	mitochondrion	55.09	75.62
TraesCS3B01G375100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	76.05	75.3
GSMUA_Achr10P...	Banana	cytosol	52.1	74.79
TraesCS2B01G317700.1	Wheat	endoplasmic reticulum, golgi	40.72	63.16
HORVU3Hr1G025920.2	Barley	plastid	77.25	62.93
TraesCS7B01G299500.1	Wheat	endoplasmic reticulum, golgi, vacuole	60.68	57.14
TraesCS2B01G182500.1	Wheat	plasma membrane	60.48	56.95

Protein Annotations

Gene3D:1.10.630.10	MapMan:9.2.1.2	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF65	SUPFAM:SSF48264	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3B01G154000	EnsemblPlants:TraesCS3B01G154000.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3B:+:146550933..146554320

Molecular Weight (calculated)

56814.5 Da

IEP (calculated)

9.265

GRAVY (calculated)

-0.074

Length

501 amino acids

Sequence
(BLAST)

001: MDVLLLEKAL LGLFAAAVLA IAVAKLTGKR FRLPPGPSGA PIVGNWLQVG DDLNHRNLMG LAKRFGEVFL LRMGVRNLVV VSSPELAKEV LHTQGVEFGS
101: RTRNVVFDIF TGKGQDMVFT VYGDHWRKMR RIMTVPFFTN KVVAQNRVGW EEEARLVVGD LKADPAAATA GVVVRRRLQL MMYNDMFRIM FDRRFESVAD
201: PLFNQLKALN AERSILSQSF DYNYGDFIPV LRPFLRRYLN RCTNLKTKRM KVFEDHFVQQ RKEALEKTGE IRCAMDHILE AERKGEINHD NVLYIVENIN
301: VAAIETTLWS IEWGLAELVN HPEIQQKLRE EIVAVLGAGV AVTEPDLERL PYLQSVVKET LRLRMAIPLL VPHMNLSDAK LAGYDIPAES KILVNAWFLA
401: NDPKRWVRAD EFRPERFLEE EKAVEAHGND FRFVPFGVGR RSCPGIILAL PIIGITLGRL VQNFQLLPPP GQDKIDTTEK PGQFSNQILK HATIVCKPLE
501: A

Best Arabidopsis Sequence Match ( AT2G30490.1 )
(BLAST)

001: MDLLLLEKSL IAVFVAVILA TVISKLRGKK LKLPPGPIPI PIFGNWLQVG DDLNHRNLVD YAKKFGDLFL LRMGQRNLVV VSSPDLTKEV LLTQGVEFGS
101: RTRNVVFDIF TGKGQDMVFT VYGEHWRKMR RIMTVPFFTN KVVQQNREGW EFEAASVVED VKKNPDSATK GIVLRKRLQL MMYNNMFRIM FDRRFESEDD
201: PLFLRLKALN GERSRLAQSF EYNYGDFIPI LRPFLRGYLK ICQDVKDRRI ALFKKYFVDE RKQIASSKPT GSEGLKCAID HILEAEQKGE INEDNVLYIV
301: ENINVAAIET TLWSIEWGIA ELVNHPEIQS KLRNELDTVL GPGVQVTEPD LHKLPYLQAV VKETLRLRMA IPLLVPHMNL HDAKLAGYDI PAESKILVNA
401: WWLANNPNSW KKPEEFRPER FFEEESHVEA NGNDFRYVPF GVGRRSCPGI ILALPILGIT IGRMVQNFEL LPPPGQSKVD TSEKGGQFSL HILNHSIIVM
501: KPRNC

Arabidopsis Description

CYP73A5Cinnamate-4-hydroxylase [Source:UniProtKB/TrEMBL;Acc:B1GV49]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.