CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 6
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89811
EER90047
EER90546
EER91363
EER91417
EER92117
EER93094
EER93095
EER93976
EER95554
EER99265
EES01786
EES03803	endoplasmic reticulum
EES05839
EES12559
EES14570
EES15681
EES19841
KXG23118
KXG28720
KXG31128
KXG31516
KXG33320
KXG34930
OQU84758
OQU88871
OQU90653
OQU92056

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30490.1	EER95554	AT1G20330.1	23175744
AT2G30490.1	EER90047	AT1G51570.1	23175744
AT2G30490.1	EER89811	AT1G64090.2	23175744
AT2G30490.1	EES19841	AT1G64090.2	23175744
AT2G30490.1	KXG31516	AT1G64090.2	23175744
AT2G30490.1	KXG33320	AT1G64090.2	23175744
AT2G30490.1	OQU84758	AT1G64090.2	23175744
AT2G30490.1	EER92117	AT2G03510.1	23175744
AT2G30490.1	EER99265	AT2G20990.3	23175744
AT2G30490.1	OQU92056	AT2G20990.3	23175744
AT2G30490.1	EES03803	AT2G30490.1	23175744
AT2G30490.1	EES03803	AT2G30490.1	23175744
AT2G30490.1	EES12559	AT2G45140.1	23175744
AT2G30490.1	EES14570	AT2G45140.1	23175744
AT2G30490.1	KXG31128	AT2G45140.1	23175744
AT2G30490.1	EER89811	AT2G46170.1	23175744
AT2G30490.1	EES19841	AT2G46170.1	23175744
AT2G30490.1	KXG31516	AT2G46170.1	23175744
AT2G30490.1	KXG33320	AT2G46170.1	23175744
AT2G30490.1	OQU84758	AT2G46170.1	23175744
AT2G30490.1	EER90546	AT3G26830.1	23175744
AT2G30490.1	EER93094	AT3G26830.1	23175744
AT2G30490.1	EER93095	AT3G26830.1	23175744
AT2G30490.1	KXG23118	AT3G26830.1	23175744
AT2G30490.1	KXG28720	AT3G26830.1	23175744
AT2G30490.1	KXG34930	AT3G26830.1	23175744
AT2G30490.1	OQU88871	AT3G26830.1	23175744
AT2G30490.1	OQU90653	AT3G26830.1	23175744
AT2G30490.1	EER93976	AT3G48890.1	23175744
AT2G30490.1	EES01786	AT5G22460.1	23175744
AT2G30490.1	EES15681	AT5G22460.1	23175744
AT2G30490.1	EER89811	AT5G41600.1	23175744
AT2G30490.1	EES19841	AT5G41600.1	23175744
AT2G30490.1	KXG31516	AT5G41600.1	23175744
AT2G30490.1	KXG33320	AT5G41600.1	23175744
AT2G30490.1	OQU84758	AT5G41600.1	23175744
AT2G30490.1	EER91417	AT5G52240.1	23175744
AT2G30490.1	EES05839	AT5G52240.1	23175744
AT2G30490.1	EER91363	AT5G53560.1	23175744

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012510_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	71.88	94.53
HORVU3Hr1G080830.1	Barley	endoplasmic reticulum	91.68	91.68
TraesCS3A01G342900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	89.9	89.72
PGSC0003DMT400078288	Potato	cytosol	54.85	86.56
KRH17200	Soybean	endoplasmic reticulum	84.55	84.55
KRH72830	Soybean	endoplasmic reticulum	84.55	84.39
PGSC0003DMT400078290	Potato	endoplasmic reticulum, golgi	83.96	83.96
CDX84829	Canola	extracellular, golgi, plasma membrane	82.97	82.97
VIT_06s0004g08150.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	82.77	82.77
CDY29670	Canola	extracellular, golgi, plasma membrane	82.57	82.57
CDY23995	Canola	extracellular, golgi, plasma membrane	82.57	82.57
CDY10741	Canola	extracellular, golgi, plasma membrane	82.57	82.57
Bra018311.1-P	Field mustard	extracellular, golgi, plasma membrane	82.57	82.57
CDX97826	Canola	extracellular, golgi, plasma membrane	82.57	82.57
Bra022803.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	82.38	82.38
CDY02068	Canola	extracellular, golgi, plasma membrane	82.18	82.18
Bra021637.1-P	Field mustard	extracellular, golgi, plasma membrane	82.18	82.18
AT2G30490.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	81.98	81.98
TraesCS2D01G300200.1	Wheat	endoplasmic reticulum	80.99	80.83
TraesCS2B01G317700.1	Wheat	endoplasmic reticulum, golgi	49.7	77.71
CDX84830	Canola	endoplasmic reticulum, golgi, plasma membrane	76.63	76.94
CDY23996	Canola	endoplasmic reticulum, extracellular, plasma membrane	73.27	76.92
Bra021636.1-P	Field mustard	extracellular, golgi, plasma membrane	76.63	76.63
CDY29671	Canola	extracellular, golgi, plasma membrane	76.44	76.44
CDX97827	Canola	endoplasmic reticulum, golgi, plasma membrane	76.24	76.24
Bra022802.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	75.84	76.14
EER98460	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	75.45	76.05
EES05020	Sorghum	plasma membrane	63.56	60.57
Os01t0820000-00	Rice	plasma membrane	32.28	48.95

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:8085395	MapMan:9.2.1.2	UniProt:C5XN98	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	EnsemblPlants:EES03803	ProteinID:EES03803	ProteinID:EES03803.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005515	GO:GO:0005575
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005783	GO:GO:0005794	GO:GO:0005886	GO:GO:0006744	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009505	GO:GO:0009506	GO:GO:0009555	GO:GO:0009628
GO:GO:0009698	GO:GO:0009808	GO:GO:0009987	GO:GO:0016020	GO:GO:0016491	GO:GO:0016705
GO:GO:0016710	GO:GO:0019748	GO:GO:0020037	GO:GO:0030312	GO:GO:0032502	GO:GO:0042802
GO:GO:0044550	GO:GO:0046872	GO:GO:0055114	GO:GO:0080167	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF56	EnsemblPlantsGene:SORBI_3003G337400
SUPFAM:SSF48264	UniParc:UPI0001A857FB	RefSeq:XP_002458683.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:66049426..66052170

Molecular Weight (calculated)

57906.6 Da

IEP (calculated)

9.000

GRAVY (calculated)

-0.183

Length

505 amino acids

Sequence
(BLAST)

001: MDLLFVEKLL VGLFASVVVA IAVSKMRGRK LRLPPGPVPV PIFGNWLQVG DDLNHRNLAA LARKFGDIFL LRMGQRNLVV VSSPPLAREV LHTQGVEFGS
101: RTRNVVFDIF TGEGQDMVFT VYGDHWRKMR RIMTVPFFTN KVVQQYRHGW EAEAAAVVDD VRADPAAATE GVVLRRRLQL MMYNNMYRIM FDRRFESMDD
201: PLFLRLRALN GERSRLAQSF EYNYGDFIPI LRPFLRGYLR ICKEVKETRL KLFKDFFLEE RKKLASTKAV DSNGLKCAID HILEAQQKGE INEDNVLYIV
301: ENINVAAIET TLWSIEWAIA ELVNHPEIQQ KLRQELDTVL APGQQITEPD THNLPYLQAV IKETLRLRMA IPLLVPHMNL HDAKLGGYDI PAESKILVNA
401: WYLANNPESW KRPEEFRPER FLEEEKHVEA NGNDFRYLPF GVGRRSCPGI ILALPILGIT IGRLVQNFEL LPPPGQDKLD TTEKGGQFSL HILKHSNIVC
501: KPRTF

Best Arabidopsis Sequence Match ( AT2G30490.1 )
(BLAST)

001: MDLLLLEKSL IAVFVAVILA TVISKLRGKK LKLPPGPIPI PIFGNWLQVG DDLNHRNLVD YAKKFGDLFL LRMGQRNLVV VSSPDLTKEV LLTQGVEFGS
101: RTRNVVFDIF TGKGQDMVFT VYGEHWRKMR RIMTVPFFTN KVVQQNREGW EFEAASVVED VKKNPDSATK GIVLRKRLQL MMYNNMFRIM FDRRFESEDD
201: PLFLRLKALN GERSRLAQSF EYNYGDFIPI LRPFLRGYLK ICQDVKDRRI ALFKKYFVDE RKQIASSKPT GSEGLKCAID HILEAEQKGE INEDNVLYIV
301: ENINVAAIET TLWSIEWGIA ELVNHPEIQS KLRNELDTVL GPGVQVTEPD LHKLPYLQAV VKETLRLRMA IPLLVPHMNL HDAKLAGYDI PAESKILVNA
401: WWLANNPNSW KKPEEFRPER FFEEESHVEA NGNDFRYVPF GVGRRSCPGI ILALPILGIT IGRMVQNFEL LPPPGQSKVD TSEKGGQFSL HILNHSIIVM
501: KPRNC

Arabidopsis Description

CYP73A5Cinnamate-4-hydroxylase [Source:UniProtKB/TrEMBL;Acc:B1GV49]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.