CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
endoplasmic reticulum 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047292_P001	Maize	endoplasmic reticulum, plastid	96.24	96.5
Zm00001d029534_P001	Maize	plastid	96.24	86.47
TraesCS4D01G154700.1	Wheat	plastid	81.72	83.06
TraesCS4B01G152900.1	Wheat	plastid	81.18	82.51
TraesCS4A01G144000.1	Wheat	plastid	80.91	82.24
HORVU4Hr1G039810.2	Barley	plastid	81.18	77.44
KRG89480	Soybean	plastid	68.01	70.08
GSMUA_Achr4P14350_001	Banana	cytosol	73.66	69.54
Solyc05g012340.2.1	Tomato	nucleus	67.47	69.53
CDY65417	Canola	cytosol, endoplasmic reticulum, peroxisome	64.78	69.45
KRH50516	Soybean	plastid	67.74	69.23
AT2G03510.1	Thale cress	endoplasmic reticulum, peroxisome, plastid	64.52	67.42
PGSC0003DMT400072932	Potato	golgi, peroxisome, plastid	64.78	67.32
CDY45557	Canola	endoplasmic reticulum, peroxisome, plastid	64.52	67.04
VIT_01s0011g00540.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	67.74	66.49
Bra017383.1-P	Field mustard	cytosol, golgi, peroxisome	64.52	66.48
CDY04155	Canola	endoplasmic reticulum, peroxisome, plastid	64.52	66.48
Os03t0421400-01	Rice	plasma membrane	22.31	63.85

Protein Annotations

MapMan:35.2	EntrezGene:8066287	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	UniProt:C5WWI9	EnsemblPlants:EER92117
ProteinID:EER92117	ProteinID:EER92117.1	InterPro:Erlin1/2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005783	GO:GO:0005789	GO:GO:0005794	GO:GO:0006139
GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289
GO:GO:0009056	GO:GO:0009058	GO:GO:0009506	GO:GO:0009987	GO:GO:0015485	GO:GO:0016020
GO:GO:0019538	GO:GO:0030433	GO:GO:0031625	GO:GO:0032933	PFAM:PF01145	PANTHER:PTHR15351
PANTHER:PTHR15351:SF3	SMART:SM00244	EnsemblPlantsGene:SORBI_3001G335000	SUPFAM:SSF117892	unigene:Sbi.5447	UniParc:UPI0001A82063
RefSeq:XP_002465119.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:62373931..62381301

Molecular Weight (calculated)

42461.2 Da

IEP (calculated)

7.283

GRAVY (calculated)

-0.446

Length

372 amino acids

Sequence
(BLAST)

001: MSDVTSADSA PNRRSPPPPS PSPSMPRFQQ QPSGRQPPPP GADPFAFGVV AFIGICFVLI SLSAPSSVLH QVPEGHVGVY WRGGALLKTI TPPGFHLKLP
101: LITQYEPIQV TLQTDQVRDI PCGTKGGVMI SFDKIEVVNR LRKEFVHETL LNYGVHYDKT WIYDKIHHEI NQFCSAHSLQ QVYIDMFDQI DETMKEAIQR
201: DCTRYAPGIE IISVRVTKPN IPGSIRRNFE LMEEERTKAL IAIEKQKVAE KEAETQKKIA LSEAEKNAQV SKILMEQKLM EKDSSKRQEQ IDNEMYLARE
301: KALADANYYR ILKEAEANRL KLTPEYLELR FIESIANNSK IFFGEKIPSM IMDQRLLKNY LDAVPRKDHY EM

Best Arabidopsis Sequence Match ( AT2G03510.1 )
(BLAST)

001: MDAQQRRTDI PRAPPVGEPG GDISSILIAF GVFAAIAALV MFPSSLVHQV PEGHVGAYWR GGALLNIITE PGFHLKLPFI TNYEPVQVTL QTDQVRDIPC
101: GTKGGVLITF EKIEVVNRLR KDFVYDTLLN YGVNYDNTWI YDKIHHEINQ FCSSHSLQQV YIDIFDQIDE RMKDALQADC TRYAPGIEIL SVRVTKPKIP
201: ESVRRNFEQM EEERTKVLIA IEKQRVAEKE AETKKIMAIS EAEKNANVSK ILMQQKLTEK DSSRREADIE NQMYLDRQKS LADADYYRVL REAEANKLKL
301: TPEFLELKFI DAIARNTKIF FGDKVPNMVL DQRLLGNFLN HSTKDKDGSL EMATDT

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ87]
SUBAcon: [endoplasmic reticulum,plastid,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.