CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, peroxisome

Predictor Summary:

plastid 2
endoplasmic reticulum 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plastid
Any Predictor:	endoplasmic reticulum, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04155	Canola	endoplasmic reticulum, peroxisome, plastid	98.6	97.78
CDY65417	Canola	cytosol, endoplasmic reticulum, peroxisome	89.11	91.93
AT2G03510.1	Thale cress	endoplasmic reticulum, peroxisome, plastid	90.5	91.01
KRG89480	Soybean	plastid	74.3	73.68
KRH50516	Soybean	plastid	74.86	73.63
Solyc05g012340.2.1	Tomato	nucleus	73.18	72.58
PGSC0003DMT400072932	Potato	golgi, peroxisome, plastid	70.95	70.95
VIT_01s0011g00540.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	71.79	67.81
Zm00001d047292_P001	Maize	endoplasmic reticulum, plastid	67.32	64.96
TraesCS4A01G144000.1	Wheat	plastid	66.2	64.75
EER92117	Sorghum	plastid	67.04	64.52
TraesCS4B01G152900.1	Wheat	plastid	65.92	64.48
TraesCS4D01G154700.1	Wheat	plastid	65.92	64.48
GSMUA_Achr4P14350_001	Banana	cytosol	67.32	61.17
HORVU4Hr1G039810.2	Barley	plastid	65.92	60.51
Zm00001d029534_P001	Maize	plastid	66.76	57.73
Os03t0421400-01	Rice	plasma membrane	12.29	33.85

Protein Annotations

MapMan:35.2	GO:A0A078I646	UniProt:A0A078I646	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	EnsemblPlants:CDY45557
ProteinID:CDY45557	ProteinID:CDY45557.1	InterPro:Erlin1/2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0019538	GO:GO:0030433	GO:GO:0031625	EnsemblPlantsGene:GSBRNA2T00082270001	PFAM:PF01145	PANTHER:PTHR15351
PANTHER:PTHR15351:SF3	SMART:SM00244	SUPFAM:SSF117892	TMHMM:TMhelix	UniParc:UPI0004EE4ADC	SEG:seg

Description

BnaC09g21530DBnaC09g21530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I646]

Coordinates

chrLK032628:-:53663..55831

Molecular Weight (calculated)

40823.8 Da

IEP (calculated)

5.528

GRAVY (calculated)

-0.469

Length

358 amino acids

Sequence
(BLAST)

001: MDPQQRRTET GPRPPVGEPG GDVTSIFIAF GVFIAIAALV MSPSSLVHQV PEGHVGAYWR GGALLNIITE PGFHVKLPFI TNYEPVQVTL QTDQVKDIPC
101: GTKGGVMITF EKIEVVNRLR KDYVYDTLLN YGVDYDNTWI YDKIHHEINQ FCSSHSLQQV YIDIFDQIDE RMKEALQADC TRYAPGIEII SVRVTKPKIP
201: ESVRRNFEQM EEERTKVLIA IEKQRVAEKE AETKKIMAIS EAEKNANVSK ILMEQKLTEK DSARREADIE NQMYLDRQKS LADADYYRVL KEAEANKLKL
301: TPEFLELKFI DAIARNTKMF FGDKVPNMVL DQRLLGNFLN HSTKDKSNDG NSERATDS

Best Arabidopsis Sequence Match ( AT2G03510.1 )
(BLAST)

001: MDAQQRRTDI PRAPPVGEPG GDISSILIAF GVFAAIAALV MFPSSLVHQV PEGHVGAYWR GGALLNIITE PGFHLKLPFI TNYEPVQVTL QTDQVRDIPC
101: GTKGGVLITF EKIEVVNRLR KDFVYDTLLN YGVNYDNTWI YDKIHHEINQ FCSSHSLQQV YIDIFDQIDE RMKDALQADC TRYAPGIEIL SVRVTKPKIP
201: ESVRRNFEQM EEERTKVLIA IEKQRVAEKE AETKKIMAIS EAEKNANVSK ILMQQKLTEK DSSRREADIE NQMYLDRQKS LADADYYRVL REAEANKLKL
301: TPEFLELKFI DAIARNTKIF FGDKVPNMVL DQRLLGNFLN HSTKDKDGSL EMATDT

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ87]
SUBAcon: [endoplasmic reticulum,plastid,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.