CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
endoplasmic reticulum 1
nucleus 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50516	Soybean	plastid	95.01	94.23
CDY65417	Canola	cytosol, endoplasmic reticulum, peroxisome	73.13	76.08
AT2G03510.1	Thale cress	endoplasmic reticulum, peroxisome, plastid	73.96	75.0
CDY45557	Canola	endoplasmic reticulum, peroxisome, plastid	73.68	74.3
Bra017383.1-P	Field mustard	cytosol, golgi, peroxisome	73.96	73.96
CDY04155	Canola	endoplasmic reticulum, peroxisome, plastid	73.96	73.96
Solyc05g012340.2.1	Tomato	nucleus	73.68	73.68
PGSC0003DMT400072932	Potato	golgi, peroxisome, plastid	70.91	71.51
VIT_01s0011g00540.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	73.13	69.66
Zm00001d047292_P001	Maize	endoplasmic reticulum, plastid	70.08	68.19
EER92117	Sorghum	plastid	70.08	68.01
TraesCS4B01G152900.1	Wheat	plastid	67.59	66.67
TraesCS4D01G154700.1	Wheat	plastid	67.59	66.67
TraesCS4A01G144000.1	Wheat	plastid	67.04	66.12
GSMUA_Achr4P14350_001	Banana	cytosol	70.08	64.21
HORVU4Hr1G039810.2	Barley	plastid	66.76	61.79
Zm00001d029534_P001	Maize	plastid	69.25	60.39
Os03t0421400-01	Rice	plasma membrane	11.36	31.54

Protein Annotations

EntrezGene:100814351	MapMan:35.2	EMBL:ACUP02012211	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Erlin1/2
EnsemblPlantsGene:GLYMA_20G025600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0006139	GO:GO:0006950
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0015485	GO:GO:0016020	GO:GO:0016021	GO:GO:0019538
GO:GO:0030433	GO:GO:0031625	GO:GO:0032933	UniProt:K7N0Z0	EnsemblPlants:KRG89480	ProteinID:KRG89480
ProteinID:KRG89480.1	PFAM:PF01145	PANTHER:PTHR15351	PANTHER:PTHR15351:SF3	SMART:SM00244	SUPFAM:SSF117892
TMHMM:TMhelix	UniParc:UPI000233DA83	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:2794117..2797172

Molecular Weight (calculated)

41186.9 Da

IEP (calculated)

7.021

GRAVY (calculated)

-0.259

Length

361 amino acids

Sequence
(BLAST)

001: MDSQQRTAAS PRSPPRQGHD STAILFTLLS FFAIVALVLL PSASPFFQNS LSILHQVPEG HVGVYWRGGA LLKTITEPGF HLKMPFLTQY EPVQVTLQTD
101: MVTDIPCGTK GGVMISFGKI EVVNRLRKEF VFETLLNYGV HYDKTWIYDK IHHEINQFCS SHSLQQVYID VFDQIDEKMK DALQVDCTRY APGIEILSVR
201: VTKPTIPESI RRNFEQMEEE RTKVLIAIEK QKVAEKEAET MKKMAISEAE KNANVSKILM EQKLLEKDSA RRQEEIENAM YLAREKSLAD ADFYRVIKEA
301: EANRLKLTPE FLQLKFIQAI ANNTKIFFGD KVPNMILDQR LLGNLLHDVS SGRTMTTKAD I

Best Arabidopsis Sequence Match ( AT2G03510.1 )
(BLAST)

001: MDAQQRRTDI PRAPPVGEPG GDISSILIAF GVFAAIAALV MFPSSLVHQV PEGHVGAYWR GGALLNIITE PGFHLKLPFI TNYEPVQVTL QTDQVRDIPC
101: GTKGGVLITF EKIEVVNRLR KDFVYDTLLN YGVNYDNTWI YDKIHHEINQ FCSSHSLQQV YIDIFDQIDE RMKDALQADC TRYAPGIEIL SVRVTKPKIP
201: ESVRRNFEQM EEERTKVLIA IEKQRVAEKE AETKKIMAIS EAEKNANVSK ILMQQKLTEK DSSRREADIE NQMYLDRQKS LADADYYRVL REAEANKLKL
301: TPEFLELKFI DAIARNTKIF FGDKVPNMVL DQRLLGNFLN HSTKDKDGSL EMATDT

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ87]
SUBAcon: [endoplasmic reticulum,plastid,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.