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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, peroxisome

Predictor Summary:
  • plastid 2
  • endoplasmic reticulum 1
  • mitochondrion 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45557 Canola endoplasmic reticulum, peroxisome, plastid 91.01 90.5
CDY65417 Canola cytosol, endoplasmic reticulum, peroxisome 87.92 90.2
Bra017383.1-P Field mustard cytosol, golgi, peroxisome 90.73 89.47
CDY04155 Canola endoplasmic reticulum, peroxisome, plastid 90.45 89.2
KRG89480 Soybean plastid 75.0 73.96
KRH50516 Soybean plastid 75.56 73.9
Solyc05g012340.2.1 Tomato nucleus 74.72 73.68
PGSC0003DMT400072932 Potato golgi, peroxisome, plastid 72.19 71.79
VIT_01s0011g00540.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 73.88 69.39
Zm00001d047292_P001 Maize endoplasmic reticulum, plastid 67.98 65.23
EER92117 Sorghum plastid 67.42 64.52
TraesCS4A01G144000.1 Wheat plastid 66.29 64.48
TraesCS4B01G152900.1 Wheat plastid 66.29 64.48
TraesCS4D01G154700.1 Wheat plastid 66.01 64.21
GSMUA_Achr4P14350_001 Banana cytosol 67.13 60.66
HORVU4Hr1G039810.2 Barley plastid 66.01 60.26
Zm00001d029534_P001 Maize plastid 67.42 57.97
Os03t0421400-01 Rice plasma membrane 11.52 31.54
Protein Annotations
MapMan:35.2EntrezGene:814880ProteinID:AAD17426.2ProteinID:AEC05709.1ArrayExpress:AT2G03510EnsemblPlantsGene:AT2G03510
RefSeq:AT2G03510TAIR:AT2G03510RefSeq:AT2G03510-TAIR-GEnsemblPlants:AT2G03510.1TAIR:AT2G03510.1EMBL:AY088133
Unigene:At.28248InterPro:Band_7InterPro:Band_7/SPFH_dom_sfInterPro:Erlin1/2GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005730
GO:GO:0005737GO:GO:0005773GO:GO:0005774GO:GO:0005783GO:GO:0005789GO:GO:0005794
GO:GO:0006139GO:GO:0006950GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0008289GO:GO:0009056GO:GO:0009058GO:GO:0009506GO:GO:0009987GO:GO:0015485
GO:GO:0016020GO:GO:0016021GO:GO:0019538GO:GO:0030433GO:GO:0031625GO:GO:0032933
RefSeq:NP_027545.1PFAM:PF01145PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000084
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0005052PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PANTHER:PTHR15351
PANTHER:PTHR15351:SF3UniProt:Q9ZQ87SMART:SM00244SUPFAM:SSF117892TMHMM:TMhelixUniParc:UPI000009FE00
Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ87]
Coordinates
chr2:+:1066578..1069186
Molecular Weight (calculated)
40598.7 Da
IEP (calculated)
5.728
GRAVY (calculated)
-0.374
Length
356 amino acids
Sequence
(BLAST)
001: MDAQQRRTDI PRAPPVGEPG GDISSILIAF GVFAAIAALV MFPSSLVHQV PEGHVGAYWR GGALLNIITE PGFHLKLPFI TNYEPVQVTL QTDQVRDIPC
101: GTKGGVLITF EKIEVVNRLR KDFVYDTLLN YGVNYDNTWI YDKIHHEINQ FCSSHSLQQV YIDIFDQIDE RMKDALQADC TRYAPGIEIL SVRVTKPKIP
201: ESVRRNFEQM EEERTKVLIA IEKQRVAEKE AETKKIMAIS EAEKNANVSK ILMQQKLTEK DSSRREADIE NQMYLDRQKS LADADYYRVL REAEANKLKL
301: TPEFLELKFI DAIARNTKIF FGDKVPNMVL DQRLLGNFLN HSTKDKDGSL EMATDT
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.