Factsheet for Zm00001d047292_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:

plastid 2
mitochondrion 1
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92117	Sorghum	plastid	96.5	96.24
Zm00001d029534_P001	Maize	plastid	96.5	86.47
TraesCS4D01G154700.1	Wheat	plastid	80.86	81.97
TraesCS4B01G152900.1	Wheat	plastid	80.32	81.42
TraesCS4A01G144000.1	Wheat	plastid	80.05	81.15
HORVU4Hr1G039810.2	Barley	plastid	80.05	76.15
Solyc05g012340.2.1	Tomato	nucleus	68.19	70.08
KRG89480	Soybean	plastid	68.19	70.08
KRH50516	Soybean	plastid	68.46	69.78
CDY65417	Canola	cytosol, endoplasmic reticulum, peroxisome	64.69	69.16
GSMUA_Achr4P14350_001	Banana	cytosol	73.05	68.78
AT2G03510.1	Thale cress	endoplasmic reticulum, peroxisome, plastid	65.23	67.98
PGSC0003DMT400072932	Potato	golgi, peroxisome, plastid	65.23	67.6
CDY45557	Canola	endoplasmic reticulum, peroxisome, plastid	64.96	67.32
CDY04155	Canola	endoplasmic reticulum, peroxisome, plastid	64.96	66.76
Bra017383.1-P	Field mustard	cytosol, golgi, peroxisome	64.96	66.76
VIT_01s0011g00540.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	67.66	66.23
Os03t0421400-01	Rice	plasma membrane	21.56	61.54

Protein Annotations

EntrezGene:100382287	MapMan:35.2	ProteinID:AQL06092.1	EMBL:BT063773	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf
UniProt:C0P654	InterPro:Erlin1/2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019538
GO:GO:0030433	GO:GO:0031625	PFAM:PF01145	PANTHER:PTHR15351	PANTHER:PTHR15351:SF3	SMART:SM00244
SUPFAM:SSF117892	TMHMM:TMhelix	UniParc:UPI0001948FFF	EnsemblPlantsGene:Zm00001d047292	EnsemblPlants:Zm00001d047292_P001	EnsemblPlants:Zm00001d047292_T001
SEG:seg	:	:	:	:	:

Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family

Coordinates

chr9:-:125675077..125682757

Molecular Weight (calculated)

42560.4 Da

IEP (calculated)

7.629

GRAVY (calculated)

-0.446

Length

371 amino acids

Sequence
(BLAST)

001: MSDVTSDSAQ SRRSPPPPSP SPSMPRFQQQ PSGRQPPQPG ADSFVFGVFA FIAICFVLIS LSVPSSVLHQ VPEGHVGVYW RGGALLKTIT PPGFHLKLPL
101: ITQYEPIQVT LQTDQVRDIP CGTKGGVMIS FDKIEVVNRL RKEFVHETLL NYGVHYDKTW IYDKIHHEIN QFCSAHSLQQ VYIDMFDQID ETMKEAIQRD
201: CTRYAPGIEI ISVRVTKPNI PGSIRRNFEL MEEERTKALI AIEKQKVAEK EAETQKKIAL SEAEKNAQVS KILMEQKLME KDSSKRQEKI DNEMYLAREK
301: ALADANYYRI LKEAEANRLK LTPEYLELRF IESIANNSKI FFGEKIPNMI MDQRLLKNYL DAVPRKDHYE M

Best Arabidopsis Sequence Match ( AT2G03510.1 )
(BLAST)

001: MDAQQRRTDI PRAPPVGEPG GDISSILIAF GVFAAIAALV MFPSSLVHQV PEGHVGAYWR GGALLNIITE PGFHLKLPFI TNYEPVQVTL QTDQVRDIPC
101: GTKGGVLITF EKIEVVNRLR KDFVYDTLLN YGVNYDNTWI YDKIHHEINQ FCSSHSLQQV YIDIFDQIDE RMKDALQADC TRYAPGIEIL SVRVTKPKIP
201: ESVRRNFEQM EEERTKVLIA IEKQRVAEKE AETKKIMAIS EAEKNANVSK ILMQQKLTEK DSSRREADIE NQMYLDRQKS LADADYYRVL REAEANKLKL
301: TPEFLELKFI DAIARNTKIF FGDKVPNMVL DQRLLGNFLN HSTKDKDGSL EMATDT

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ87]
SUBAcon: [endoplasmic reticulum,plastid,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.