Factsheet for GSMUA_Achr4P14350_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92117	Sorghum	plastid	69.54	73.66
Zm00001d047292_P001	Maize	endoplasmic reticulum, plastid	68.78	73.05
Solyc05g012340.2.1	Tomato	nucleus	65.48	71.47
TraesCS4D01G154700.1	Wheat	plastid	66.24	71.31
TraesCS4B01G152900.1	Wheat	plastid	66.24	71.31
TraesCS4A01G144000.1	Wheat	plastid	65.99	71.04
KRG89480	Soybean	plastid	64.21	70.08
PGSC0003DMT400072932	Potato	golgi, peroxisome, plastid	62.94	69.27
KRH50516	Soybean	plastid	63.71	68.96
CDY65417	Canola	cytosol, endoplasmic reticulum, peroxisome	60.41	68.59
VIT_01s0011g00540.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	65.74	68.34
CDY45557	Canola	endoplasmic reticulum, peroxisome, plastid	61.17	67.32
AT2G03510.1	Thale cress	endoplasmic reticulum, peroxisome, plastid	60.66	67.13
Bra017383.1-P	Field mustard	cytosol, golgi, peroxisome	61.42	67.04
CDY04155	Canola	endoplasmic reticulum, peroxisome, plastid	61.42	67.04
HORVU4Hr1G039810.2	Barley	plastid	66.24	66.92
Zm00001d029534_P001	Maize	plastid	68.78	65.46
Os03t0421400-01	Rice	plasma membrane	13.71	41.54

Protein Annotations

MapMan:35.2	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	ncoils:Coil	InterPro:Erlin1/2	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005783	GO:GO:0005794
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009506	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0019538	GO:GO:0030433	GO:GO:0031625	EnsemblPlantsGene:GSMUA_Achr4G14350_001
EnsemblPlants:GSMUA_Achr4P14350_001	EnsemblPlants:GSMUA_Achr4T14350_001	UniProt:M0SNV0	PFAM:PF01145	PANTHER:PTHR15351	PANTHER:PTHR15351:SF3
SMART:SM00244	SUPFAM:SSF117892	TMHMM:TMhelix	UniParc:UPI0002955D1D	SEG:seg	:

Description

Erlin-2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G14350_001]

Coordinates

chr4:+:10734084..10737571

Molecular Weight (calculated)

44760.6 Da

IEP (calculated)

6.420

GRAVY (calculated)

-0.486

Length

394 amino acids

Sequence
(BLAST)

001: MDPPQGSPQS SPDAQGSRQR PMDASQGLRQ PLMDTPQGSR QPRQQQYQPR RPDPPSGGDG LFNAVVTIFL FVLVVVFLVS SSTTGSSLSV LHQVPEGHVG
101: VYWRGGALLE ATTDPGFHWK LPLITQFEPI QVTIQTDQVR DIPCGTKGGV MISFDKIEVV NRLRKSFVYQ TLHEYGVFYD KTWIYDKIHH EINQFCSAHS
201: LQQVYIDMFD QIDEKVKDSI QADCTRYAPG IEIISVRVTK PNIPVSIKRN FELMEEERTK ALIAIEKQKV AEKEAETQKM IALSEAEKNA QVSQIQMEQK
301: LMEKNSAKRQ EEIENEMYIA REKSQADANF YRVMKEAEAN RLKLTPEFLE LKFIEAIANN SKIFFGEKVP NMVMDQRLLG NYLDGISKKG RGDV

Best Arabidopsis Sequence Match ( AT2G03510.1 )
(BLAST)

001: MDAQQRRTDI PRAPPVGEPG GDISSILIAF GVFAAIAALV MFPSSLVHQV PEGHVGAYWR GGALLNIITE PGFHLKLPFI TNYEPVQVTL QTDQVRDIPC
101: GTKGGVLITF EKIEVVNRLR KDFVYDTLLN YGVNYDNTWI YDKIHHEINQ FCSSHSLQQV YIDIFDQIDE RMKDALQADC TRYAPGIEIL SVRVTKPKIP
201: ESVRRNFEQM EEERTKVLIA IEKQRVAEKE AETKKIMAIS EAEKNANVSK ILMQQKLTEK DSSRREADIE NQMYLDRQKS LADADYYRVL REAEANKLKL
301: TPEFLELKFI DAIARNTKIF FGDKVPNMVL DQRLLGNFLN HSTKDKDGSL EMATDT

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ87]
SUBAcon: [endoplasmic reticulum,plastid,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.