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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • endoplasmic reticulum 1
  • cytosol 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45557 Canola endoplasmic reticulum, peroxisome, plastid 91.93 89.11
CDY04155 Canola endoplasmic reticulum, peroxisome, plastid 92.22 88.64
AT2G03510.1 Thale cress endoplasmic reticulum, peroxisome, plastid 90.2 87.92
KRG89480 Soybean plastid 76.08 73.13
Solyc05g012340.2.1 Tomato nucleus 75.5 72.58
KRH50516 Soybean plastid 74.93 71.43
PGSC0003DMT400072932 Potato golgi, peroxisome, plastid 71.47 69.27
VIT_01s0011g00540.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 73.78 67.55
TraesCS4A01G144000.1 Wheat plastid 69.16 65.57
TraesCS4B01G152900.1 Wheat plastid 69.16 65.57
TraesCS4D01G154700.1 Wheat plastid 68.88 65.3
EER92117 Sorghum plastid 69.45 64.78
Zm00001d047292_P001 Maize endoplasmic reticulum, plastid 69.16 64.69
HORVU4Hr1G039810.2 Barley plastid 68.88 61.28
GSMUA_Achr4P14350_001 Banana cytosol 68.59 60.41
Zm00001d029534_P001 Maize plastid 69.16 57.97
Os03t0421400-01 Rice plasma membrane 12.1 32.31
Protein Annotations
MapMan:35.2GO:A0A078JJ94UniProt:A0A078JJ94InterPro:Band_7InterPro:Band_7/SPFH_dom_sfEnsemblPlants:CDY65417
ProteinID:CDY65417ProteinID:CDY65417.1InterPro:Erlin1/2GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0006950
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0019538GO:GO:0030433GO:GO:0031625EnsemblPlantsGene:GSBRNA2T00046545001PFAM:PF01145PANTHER:PTHR15351
PANTHER:PTHR15351:SF3SMART:SM00244SUPFAM:SSF117892TMHMM:TMhelixUniParc:UPI0004EF4467:
Description
BnaC02g47990DBnaC02g47990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJ94]
Coordinates
chrLK034776:-:17711..19719
Molecular Weight (calculated)
39721.7 Da
IEP (calculated)
6.520
GRAVY (calculated)
-0.432
Length
347 amino acids
Sequence
(BLAST)
001: MDPQQRRTET GHRPPPGGNM TPILVAFGVF IAIAALVMFP SSSVHQVPEG HVGAYWRGGA LLNIITEPGF HLKLPFITHY EPVQVTLQTD QVRDIPCGTK
101: GGVMVTFEKI EVVNRLRKDY VYDTLLNYGV DYDNAWIYDK IHHEINQFCS SHSLQQVYID IFDQIDERMK EALQADCTRY APGIEIISVR VTKPKIPASV
201: RRNFEQMEEE RTKVLIAIEK QRVAEKEAET KKIMAISEAE KNANVSKILM QQKLTEKDSS RREADIENQM YLDRQKSLAD ADYYRVLKEA EANKLKLTPE
301: FLELKFIDAI AHNTKMFFGD KVPNMVLDQR LLGNFLDHST KDKSSDT
Best Arabidopsis Sequence Match ( AT2G03510.1 )
(BLAST)
001: MDAQQRRTDI PRAPPVGEPG GDISSILIAF GVFAAIAALV MFPSSLVHQV PEGHVGAYWR GGALLNIITE PGFHLKLPFI TNYEPVQVTL QTDQVRDIPC
101: GTKGGVLITF EKIEVVNRLR KDFVYDTLLN YGVNYDNTWI YDKIHHEINQ FCSSHSLQQV YIDIFDQIDE RMKDALQADC TRYAPGIEIL SVRVTKPKIP
201: ESVRRNFEQM EEERTKVLIA IEKQRVAEKE AETKKIMAIS EAEKNANVSK ILMQQKLTEK DSSRREADIE NQMYLDRQKS LADADYYRVL REAEANKLKL
301: TPEFLELKFI DAIARNTKIF FGDKVPNMVL DQRLLGNFLN HSTKDKDGSL EMATDT
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ87]
SUBAcon: [endoplasmic reticulum,plastid,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.