Factsheet for Zm00001d029534_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047292_P001	Maize	endoplasmic reticulum, plastid	86.47	96.5
EER92117	Sorghum	plastid	86.47	96.24
TraesCS4D01G154700.1	Wheat	plastid	72.46	81.97
TraesCS4B01G152900.1	Wheat	plastid	72.46	81.97
TraesCS4A01G144000.1	Wheat	plastid	72.22	81.69
HORVU4Hr1G039810.2	Barley	plastid	72.22	76.67
Solyc05g012340.2.1	Tomato	nucleus	60.63	69.53
KRG89480	Soybean	plastid	60.39	69.25
CDY65417	Canola	cytosol, endoplasmic reticulum, peroxisome	57.97	69.16
GSMUA_Achr4P14350_001	Banana	cytosol	65.46	68.78
KRH50516	Soybean	plastid	60.39	68.68
AT2G03510.1	Thale cress	endoplasmic reticulum, peroxisome, plastid	57.97	67.42
PGSC0003DMT400072932	Potato	golgi, peroxisome, plastid	57.97	67.04
CDY45557	Canola	endoplasmic reticulum, peroxisome, plastid	57.73	66.76
VIT_01s0011g00540.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	60.63	66.23
CDY04155	Canola	endoplasmic reticulum, peroxisome, plastid	57.73	66.2
Bra017383.1-P	Field mustard	cytosol, golgi, peroxisome	57.73	66.2
Os03t0421400-01	Rice	plasma membrane	19.57	62.31

Protein Annotations

EntrezGene:100273090	MapMan:35.2	UniProt:A0A1D6K5S9	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Erlin1/2
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0019538	GO:GO:0030433	GO:GO:0031625	ProteinID:ONL98929.1	PFAM:PF01145
PANTHER:PTHR15351	PANTHER:PTHR15351:SF3	SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI0008453A4D	EnsemblPlantsGene:Zm00001d029534
EnsemblPlants:Zm00001d029534_P001	EnsemblPlants:Zm00001d029534_T001	SEG:seg	:	:	:

Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family

Coordinates

chr1:-:75283292..75289737

Molecular Weight (calculated)

47606.7 Da

IEP (calculated)

8.432

GRAVY (calculated)

-0.354

Length

414 amino acids

Sequence
(BLAST)

001: MSDVTSDSAQ RRRSPPPPSP SPSMPRFQQQ PSGRQPPPPG ADPFAFGIVA FIGICFVLVS LSVPSSVLHQ VPEGHVGVYW RGGALLKTIT PPGFHLKLPL
101: ITQYEPIQVT LQTDQAILIT PYLIFVRDIP CGTKGGVMIS FDKIEVVNRL RKEFVHETLL NYGVHYDKTW IYDKIHHEIN QFCSAHSLQQ VYIDMFDQID
201: ETMKEAIQRD CTRYAPGIEI ISVRVTKPNI PGSIRRNFEL MEEERTKALI AMEKQKVAEK EAETQKKIAL SEAEKNAQVS KILMEQKLME KDSSKRQEQI
301: DNDMYLAREK AVADANYYRH GWQYHILFRS ILLMHASCFL PPTNRIWFGL SRILKEAEAN RLKLTPEYLE LRFIESIANN SKIFFGEKIP NMIMDQRLLK
401: NYLDAAPRKD HYEM

Best Arabidopsis Sequence Match ( AT2G03510.1 )
(BLAST)

001: MDAQQRRTDI PRAPPVGEPG GDISSILIAF GVFAAIAALV MFPSSLVHQV PEGHVGAYWR GGALLNIITE PGFHLKLPFI TNYEPVQVTL QTDQVRDIPC
101: GTKGGVLITF EKIEVVNRLR KDFVYDTLLN YGVNYDNTWI YDKIHHEINQ FCSSHSLQQV YIDIFDQIDE RMKDALQADC TRYAPGIEIL SVRVTKPKIP
201: ESVRRNFEQM EEERTKVLIA IEKQRVAEKE AETKKIMAIS EAEKNANVSK ILMQQKLTEK DSSRREADIE NQMYLDRQKS LADADYYRVL REAEANKLKL
301: TPEFLELKFI DAIARNTKIF FGDKVPNMVL DQRLLGNFLN HSTKDKDGSL EMATDT

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ87]
SUBAcon: [endoplasmic reticulum,plastid,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.