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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 6
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, secretory
BaCelLo:secretory
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
 endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG89480
KRG91473
KRG95352
KRG99174
KRH00872
KRH03376
KRH06560
KRH09074
KRH17200 endoplasmic reticulum
KRH24304
KRH26627
KRH29282
KRH32992
KRH35342
KRH38500
KRH40357
KRH41254
KRH48008
KRH50516
KRH51399
KRH51652
KRH53581
KRH54462
KRH57009
KRH59988
KRH60980
KRH63457
KRH64355
KRH65384
KRH67030
KRH72830 endoplasmic reticulum
KRH76164

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30490.1 KRH51652 AT1G20330.1 23175744
AT2G30490.1 KRH60980 AT1G20330.1 23175744
AT2G30490.1 KRG95352 AT1G51570.1 23175744
AT2G30490.1 KRH32992 AT1G51570.1 23175744
AT2G30490.1 KRH67030 AT1G51570.1 23175744
AT2G30490.1 KRH41254 AT1G64090.2 23175744
AT2G30490.1 KRH59988 AT1G64090.2 23175744
AT2G30490.1 KRG89480 AT2G03510.1 23175744
AT2G30490.1 KRH50516 AT2G03510.1 23175744
AT2G30490.1 KRH24304 AT2G20990.3 23175744
AT2G30490.1 KRH29282 AT2G20990.3 23175744
AT2G30490.1 KRH51399 AT2G20990.3 23175744
AT2G30490.1 KRH17200 AT2G30490.1 23175744
AT2G30490.1 KRH72830 AT2G30490.1 23175744
AT2G30490.1 KRH17200 AT2G30490.1 23175744
AT2G30490.1 KRH72830 AT2G30490.1 23175744
AT2G30490.1 KRH65384 AT2G45140.1 23175744
AT2G30490.1 KRH76164 AT2G45140.1 23175744
AT2G30490.1 KRG99174 AT2G46170.1 23175744
AT2G30490.1 KRH00872 AT2G46170.1 23175744
AT2G30490.1 KRH06560 AT2G46170.1 23175744
AT2G30490.1 KRH40357 AT2G46170.1 23175744
AT2G30490.1 KRH48008 AT2G46170.1 23175744
AT2G30490.1 KRH03376 AT3G48100.1 18642946
AT2G30490.1 KRH54462 AT3G48100.1 18642946
AT2G30490.1 KRH57009 AT3G48100.1 18642946
AT2G30490.1 KRH63457 AT3G48100.1 18642946
AT2G30490.1 KRG91473 AT3G48890.1 23175744
AT2G30490.1 KRH35342 AT3G48890.1 23175744
AT2G30490.1 KRH26627 AT5G22460.1 23175744
AT2G30490.1 KRH41254 AT5G41600.1 23175744
AT2G30490.1 KRH59988 AT5G41600.1 23175744
AT2G30490.1 KRH09074 AT5G52240.1 23175744
AT2G30490.1 KRH38500 AT5G52240.1 23175744
AT2G30490.1 KRH53581 AT5G53560.1 23175744
AT2G30490.1 KRH64355 AT5G53560.1 23175744
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH17200 Soybean endoplasmic reticulum 98.02 98.22
PGSC0003DMT400078288 Potato cytosol 56.32 89.06
PGSC0003DMT400078290 Potato endoplasmic reticulum, golgi 87.94 88.12
EES03803 Sorghum endoplasmic reticulum, golgi 84.39 84.55
VIT_06s0004g08150.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 84.39 84.55
CDY02068 Canola extracellular, golgi, plasma membrane 83.79 83.96
CDY10741 Canola extracellular, golgi, plasma membrane 83.79 83.96
CDX84829 Canola extracellular, golgi, plasma membrane 83.79 83.96
AT2G30490.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 83.79 83.96
Bra018311.1-P Field mustard extracellular, golgi, plasma membrane 83.79 83.96
CDY23995 Canola extracellular, golgi, plasma membrane 83.6 83.76
TraesCS3B01G375100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 83.4 83.4
CDX97826 Canola extracellular, golgi, plasma membrane 83.2 83.37
CDY29670 Canola extracellular, golgi, plasma membrane 83.2 83.37
Bra022803.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 83.2 83.37
Bra021637.1-P Field mustard extracellular, golgi, plasma membrane 83.2 83.37
TraesCS3D01G336900.2 Wheat endoplasmic reticulum 83.0 83.0
TraesCS3A01G342900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 82.81 82.81
HORVU3Hr1G080830.1 Barley endoplasmic reticulum 82.21 82.38
Zm00001d012510_P001 Maize endoplasmic reticulum, golgi, plasma membrane 62.45 82.29
Bra021636.1-P Field mustard extracellular, golgi, plasma membrane 79.64 79.8
CDX84830 Canola endoplasmic reticulum, golgi, plasma membrane 79.25 79.72
CDY23996 Canola endoplasmic reticulum, extracellular, plasma membrane 75.3 79.21
CDY29671 Canola extracellular, golgi, plasma membrane 79.05 79.21
Bra022802.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 78.46 78.93
CDX97827 Canola endoplasmic reticulum, golgi, plasma membrane 78.26 78.42
TraesCS2D01G300200.1 Wheat endoplasmic reticulum 74.7 74.7
TraesCS2B01G317700.1 Wheat endoplasmic reticulum, golgi 46.05 72.14
KRH35971 Soybean plastid 58.89 64.64
KRG90791 Soybean plasma membrane, vacuole 62.06 58.26
Os01t0820000-00 Rice plasma membrane 28.06 42.64
Protein Annotations
Gene3D:1.10.630.10EntrezGene:100499623MapMan:9.2.1.2UniProt:C0LUU6InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEMBL:FJ770468EnsemblPlantsGene:GLYMA_02G236500GO:GO:0003674GO:GO:0003824
GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009808GO:GO:0009987GO:GO:0016020GO:GO:0016491GO:GO:0016705
GO:GO:0016710GO:GO:0019748GO:GO:0020037GO:GO:0044550GO:GO:0046872GO:GO:0055114
InterPro:IPR036396EMBL:JN858958EnsemblPlants:KRH72830ProteinID:KRH72830ProteinID:KRH72830.1PFAM:PF00067
PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF56UniProt:Q42797
SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0000136ADBEMBL:X92437SEG:seg:
Description
CYP73A11hypothetical protein
Coordinates
chr2:-:42416141..42420467
Molecular Weight (calculated)
58014.6 Da
IEP (calculated)
9.431
GRAVY (calculated)
-0.245
Length
506 amino acids
Sequence
(BLAST)
001: MDLLLLEKTL IGLFLAAVVA IAVSTLRGRK FKLPPGPLPV PIFGNWLQVG DDLNHRNLTD LAKKFGDIFL LRMGQRNLVV VSSPELAKEV LHTQGVEFGS
101: RTRNVVFDIF TGKGQDMVFT VYGEHWRKMR RIMTVPFFTN KVVQQYRHGW ESEAAAVVED VKKNPDAAVS GTVIRRRLQL MMYNNMYRIM FDRRFESEED
201: PIFQRLRALN GERSRLAQSF EYNYGDFIPI LRPFLKGYLK ICKEVKETRL KLFKDYFVDE RKKLGSTKST NNNNELKCAI DHILDAQRKG EINEDNVLYI
301: VENINVAAIE TTLWSIEWGI AELVNHPEIQ QKLRDEIDRV LGAGHQVTEP DIQKLPYLQA VVKETLRLRM AIPLLVPHMN LHDAKLGGYD IPAESKILVN
401: AWWLANNPAH WKKPEEFRPE RFFEEESLVE ANGNDFRYLP FGVGRRSCPG IILALPILGI TLGRLVQNFE LLPPPGQSQI DTSEKGGQFS LHILKHSTIV
501: AKPRSF
Best Arabidopsis Sequence Match ( AT2G30490.1 )
(BLAST)
001: MDLLLLEKSL IAVFVAVILA TVISKLRGKK LKLPPGPIPI PIFGNWLQVG DDLNHRNLVD YAKKFGDLFL LRMGQRNLVV VSSPDLTKEV LLTQGVEFGS
101: RTRNVVFDIF TGKGQDMVFT VYGEHWRKMR RIMTVPFFTN KVVQQNREGW EFEAASVVED VKKNPDSATK GIVLRKRLQL MMYNNMFRIM FDRRFESEDD
201: PLFLRLKALN GERSRLAQSF EYNYGDFIPI LRPFLRGYLK ICQDVKDRRI ALFKKYFVDE RKQIASSKPT GSEGLKCAID HILEAEQKGE INEDNVLYIV
301: ENINVAAIET TLWSIEWGIA ELVNHPEIQS KLRNELDTVL GPGVQVTEPD LHKLPYLQAV VKETLRLRMA IPLLVPHMNL HDAKLAGYDI PAESKILVNA
401: WWLANNPNSW KKPEEFRPER FFEEESHVEA NGNDFRYVPF GVGRRSCPGI ILALPILGIT IGRMVQNFEL LPPPGQSKVD TSEKGGQFSL HILNHSIIVM
501: KPRNC
Arabidopsis Description
CYP73A5Cinnamate-4-hydroxylase [Source:UniProtKB/TrEMBL;Acc:B1GV49]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.