Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003551.1-P | Field mustard | cytosol | 85.0 | 88.31 |
| CDY54309 | Canola | cytosol | 85.0 | 88.31 |
| CDY57687 | Canola | cytosol | 85.0 | 88.31 |
| Solyc03g116720.1.1 | Tomato | cytosol | 59.38 | 82.61 |
| VIT_09s0002g06960.t01 | Wine grape | cytosol | 75.0 | 76.92 |
| KRH47442 | Soybean | extracellular | 71.88 | 73.72 |
| KRH44466 | Soybean | extracellular | 71.25 | 73.08 |
| PGSC0003DMT400001706 | Potato | cytosol | 70.62 | 72.9 |
| KRH09720 | Soybean | extracellular | 66.88 | 69.48 |
| AT3G21510.1 | Thale cress | cytosol, nucleus, plastid | 40.62 | 42.21 |
| AT1G03430.2 | Thale cress | cytosol | 36.88 | 37.58 |
| AT3G29350.1 | Thale cress | cytosol | 33.75 | 34.62 |
| AT3G16360.2 | Thale cress | nucleus | 31.25 | 34.48 |
| AT5G39340.2 | Thale cress | extracellular, plasma membrane | 36.25 | 28.43 |
| AT4G04402.1 | Thale cress | extracellular | 22.5 | 21.56 |
Protein Annotations
| Gene3D:1.20.120.160 | MapMan:11.4.2.2 | EntrezGene:844350 | UniProt:A0A1P8AR55 | Symbol:AHP6 | ProteinID:ANM59139.1 |
| ArrayExpress:AT1G80100 | EnsemblPlantsGene:AT1G80100 | RefSeq:AT1G80100 | TAIR:AT1G80100 | RefSeq:AT1G80100-TAIR-G | EnsemblPlants:AT1G80100.3 |
| GO:GO:0000160 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:HPT_dom_sf | InterPro:IPR008207 |
| InterPro:IPR036641 | RefSeq:NP_001321526.1 | PFAM:PF01627 | PFscan:PS50894 | PANTHER:PTHR28242 | PANTHER:PTHR28242:SF1 |
| SUPFAM:SSF47226 | InterPro:Sig_transdc_His_kin_Hpt_dom | UniParc:UPI000848DA57 | SEG:seg | : | : |
Description
AHP6histidine phosphotransfer protein 6 [Source:TAIR;Acc:AT1G80100]
Coordinates
chr1:+:30133718..30134920
Molecular Weight (calculated)
18438.3 Da
IEP (calculated)
6.347
GRAVY (calculated)
-0.090
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGLGVDRLQ ADINRLLASL FHQGVLDEQF LQLQQLQDET SPNFVYDVIN IYFDESEKLL RNLRLLLMDR EFSDYKKIGL HLNQLVGSSS SIGARRVRNV
101: CVAFRSASEL SNRPGCLRGL EVVEHEYHYL KNMMHELFQV LTCFVNILLT FTQTEGKNVS
101: CVAFRSASEL SNRPGCLRGL EVVEHEYHYL KNMMHELFQV LTCFVNILLT FTQTEGKNVS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.