Factsheet for VIT_03s0063g01820.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 3
cytosol 1
endoplasmic reticulum 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0063g01840.t01	Wine grape	cytosol	37.99	82.59
VIT_03s0063g01860.t01	Wine grape	plastid	74.13	74.74
VIT_03s0063g01850.t01	Wine grape	plastid	73.31	73.91
VIT_03s0063g01830.t01	Wine grape	plastid	83.98	71.5
Solyc01g109160.2.1	Tomato	cytosol	63.04	62.91
Solyc01g109150.2.1	Tomato	cytosol	62.22	61.34
KRH29541	Soybean	endoplasmic reticulum	60.16	61.3
Solyc10g007960.1.1	Tomato	cytosol	59.96	59.47
PGSC0003DMT400027377	Potato	cytosol	59.75	59.27
GSMUA_Achr8P04830_001	Banana	cytosol	50.72	58.39
Os03t0225900-01	Rice	mitochondrion, plastid	53.8	54.81
KRH49555	Soybean	endoplasmic reticulum	58.73	54.79
Zm00001d028282_P001	Maize	plastid	54.0	54.56
TraesCS4A01G061800.1	Wheat	plastid	53.39	54.17
HORVU4Hr1G066230.1	Barley	plastid	53.39	54.17
VIT_18s0001g11630.t01	Wine grape	plastid	57.7	54.04
TraesCS4B01G237500.1	Wheat	plastid	53.18	53.96
TraesCS4D01G238700.1	Wheat	plastid	53.18	53.96
OQU92970	Sorghum	cytosol	53.39	53.83
TraesCS4A01G061900.1	Wheat	cytosol, golgi, unclear	53.18	53.73
TraesCS4B01G237600.1	Wheat	cytosol, plastid	53.18	53.73
TraesCS4D01G238800.1	Wheat	cytosol, golgi	52.98	53.53
HORVU4Hr1G066270.1	Barley	plasma membrane	53.18	53.18
PGSC0003DMT400064771	Potato	cytosol	51.95	52.93
Zm00001d048021_P001	Maize	plasma membrane	52.36	52.9
Solyc01g109140.2.1	Tomato	nucleus	50.72	51.67
PGSC0003DMT400064773	Potato	cytosol	48.05	51.43
VIT_12s0059g01060.t01	Wine grape	plastid	37.78	37.78
GSMUA_Achr5P08810_001	Banana	cytosol	51.95	29.11

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100253713	wikigene:100253713	MapMan:11.7.1.3	ProteinID:CCB56940	ProteinID:CCB56940.1
InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	UniProt:F6HQI3	EMBL:FN596006	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0016125	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	EntrezGene:LOC100253713	wikigene:LOC100253713	PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286
PANTHER:PTHR24286:SF76	SUPFAM:SSF48264	UniParc:UPI00015C85B7	ArrayExpress:VIT_03s0063g01820	EnsemblPlantsGene:VIT_03s0063g01820	EnsemblPlants:VIT_03s0063g01820.t01
RefSeq:XP_002281226	RefSeq:XP_002281226.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:-:5156561..5158024

Molecular Weight (calculated)

54684.6 Da

IEP (calculated)

6.612

GRAVY (calculated)

-0.128

Length

487 amino acids

Sequence
(BLAST)

001: MSSSSDKNDL NSSSSLSKLP LRKIPGDYGL PFFGAIKDRL DYFYKQGREE FFNARMHKYQ STVFRANMPP GPFMASNPNV IVLLDSISFP ILFDTSKVEK
101: RNVLDGTYMP STAFTGGYRV CAYLDPSETN HALLKRLFMS ALAARHHNFI PLFRSSLSEL FTSLEDDISS KGEADFNDIS DNMSFNFVFR LFCDKYPSET
201: ALGSQGPSIV TKWLFFQLAP LITLGLSLLP NFVEDLLLHT FPLPSIFVKS DYKKLYRAFY ASASSILDEA ESMGIKRDEA CHNLVFLAGF NAYGGMKALF
301: PSLIKWVGSA GEKLHRELAD EIRTVVKAEG GVSFAALEKM SLTKSVVYEA LRIDPPVPFQ YGKAKEDMVI HSHDAAFEIK KGEMIFGYQP FATKDPKVFD
401: NPEEFMGNRF MGEGERLLKY VYWSNGRESG NPTVENKQCA GKDLVLLLSR VMLVEFFLRY DTFDIESGTL LLGSSVTFKS ITKATDS

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.