Factsheet for GSMUA_Achr3P28250_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
plasma membrane 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P22740_001
GSMUA_Achr4P17470_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G15300.1	GSMUA_Achr1P22740_001	AT5G35750.1	18642946
AT2G15300.1	GSMUA_Achr4P17470_001	AT5G35750.1	18642946
AT2G15300.1	GSMUA_AchrUn_...	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008868_P001	Maize	endoplasmic reticulum, extracellular, plastid	9.47	78.57
Zm00001d045902_P001	Maize	cytosol	13.94	72.32
GSMUA_Achr9P22590_001	Banana	plasma membrane	64.72	56.97
GSMUA_Achr4P12930_001	Banana	plasma membrane, vacuole	55.94	56.42
GSMUA_Achr8P25210_001	Banana	plasma membrane	65.75	55.85
GSMUA_Achr4P09420_001	Banana	plasma membrane	60.41	51.39
EER90087	Sorghum	plasma membrane	61.96	41.52
VIT_07s0129g01070.t01	Wine grape	plasma membrane	55.42	41.23
VIT_03s0180g00150.t01	Wine grape	plasma membrane	53.36	41.01
Os09t0110100-01	Rice	plasma membrane	55.94	40.93
Os06t0638500-00	Rice	plasma membrane	61.62	40.87
TraesCS5D01G165400.1	Wheat	plasma membrane	56.45	40.39
Zm00001d046626_P001	Maize	plasma membrane	58.35	40.21
TraesCS5B01G158000.1	Wheat	plasma membrane	56.11	40.15
TraesCS7A01G523900.1	Wheat	plasma membrane	59.9	39.95
TraesCS5A01G160500.1	Wheat	plasma membrane	55.94	39.93
TraesCS7D01G512900.1	Wheat	plasma membrane	59.55	39.77
PGSC0003DMT400066225	Potato	plasma membrane	52.5	39.56
KRH04528	Soybean	plasma membrane	51.64	39.42
HORVU7Hr1G116470.2	Barley	plasma membrane	59.21	39.31
TraesCS7B01G441200.1	Wheat	plasma membrane	59.38	39.29
KRH57974	Soybean	plasma membrane	51.98	39.22
Solyc01g107650.2.1	Tomato	plasma membrane	51.98	39.17
CDY69287	Canola	mitochondrion	23.24	38.79
CDX89556	Canola	plasma membrane	50.77	38.56
CDY38934	Canola	plasma membrane	50.77	38.51
Bra032175.1-P	Field mustard	plasma membrane	50.43	38.25
CDX69286	Canola	plasma membrane	49.57	38.2
PGSC0003DMT400064235	Potato	plasma membrane	50.43	38.15
Solyc02g092940.2.1	Tomato	plasma membrane	50.43	38.15
KRG91028	Soybean	plasma membrane	50.77	38.06
EER98554	Sorghum	plasma membrane	55.25	38.03
Zm00001d019701_P001	Maize	plasma membrane	54.04	38.01
Bra011747.1-P	Field mustard	plasma membrane	49.74	37.98
CDX75634	Canola	plasma membrane	49.57	37.94
KRH35733	Soybean	plasma membrane	50.77	37.82
AT5G67280.1	Thale cress	plasma membrane	48.71	37.68
AT2G23300.1	Thale cress	plasma membrane	50.09	37.65
AT4G37250.1	Thale cress	plasma membrane	49.74	37.63
Bra012148.1-P	Field mustard	plasma membrane	47.68	37.48
Zm00001d005298_P001	Maize	mitochondrion, plasma membrane	53.36	37.39
KRH33257	Soybean	cytosol, golgi, plasma membrane	18.93	36.07
AT4G34220.1	Thale cress	plasma membrane	46.64	35.8
CDX69035	Canola	plasma membrane	45.96	35.74
CDX75411	Canola	plasma membrane	45.44	35.39
Bra011508.1-P	Field mustard	plasma membrane	45.27	35.25
Bra039836.1-P	Field mustard	plasma membrane	43.03	34.87
CDY52422	Canola	plasma membrane	42.86	34.58
CDY54466	Canola	plasma membrane	42.34	34.26
AT2G15300.1	Thale cress	plasma membrane	43.37	33.87
GSMUA_Achr3P29400_001	Banana	plasma membrane	34.42	33.73
GSMUA_Achr8P18330_001	Banana	plasma membrane	30.98	33.58
GSMUA_Achr3P21080_001	Banana	plasma membrane	31.15	33.39
GSMUA_Achr9P21500_001	Banana	plasma membrane	34.94	32.9
GSMUA_Achr4P06720_001	Banana	plasma membrane	32.7	31.51
PGSC0003DMT400066550	Potato	endoplasmic reticulum, plasma membrane	16.18	31.02
GSMUA_Achr1P13440_001	Banana	plasma membrane	29.78	30.35
GSMUA_Achr3P11100_001	Banana	plasma membrane	28.57	28.57
GSMUA_Achr6P03450_001	Banana	plastid	28.57	26.99
CDY01423	Canola	plasma membrane	48.36	26.43
CDY12827	Canola	plasma membrane	47.85	26.15
GSMUA_Achr6P28540_001	Banana	vacuole	25.82	23.11

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr3G28250_001	EnsemblPlants:GSMUA_Achr3P28250_001
EnsemblPlants:GSMUA_Achr3T28250_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0SIJ1	PFAM:PF00069	PFAM:PF00560	PFAM:PF13855
PRINTS:PR00019	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF42	InterPro:Prot_kinase_dom	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF56112	TMHMM:TMhelix	UniParc:UPI00029583E2	SEG:seg	:

Description

Putative Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:GMGC_GENE;Acc:GSMUA_Achr3G28250_001]

Coordinates

chr3:-:27592167..27595505

Molecular Weight (calculated)

61668.5 Da

IEP (calculated)

8.740

GRAVY (calculated)

-0.006

Length

581 amino acids

Sequence
(BLAST)

001: MKCSSCYRWL RMASHLKGCS FCFRLPNHAS TTSRVIGLVL PDSQLVGSIP PELGLVEHLR HLDLSGNALN GTLPPSIFNA SELQVLSLAD NAISGELLEL
101: DGRMNGLQVL NLSGNALVGA VPAGLALLPN LTYLDLSSNL INGSLPPDLG GKMVRYMNLS HNRIAGAIPR ELTSIIPANA TSPPAFAAMP KNAAVGTSPS
201: DSGHGQGGLR PAAIIAIAVG DVIGIGILFA VFYYVFQPPT SSKSKGFGGL SCSQQKGGKD EGGGRTPTQQ KQQEATLVTV DGDTELELET LLKASAYILG
301: ATGSSIVYRA VLADGTALAV RRIGESSVID KLKDFDAQVR GIARFRHPNL LRLRGFYWGA DEKLLIHDYA PNGSIANISF TKKLGSSPFH LSWESRLRIA
401: RGVARGLAYL HEKKAVHGNM KPSNILLDAD MEPKISDFGL DRLTSGGGGG YRLGTSPCGS SSALAIASAA PYQAPESLKN LKPSAKWDVY AFGMVLLELL
501: AGRVLSEVEL GQWNAGFAAE ERGRMLRMTD PALRGEVEGK EEAMLSCFKL GFACCAVAPQ RRPSMKDAVQ VLEKIPSSSS S

Best Arabidopsis Sequence Match ( AT5G67280.1 )
(BLAST)

001: MMTTVAADLH RYLFLITVFL FFLCDKTSLA LTTDGVLLLS FRYSIVDDPL YVFRSWRFDD ETPCSWRGVT CDASSRHVTV LSLPSSNLTG TLPSNLGSLN
101: SLQRLDLSNN SINGSFPVSL LNATELRFLD LSDNHISGAL PASFGALSNL QVLNLSDNSF VGELPNTLGW NRNLTEISLQ KNYLSGGIPG GFKSTEYLDL
201: SSNLIKGSLP SHFRGNRLRY FNASYNRISG EIPSGFADEI PEDATVDLSF NQLTGQIPGF RVLDNQESNS FSGNPGLCGS DHAKHPCRDG EATSPPPSPT
301: PNSPPALAAI PNTIGLTNHP ISSKTGPKSK WDHKPVLIIG IVVGDLAGLA ILGIVFFYIY QSRKRKTVTA TSKWSTSSTD SKVSKWYCLR KSVYVDGDCE
401: EEEEESETSE SESDEENPVG PNRRSGLDDQ EKKGTLVNLD SEKELEIETL LKASAYILGA TGSSIMYKAV LQDGTAVAVR RIAECGLDRF RDFEAQVRAV
501: AKLIHPNLVR IRGFYWGSDE KLVIYDFVPN GSLANARYRK VGSSPCHLPW DARLKIAKGI ARGLTYVHDK KYVHGNLKPS NILLGLDMEP KVADFGLEKL
601: LIGDMSYRTG GSAPIFGSKR STTSLEFGPS PSPSPSSVGL PYNAPESLRS IKPNSKWDVY SFGVILLELL TGKIVVVDEL GQVNGLVIDD GERAIRMADS
701: AIRAELEGKE EAVLACLKMG LACASPIPQR RPNIKEALQV LERFPVHSSQ Q

Arabidopsis Description

RLKAt5g67280/K3G17_4 [Source:UniProtKB/TrEMBL;Acc:Q9FGQ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.