Factsheet for Zm00001d005298_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 4
plasma membrane 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d014297_P006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G15300.1	Zm00001d014297_P006	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019701_P001	Maize	plasma membrane	82.39	82.69
Os09t0110100-01	Rice	plasma membrane	70.08	73.17
TraesCS5D01G165400.1	Wheat	plasma membrane	67.91	69.33
TraesCS5A01G160500.1	Wheat	plasma membrane	67.79	69.04
TraesCS5B01G158000.1	Wheat	plasma membrane	67.07	68.47
Zm00001d008868_P001	Maize	endoplasmic reticulum, extracellular, plastid	5.67	67.14
Zm00001d045902_P001	Maize	cytosol	7.84	58.04
GSMUA_Achr4P12930_001	Banana	plasma membrane, vacuole	37.64	54.17
GSMUA_Achr3P28250_001	Banana	mitochondrion	37.39	53.36
GSMUA_Achr8P25210_001	Banana	plasma membrane	42.46	51.46
GSMUA_Achr9P22590_001	Banana	plasma membrane	40.65	51.06
PGSC0003DMT400066550	Potato	endoplasmic reticulum, plasma membrane	17.49	47.85
VIT_03s0180g00150.t01	Wine grape	plasma membrane	41.86	45.9
GSMUA_Achr4P09420_001	Banana	plasma membrane	37.76	45.83
Zm00001d036766_P001	Maize	cytosol	11.7	45.54
Solyc02g092940.2.1	Tomato	plasma membrane	41.5	44.79
PGSC0003DMT400064235	Potato	plasma membrane	41.5	44.79
VIT_07s0129g01070.t01	Wine grape	plasma membrane	41.98	44.56
KRH57974	Soybean	plasma membrane	41.01	44.16
KRH04528	Soybean	plasma membrane	40.29	43.89
Zm00001d046626_P001	Maize	plasma membrane	44.27	43.53
Solyc01g107650.2.1	Tomato	plasma membrane	40.17	43.19
AT5G67280.1	Thale cress	plasma membrane	38.96	43.01
CDY38934	Canola	plasma membrane	39.45	42.69
Bra032175.1-P	Field mustard	plasma membrane	39.45	42.69
PGSC0003DMT400066225	Potato	plasma membrane	39.69	42.67
Bra012148.1-P	Field mustard	plasma membrane	38.0	42.63
KRH33257	Soybean	cytosol, golgi, plasma membrane	15.68	42.62
CDX89556	Canola	plasma membrane	39.32	42.61
CDX69286	Canola	plasma membrane	38.6	42.44
KRG91028	Soybean	plasma membrane	39.57	42.32
CDX75634	Canola	plasma membrane	38.48	42.03
Bra039836.1-P	Field mustard	plasma membrane	36.31	41.98
AT2G15300.1	Thale cress	plasma membrane	37.64	41.94
KRH35733	Soybean	plasma membrane	39.45	41.92
Bra011747.1-P	Field mustard	plasma membrane	38.48	41.92
CDY54466	Canola	plasma membrane	35.95	41.5
CDY52422	Canola	plasma membrane	35.83	41.25
AT2G23300.1	Thale cress	plasma membrane	38.36	41.14
AT4G37250.1	Thale cress	plasma membrane	37.88	40.89
CDX75411	Canola	plasma membrane	36.43	40.48
CDX69035	Canola	plasma membrane	36.43	40.43
Bra011508.1-P	Field mustard	plasma membrane	36.19	40.21
AT4G34220.1	Thale cress	plasma membrane	36.67	40.16
Zm00001d024047_P001	Maize	plasma membrane	31.85	34.97
Zm00001d004635_P002	Maize	plasma membrane	31.24	34.81
Zm00001d031437_P001	Maize	plasma membrane	27.62	34.59
CDY69287	Canola	mitochondrion	14.48	34.48
CDY12827	Canola	plasma membrane	38.6	30.1
CDY01423	Canola	plasma membrane	38.48	30.01

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	UniProt:A0A1D6ELL9	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	ProteinID:ONM20785.1	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF50	InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52058
SUPFAM:SSF56112	TMHMM:TMhelix	UniParc:UPI0002219FF2	EnsemblPlantsGene:Zm00001d005298	EnsemblPlants:Zm00001d005298_P001	EnsemblPlants:Zm00001d005298_T001
SEG:seg	:	:	:	:	:

Description

receptor-like kinase

Coordinates

chr2:+:168386230..168389148

Molecular Weight (calculated)

86052.1 Da

IEP (calculated)

8.795

GRAVY (calculated)

0.012

Length

829 amino acids

Sequence
(BLAST)

001: MPRLHLTSTA MAGTNGAPRL LRLPTTATTS TSSTPLLRLL ALLQLLCLAS ALNQDGILLL SFKQSLASDP LGSLSGWGYA DVTPCAWNGV VCSPDSRVVS
101: VVLPNAQLVG PVARELALIE NLRHLDLSGN ALTGTIPPDL LRAPELRVLS LAGNGITGGL PEQVGQLRSL RALNLAGNAL SGAVPQNLTL LPNLTAVSLA
201: NNFFSGTLPR GGFPALQVLD VSANLLNGTL PSDFGGAALR YVNLSSNGIA GAIPSDMASR LPANVTIDLS YNNLTGAIPS VPPFSAQRPT AFEGNAELCG
301: RPLDSLCGFT SSSSAAAEPQ PPNATAKSPP AIAAIPRDPT EALPGDGSSS AAGASASGEQ RGRMRLATIV AIAAGDVAGI AVLFVVVMYV YQVRRKRQRQ
401: EVAAKQRTGV VFKKPDPDES PDAVSRSLSC CLRKKAGDDS DYSEEVTDTS PASFADHKNG KAAGAEAASN KKMGGDGAVL VTVDGGAELE LETLLKASAY
501: ILGAAGSSIV YKAVLADGAA LAVRRIGSEC SGVRRFGELD AHMRAVAKLR HDNILRLRGF YWGPDEMLII HGFAINGNLA NHSVKRKQGS SPINLGWSAR
601: LRIARGVARG LAYLHDKKWV HGNVKPSNIL LDADMEPLLA DLGVDRLVRS ADGGGLTKPS SAALAGRFGG SKRSAKSLPD LSPPPSHVGG TAAQPASPAV
701: DTAAHYRAPE AVRSPRASGK WDVYSFGVLL LELVAGRALT SLELCQCAAA EGKAQAQALG VVDPTLRREV EGREEEEEAV ASCLRLGAAC CAMVPSKRPS
801: IRDALQAVER MIPAAVASSS TSTAASHRH

Best Arabidopsis Sequence Match ( AT4G37250.1 )
(BLAST)

001: MRMELISVIF FFFCSVLSSS ALNSDGLVLM KFKSSVLVDP LSLLQTWNYK HESPCSWRGI SCNNDSKVLT LSLPNSQLLG SIPSDLGSLL TLQSLDLSNN
101: SFNGPLPVSF FNARELRFLD LSSNMISGEI PSAIGDLHNL LTLNLSDNAL AGKLPTNLAS LRNLTVVSLE NNYFSGEIPG GWRVVEFLDL SSNLINGSLP
201: PDFGGYSLQY LNVSFNQISG EIPPEIGVNF PRNVTVDLSF NNLTGPIPDS PVFLNQESNF FSGNPGLCGE PTRNPCLIPS SPSIVSEADV PTSTPAIAAI
301: PNTIGSNPVT DPNSQQTDPN PRTGLRPGVI IGIVVGDIAG IGILAVIFLY IYRCKKNKIV DNNNNDKQRT ETDTITLSTF SSSSSSPEES RRFRKWSCLR
401: KDPETTPSEE EDEDDEDEES GYNANQRSGD NKLVTVDGEK EMEIETLLKA SAYILGATGS SIMYKAVLED GRVFAVRRLG ENGLSQRRFK DFEPHIRAIG
501: KLVHPNLVRL CGFYWGTDEK LVIYDFVPNG SLVNPRYRKG GGSSSPYHLP WETRLKIAKG IARGLAYLHE KKHVHGNLKP SNILLGHDME PKIGDFGLER
601: LLTGETSYIR AGGSSRIFSS KRYTTSSREF SSIGPTPSPS PSSVGAMSPY CAPESFRSLK PSPKWDVYGF GVILLELLTG KIVSVEEIVL GNGLTVEDGH
701: RAVRMADVAI RGELDGKQEF LLDCFKLGYS CASPVPQKRP TMKESLAVLE RFHPNSSVIK SSSFHYGH

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:UniProtKB/Swiss-Prot;Acc:C0LGS3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.