Factsheet for PGSC0003DMT400066225

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 10
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g107650.2.1	Tomato	plasma membrane	96.89	96.89
PGSC0003DMT400066550	Potato	endoplasmic reticulum, plasma membrane	36.06	91.75
Zm00001d008868_P001	Maize	endoplasmic reticulum, extracellular, plastid	5.97	65.71
KRH33257	Soybean	cytosol, golgi, plasma membrane	23.99	60.66
VIT_03s0180g00150.t01	Wine grape	plasma membrane	57.85	58.99
Zm00001d045902_P001	Maize	cytosol	8.56	58.93
GSMUA_Achr4P12930_001	Banana	plasma membrane, vacuole	42.54	56.94
KRG91028	Soybean	plasma membrane	55.64	55.35
KRH35733	Soybean	plasma membrane	55.38	54.74
GSMUA_Achr8P25210_001	Banana	plasma membrane	47.08	53.07
PGSC0003DMT400064235	Potato	plasma membrane	52.53	52.73
GSMUA_Achr3P28250_001	Banana	mitochondrion	39.56	52.5
GSMUA_Achr9P22590_001	Banana	plasma membrane	44.23	51.67
GSMUA_Achr4P09420_001	Banana	plasma membrane	41.63	47.0
Os09t0110100-01	Rice	plasma membrane	44.62	43.32
TraesCS5A01G160500.1	Wheat	plasma membrane	45.27	42.87
TraesCS5D01G165400.1	Wheat	plasma membrane	45.14	42.86
TraesCS5B01G158000.1	Wheat	plasma membrane	44.75	42.49
EER90087	Sorghum	plasma membrane	46.95	41.75
Os06t0638500-00	Rice	plasma membrane	46.82	41.21
Zm00001d046626_P001	Maize	plasma membrane	44.62	40.81
EER98554	Sorghum	plasma membrane	43.97	40.17
Zm00001d019701_P001	Maize	plasma membrane	42.93	40.07
Zm00001d005298_P001	Maize	mitochondrion, plasma membrane	42.67	39.69
HORVU7Hr1G116470.2	Barley	plasma membrane	45.01	39.66
TraesCS7D01G512900.1	Wheat	plasma membrane	44.75	39.66
TraesCS7A01G523900.1	Wheat	plasma membrane	44.75	39.61
TraesCS7B01G441200.1	Wheat	plasma membrane	44.62	39.18
PGSC0003DMT400078542	Potato	plasma membrane	32.81	35.43
PGSC0003DMT400038616	Potato	mitochondrion	30.74	34.75
PGSC0003DMT400033662	Potato	plasma membrane	27.76	34.13

Protein Annotations

MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	UniProt:M1CF83	PFAM:PF00069	PFAM:PF08263	EnsemblPlantsGene:PGSC0003DMG400025771
PGSC:PGSC0003DMG400025771	EnsemblPlants:PGSC0003DMT400066225	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF35	InterPro:Prot_kinase_dom
SUPFAM:SSF52058	SUPFAM:SSF56112	TMHMM:TMhelix	UniParc:UPI000296E262	SEG:seg	:

Description

Interleukin-1 receptor-associated kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400025771]

Coordinates

chr1:+:84058040..84061476

Molecular Weight (calculated)

84583.8 Da

IEP (calculated)

5.907

GRAVY (calculated)

-0.186

Length

771 amino acids

Sequence
(BLAST)

001: MTISEHYYSF WSFGIFFFLL LCPSFGLNID GTLLLSFKYS VLDDPLSVLD NWDYNDATPC LWNGVTCAPD MFRVISLLLP NSKLIGSIPE ELGFIQHLHT
101: IDLSNNFLNG TLPLSLLNAS ELQVLSLSNN AISGELTESI GVLKSLKVLN LSVNAFVGNI PQKLSSLQNL KVVSLSKNLF SGAIPSGFQF VEVLDLSSNL
201: LNGTLPDDFG GDSLKYLNFS SNKLSGLVSP QFAKKIPTNA TIDLSFNSFT GEIPESLALS NQKTEFFAGN TDLCGKPLKK LCTIPSTLSS PPNITTNPPA
301: IAAIPKEINS TPFQDSDGTT QTAAQNQQQH GLKPGTIMGI IVGDLAGVGV LAIVFLYVYK LKKKNKASEA TIESSIDKDQ KYNKTPEPSI LVVKEKDTIF
401: PSWPCLTINQ ESSDTDDSKN QESEDQIEYE TEQKNEKNKK TERSFVMVDG ETELELETLL KASAYILGSS GASIVYKAVL EDGTAFAVRR IGESGVDKLK
501: DFEQQIKGIN KLRHPNLVRV RGFYWGDDEK LVIYDYVTNG SLANIGYKKV GSSPYHLSYE VRLKIAKGIA RGLTYIHEKR QVHGNIKPSN ILLTPDMEPI
601: ISDIGLHGLM HGKNTSKPDN SGRHFGSKRS TSSSRDGLND QPVHGSPYIA PAGFVVGCTS PYHAPESLES LKPSPKWDVY SFGIVLLELL TGKVFSDREL
701: SQWTTGSVSD DVDLVLRMAD VAIRADVESR EETTVSLFKL GFSCASLNPQ KRPTMKDALH VLDKVPGYSH Y

Best Arabidopsis Sequence Match ( AT4G37250.1 )
(BLAST)

001: MRMELISVIF FFFCSVLSSS ALNSDGLVLM KFKSSVLVDP LSLLQTWNYK HESPCSWRGI SCNNDSKVLT LSLPNSQLLG SIPSDLGSLL TLQSLDLSNN
101: SFNGPLPVSF FNARELRFLD LSSNMISGEI PSAIGDLHNL LTLNLSDNAL AGKLPTNLAS LRNLTVVSLE NNYFSGEIPG GWRVVEFLDL SSNLINGSLP
201: PDFGGYSLQY LNVSFNQISG EIPPEIGVNF PRNVTVDLSF NNLTGPIPDS PVFLNQESNF FSGNPGLCGE PTRNPCLIPS SPSIVSEADV PTSTPAIAAI
301: PNTIGSNPVT DPNSQQTDPN PRTGLRPGVI IGIVVGDIAG IGILAVIFLY IYRCKKNKIV DNNNNDKQRT ETDTITLSTF SSSSSSPEES RRFRKWSCLR
401: KDPETTPSEE EDEDDEDEES GYNANQRSGD NKLVTVDGEK EMEIETLLKA SAYILGATGS SIMYKAVLED GRVFAVRRLG ENGLSQRRFK DFEPHIRAIG
501: KLVHPNLVRL CGFYWGTDEK LVIYDFVPNG SLVNPRYRKG GGSSSPYHLP WETRLKIAKG IARGLAYLHE KKHVHGNLKP SNILLGHDME PKIGDFGLER
601: LLTGETSYIR AGGSSRIFSS KRYTTSSREF SSIGPTPSPS PSSVGAMSPY CAPESFRSLK PSPKWDVYGF GVILLELLTG KIVSVEEIVL GNGLTVEDGH
701: RAVRMADVAI RGELDGKQEF LLDCFKLGYS CASPVPQKRP TMKESLAVLE RFHPNSSVIK SSSFHYGH

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:UniProtKB/Swiss-Prot;Acc:C0LGS3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.