Factsheet for Zm00001d046626_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d014297_P006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G15300.1	Zm00001d014297_P006	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008868_P001	Maize	endoplasmic reticulum, extracellular, plastid	7.47	90.0
EER90087	Sorghum	plasma membrane	90.27	87.77
Zm00001d045902_P001	Maize	cytosol	10.91	82.14
Os06t0638500-00	Rice	plasma membrane	77.22	74.32
Zm00001d036766_P001	Maize	cytosol	17.91	70.89
TraesCS7B01G441200.1	Wheat	plasma membrane	73.31	70.39
TraesCS7A01G523900.1	Wheat	plasma membrane	72.24	69.92
TraesCS7D01G512900.1	Wheat	plasma membrane	71.65	69.43
HORVU7Hr1G116470.2	Barley	plasma membrane	71.77	69.14
GSMUA_Achr8P25210_001	Banana	plasma membrane	47.45	58.48
GSMUA_Achr3P28250_001	Banana	mitochondrion	40.21	58.35
GSMUA_Achr4P12930_001	Banana	plasma membrane, vacuole	39.74	58.16
GSMUA_Achr9P22590_001	Banana	plasma membrane	44.48	56.82
GSMUA_Achr4P09420_001	Banana	plasma membrane	43.3	53.44
PGSC0003DMT400066550	Potato	endoplasmic reticulum, plasma membrane	16.96	47.19
KRH04528	Soybean	plasma membrane	41.99	46.52
VIT_07s0129g01070.t01	Wine grape	plasma membrane	42.59	45.97
KRH57974	Soybean	plasma membrane	41.64	45.58
CDX69286	Canola	plasma membrane	40.33	45.09
VIT_03s0180g00150.t01	Wine grape	plasma membrane	40.33	44.97
KRG91028	Soybean	plasma membrane	41.28	44.9
CDX75634	Canola	plasma membrane	40.21	44.66
PGSC0003DMT400066225	Potato	plasma membrane	40.81	44.62
Bra011747.1-P	Field mustard	plasma membrane	40.09	44.42
Solyc02g092940.2.1	Tomato	plasma membrane	40.45	44.4
PGSC0003DMT400064235	Potato	plasma membrane	40.45	44.4
Solyc01g107650.2.1	Tomato	plasma membrane	40.57	44.36
Zm00001d005298_P001	Maize	mitochondrion, plasma membrane	43.53	44.27
CDX89556	Canola	plasma membrane	40.09	44.18
Zm00001d019701_P001	Maize	plasma membrane	43.18	44.07
CDY38934	Canola	plasma membrane	39.98	43.99
KRH33257	Soybean	cytosol, golgi, plasma membrane	15.9	43.93
KRH35733	Soybean	plasma membrane	40.57	43.85
Bra032175.1-P	Field mustard	plasma membrane	39.74	43.73
AT4G37250.1	Thale cress	plasma membrane	39.5	43.36
CDX75411	Canola	plasma membrane	37.6	42.49
Bra011508.1-P	Field mustard	plasma membrane	37.49	42.36
CDX69035	Canola	plasma membrane	37.49	42.3
Bra012148.1-P	Field mustard	plasma membrane	36.89	42.08
AT4G34220.1	Thale cress	plasma membrane	37.6	41.88
AT2G23300.1	Thale cress	plasma membrane	38.32	41.79
Bra039836.1-P	Field mustard	plasma membrane	35.47	41.7
AT5G67280.1	Thale cress	plasma membrane	37.13	41.68
CDY54466	Canola	plasma membrane	35.35	41.5
CDY52422	Canola	plasma membrane	35.23	41.25
AT2G15300.1	Thale cress	plasma membrane	35.11	39.78
CDY69287	Canola	mitochondrion	16.37	39.66
Zm00001d024047_P001	Maize	plasma membrane	31.55	35.23
Zm00001d004635_P002	Maize	plasma membrane	30.25	34.27
Zm00001d031437_P001	Maize	plasma membrane	26.57	33.84
CDY12827	Canola	plasma membrane	37.01	29.35
CDY01423	Canola	plasma membrane	37.01	29.35

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1D6P444	ProteinID:AQL04737.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855
PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF42	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0008445368	EnsemblPlantsGene:Zm00001d046626	EnsemblPlants:Zm00001d046626_P001	EnsemblPlants:Zm00001d046626_T001
SEG:seg	:	:	:	:	:

Description

Putative leucine-rich repat protein kinase family protein

Coordinates

chr9:+:99598556..99602330

Molecular Weight (calculated)

86878.4 Da

IEP (calculated)

7.483

GRAVY (calculated)

-0.073

Length

843 amino acids

Sequence
(BLAST)

001: MDGRRRGGGA MAWLLLLLAS LCTGACGLNA DGVLLMSFKN TVTADPLGAL AGWSYSDAAP CAWNGVICNG FPQDDTAPAA ANVTSASADG NGTATVARNA
101: TGATAAAGLG ASLAAATVSR VISLVLPNAQ LSGTLPPDLG RVEHLRHLDL SGNGLSGSLP PTLLNATELR VLSLAGNALS GELPDAAAAY ARGLQQLNLS
201: GNALAGRLPA ALCRLPSLLA LGLASNHLAG ELPVGGLGTL ELVDLSDNDF NGSLPSDFGG TALRLLNVSS NKLAGAVPTE LAAVVPANAT VDLSRNNFTG
301: AIPQAGPFAA QPAAAYEGNP NLCGPPLKQA CSIPSSLSKP PNATDSPPAF AAIPKNPARA PPQAQGQPPS EQDKLRPASI VAIVVGDIAG VGLLFMLFMY
401: AYHVRKKRRQ RREQDPTPPL HLQQKSARGF DGGVVKTLDI AGGKEEKAST STGCCIGRRN DSSDSSEYSA SSDGESSDEE GLKKRGSFIG RSTPQEHGSK
501: KHNLPQQQQQ APPAPATLVT VDGDGELEME TLLKASAYIL GATGSSIVYK AVLGDGTALA VRRIGESGGA EKLKDFEAQV RAVARFRHPN ILRLRGFYWG
601: ADEKLLIHDY APNGSLANIA FSRLAYIHEK KGVHGNLKPS NILLGGDMEP WIGDLGLDRL ASGEAAPHYR AGASARLFGS KRSMHSTSSL PDLSQMPGPG
701: ASPCGSASAA AAAASAAPAP YQAPECLKNL RPTAKWDVYA FGMVLLELLS GRVYSEVELC QWHAGLVAAE EHGRVLRMAD PTLRGEADGR EDALLACFRL
801: AFACCAMAPG KRPSMRDAAM VLERTAAAAA PGAAASSSGA AVP

Best Arabidopsis Sequence Match ( AT2G23300.1 )
(BLAST)

001: MKTQSASPFF FVSFFFFFFF FSSLFLLSSA LNSDGVLLLS FKYSVLLDPL SLLQSWNYDH DNPCSWRGVL CNNDSRVVTL SLPNSNLVGS IPSDLGFLQN
101: LQSLNLSNNS LNGSLPVEFF AADKLRFLDL SNNLISGEIP VSIGGLHNLQ TLNLSDNIFT GKLPANLASL GSLTEVSLKN NYFSGEFPGG GWRSVQYLDI
201: SSNLINGSLP PDFSGDNLRY LNVSYNQISG EIPPNVGAGF PQNATVDFSF NNLTGSIPDS PVYLNQKSIS FSGNPGLCGG PTRNPCPIPS SPATVSPPTS
301: TPALAAIPKS IGSNRETEPN NNSNPRTGLR PGVIIGIIVG DIAGIGILAL IFFYVYKYKN NKTVEKKNNH SLEAHEAKDT TSLSPSSSTT TSSSSPEQSS
401: RFAKWSCLRK NQETDETEEE DEENQRSGEI GENKKGTLVT IDGGEKELEV ETLLKASAYI LGATGSSIMY KTVLEDGTVL AVRRLGENGL SQQRRFKDFE
501: AHIRAIGKLV HPNLVRLRGF YWGTDEKLVI YDFVPNGSLV NARYRKGGSS PCHLPWETRL KIVKGLARGL AYLHDKKHVH GNLKPSNILL GQDMEPKIGD
601: FGLERLLAGD TSYNRASGSS RIFSSKRLTA SSREFGTIGP TPSPSPSSVG PISPYCAPES LRNLKPNPKW DVFGFGVILL ELLTGKIVSI DEVGVGNGLT
701: VEDGNRALIM ADVAIRSELE GKEDFLLGLF KLGYSCASQI PQKRPTMKEA LVVFERYPIS SSAKSPSYHY GHY

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:O22178]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.