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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY01423 Canola plasma membrane 95.2 95.2
Bra012148.1-P Field mustard plasma membrane 65.85 94.72
AT5G67280.1 Thale cress plasma membrane 60.58 85.75
CDX89556 Canola plasma membrane 40.45 56.21
CDY38934 Canola plasma membrane 40.26 55.87
KRH04528 Soybean plasma membrane 39.89 55.72
VIT_07s0129g01070.t01 Wine grape plasma membrane 40.55 55.19
CDX75634 Canola plasma membrane 38.95 54.55
CDX69286 Canola plasma membrane 38.57 54.38
KRH57974 Soybean plasma membrane 39.23 54.16
Zm00001d008868_P001 Maize endoplasmic reticulum, extracellular, plastid 3.48 52.86
PGSC0003DMT400064235 Potato plasma membrane 37.91 52.47
Solyc02g092940.2.1 Tomato plasma membrane 37.72 52.21
GSMUA_Achr4P12930_001 Banana plasma membrane, vacuole 28.22 52.08
Zm00001d045902_P001 Maize cytosol 5.46 51.79
GSMUA_Achr8P25210_001 Banana plasma membrane 31.7 49.27
GSMUA_Achr9P22590_001 Banana plasma membrane 29.73 47.88
GSMUA_Achr3P28250_001 Banana mitochondrion 26.15 47.85
GSMUA_Achr4P09420_001 Banana plasma membrane 29.63 46.12
CDX69035 Canola plasma membrane 30.95 44.04
CDX75411 Canola plasma membrane 30.86 43.97
CDY54466 Canola plasma membrane 28.5 42.2
CDY52422 Canola plasma membrane 28.5 42.08
Os09t0110100-01 Rice plasma membrane 29.63 39.67
TraesCS5B01G158000.1 Wheat plasma membrane 29.82 39.04
TraesCS5D01G165400.1 Wheat plasma membrane 29.82 39.04
TraesCS5A01G160500.1 Wheat plasma membrane 29.82 38.94
EER90087 Sorghum plasma membrane 31.7 38.87
EER98554 Sorghum plasma membrane 30.86 38.86
Zm00001d019701_P001 Maize plasma membrane 30.01 38.62
Zm00001d005298_P001 Maize mitochondrion, plasma membrane 30.1 38.6
Os06t0638500-00 Rice plasma membrane 31.42 38.13
TraesCS7D01G512900.1 Wheat plasma membrane 30.86 37.7
CDY42116 Canola plasma membrane 24.55 37.5
CDX71991 Canola vacuole 8.75 37.5
TraesCS7A01G523900.1 Wheat plasma membrane 30.67 37.43
HORVU7Hr1G116470.2 Barley plasma membrane 30.76 37.37
CDX84980 Canola plasma membrane 24.46 37.2
TraesCS7B01G441200.1 Wheat plasma membrane 30.57 37.02
Zm00001d046626_P001 Maize plasma membrane 29.35 37.01
CDY69287 Canola mitochondrion 11.95 36.49
CDX77808 Canola plasma membrane 23.05 34.75
CDY01814 Canola plasma membrane 22.95 33.89
CDX96089 Canola plasma membrane 22.77 33.8
CDY14823 Canola plasma membrane 19.66 32.66
CDX71990 Canola cytosol 10.07 32.62
CDY47962 Canola plasma membrane 19.76 32.56
CDY06072 Canola plasma membrane 19.76 32.51
CDY17688 Canola plasma membrane 23.52 32.13
CDY52887 Canola plasma membrane 20.13 31.15
CDX96123 Canola plasma membrane 10.91 29.52
CDX96124 Canola cytosol 3.01 25.6
Protein Annotations
Gene3D:1.10.418.10Gene3D:1.10.510.10Gene3D:1.20.5.1160MapMan:13.4.3.1MapMan:18.4.1.3MapMan:20.1.5.1.1
Gene3D:3.80.10.10GO:A0A078FIM3UniProt:A0A078FIM3EnsemblPlants:CDY12827ProteinID:CDY12827ProteinID:CDY12827.1
InterPro:CH-domainInterPro:CH_dom_sfInterPro:EB1_CInterPro:EB1_C_sfGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005856GO:GO:0005874GO:GO:0006464GO:GO:0006468
GO:GO:0008017GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00070459001InterPro:IPR000719InterPro:IPR001611
InterPro:IPR001715InterPro:IPR004953InterPro:IPR032675InterPro:IPR036872InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typ
InterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069PFAM:PF00307PFAM:PF03271PFAM:PF08263
PFAM:PF13855PFscan:PS50011PFscan:PS50021PFscan:PS51230PANTHER:PTHR27008PANTHER:PTHR27008:SF35
InterPro:Prot_kinase_domSUPFAM:SSF140612SUPFAM:SSF47576SUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EDC94FSEG:seg:::
Description
BnaC07g16060DBnaC07g16060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FIM3]
Coordinates
chrLK032027:-:413412..418013
Molecular Weight (calculated)
116020.0 Da
IEP (calculated)
8.078
GRAVY (calculated)
-0.329
Length
1063 amino acids
Sequence
(BLAST)
0001: MTTLAAVFRR YLFVLTVLLC DRSLALNTDG VLLLSFRYSI INDPLSVLRS WRYEDETPCS WRGVTCEESS RHVTVLSLPS SKLSGTLPSN LGSLPSLQRL
0101: DLSNNSINGS FPASLLNATE LRFLDLSRNH ISGELPASFG ASSKLNVLNL SENAFVGELP ATLGWYQNLT VISLKHNYLS GEIPGGFKST EFLDLSSNLI
0201: RGSLPLRFGG SRLRYFNASF NRISGEIPSG FADEIPENAT VDLSFNQLTG QIPGFRVLEN QESNSFSGNP ALCGSDPAKH PCRGSEATSQ PPSLTPNSPP
0301: ALAAIPNTLE PTNHPISSKA GSKSKSALKP VIIVGIVVGD IAGLAILGIV VFYIYQSRKR KTVTATSKWS TSATDSNVSS KWYCLRKTVN VDGDCEEEEE
0401: ESETSGSESD EENRVGRNRR SGLDDQDKKG TLVNLDSEKE LEIETLLKAS AYILGATGSG IMYKAVLQDS TACGLDRFRD FETQVRALAK LVHPNLVRIR
0501: GFYWGSDEKL VIYDFVPNGS LANARYRKVG SSSCHLPWEA RLKIAKGVAR GLTYIHDKKH VHGNLKPSNI LLGLDMEPKV ADFGLEKLLI GDMSYRTGGS
0601: APIFGSKRST SSHDFGPSPS PSPSSVGLPY NAPESLRSIK PNPKWDVYSF GVILLELLTG KIVVVDELGQ VNGLVIDDGD RAMRMADAAI RAELEGKEEA
0701: VLACLKMGLA CASPIPQRRP NIKEALQSRK RVGSEVKTKI GMMDSAYFVG RSEILAWINS TLQLNLSKVE EACSGAVHCQ LMDSVHPGAV PMHKVNFDAK
0801: SEYEMIQNYK VLQEVFNKLK ITKHIEVSKL VKGRPLDNLE FMQWLKKYCD SVSGGGHLHN YHALERREGC KGGKEATKRA AAATQQSGKG SSSSSVAPRP
0901: SSSNGTRRHD PPSSNTGNHH SSKAPFSKQS KPVPAAYDEK ITELKLYIDS LEKERDFYFS KLRDVEILCQ NPDTENLPLV GSIKRILYAA DGEDVGAATE
1001: TQNLSRIDEG SEERRSSGIE SQKRKLIVNL DVDAAAITTL SPRQRLSDSS DVKCTGSSPL LTC
Best Arabidopsis Sequence Match ( AT5G67280.1 )
(BLAST)
001: MMTTVAADLH RYLFLITVFL FFLCDKTSLA LTTDGVLLLS FRYSIVDDPL YVFRSWRFDD ETPCSWRGVT CDASSRHVTV LSLPSSNLTG TLPSNLGSLN
101: SLQRLDLSNN SINGSFPVSL LNATELRFLD LSDNHISGAL PASFGALSNL QVLNLSDNSF VGELPNTLGW NRNLTEISLQ KNYLSGGIPG GFKSTEYLDL
201: SSNLIKGSLP SHFRGNRLRY FNASYNRISG EIPSGFADEI PEDATVDLSF NQLTGQIPGF RVLDNQESNS FSGNPGLCGS DHAKHPCRDG EATSPPPSPT
301: PNSPPALAAI PNTIGLTNHP ISSKTGPKSK WDHKPVLIIG IVVGDLAGLA ILGIVFFYIY QSRKRKTVTA TSKWSTSSTD SKVSKWYCLR KSVYVDGDCE
401: EEEEESETSE SESDEENPVG PNRRSGLDDQ EKKGTLVNLD SEKELEIETL LKASAYILGA TGSSIMYKAV LQDGTAVAVR RIAECGLDRF RDFEAQVRAV
501: AKLIHPNLVR IRGFYWGSDE KLVIYDFVPN GSLANARYRK VGSSPCHLPW DARLKIAKGI ARGLTYVHDK KYVHGNLKPS NILLGLDMEP KVADFGLEKL
601: LIGDMSYRTG GSAPIFGSKR STTSLEFGPS PSPSPSSVGL PYNAPESLRS IKPNSKWDVY SFGVILLELL TGKIVVVDEL GQVNGLVIDD GERAIRMADS
701: AIRAELEGKE EAVLACLKMG LACASPIPQR RPNIKEALQV LERFPVHSSQ Q
Arabidopsis Description
RLKAt5g67280/K3G17_4 [Source:UniProtKB/TrEMBL;Acc:Q9FGQ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.