CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47962	Canola	plasma membrane	92.97	92.25
AT2G42290.1	Thale cress	plasma membrane	81.72	80.96
CDX71991	Canola	vacuole	27.81	71.77
CDX71990	Canola	cytosol	35.94	70.12
CDY06072	Canola	plasma membrane	69.84	69.19
VIT_08s0007g07820.t01	Wine grape	plasma membrane	59.84	59.84
KRG95336	Soybean	extracellular, plasma membrane, vacuole	58.12	57.14
KRH67019	Soybean	vacuole	57.34	56.72
PGSC0003DMT400033662	Potato	plasma membrane	54.84	55.98
Solyc03g064010.2.1	Tomato	plasma membrane	54.38	55.41
KRH71886	Soybean	plasma membrane	51.72	51.4
GSMUA_Achr3P11100_001	Banana	plasma membrane	40.62	44.75
TraesCS7A01G245400.1	Wheat	plasma membrane	45.0	44.38
TraesCS7B01G146100.1	Wheat	plasma membrane	44.84	44.22
TraesCS7D01G244000.1	Wheat	plasma membrane	44.69	44.07
GSMUA_Achr6P03450_001	Banana	plastid	42.19	43.9
Os08t0506400-01	Rice	plasma membrane	44.38	43.23
Zm00001d031437_P001	Maize	plasma membrane	44.53	43.05
KXG25642	Sorghum	plasma membrane	44.53	42.73
CDX96089	Canola	plasma membrane	43.91	39.25
CDY01814	Canola	plasma membrane	43.91	39.03
CDX84980	Canola	plasma membrane	38.91	35.62
CDY42116	Canola	plasma membrane	38.59	35.49
CDX77808	Canola	plasma membrane	36.41	33.05
CDY52887	Canola	plasma membrane	33.91	31.59
CDY17688	Canola	plasma membrane	37.34	30.72
CDX96124	Canola	cytosol	5.78	29.6
CDX75411	Canola	plasma membrane	34.06	29.22
CDX69035	Canola	plasma membrane	34.06	29.18
CDY52422	Canola	plasma membrane	32.81	29.17
CDY54466	Canola	plasma membrane	32.5	28.97
CDX69286	Canola	plasma membrane	33.44	28.38
CDX75634	Canola	plasma membrane	33.12	27.93
CDY38934	Canola	plasma membrane	33.28	27.81
CDX89556	Canola	plasma membrane	32.97	27.58
CDX96123	Canola	plasma membrane	16.88	27.48
CDY69287	Canola	mitochondrion	13.91	25.57
CDY12827	Canola	plasma membrane	32.66	19.66
CDY01423	Canola	plasma membrane	32.66	19.66

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078FR73	UniProt:A0A078FR73
EnsemblPlants:CDY14823	ProteinID:CDY14823	ProteinID:CDY14823.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00084700001	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF07714
PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF41
InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	UniParc:UPI0004EDAF83
SEG:seg	:	:	:	:	:

Description

BnaC04g48200DBnaC04g48200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FR73]

Coordinates

chrLK032047:-:569552..572194

Molecular Weight (calculated)

69743.1 Da

IEP (calculated)

7.272

GRAVY (calculated)

-0.162

Length

640 amino acids

Sequence
(BLAST)

001: MKFSWILPLL VSSISLCMTL CSSLNSDGLS LLALKSAVEN DPTKVMNHWS ESDQTPCHWS GVACTNGRVT SLNLFGKSLS GYIPSELGLL DSLNRLDLAH
101: NNFSKPVPVR LFEPTNLRYI DLSHNSLSGP IPDQIRHLKS LNHLDLSSNR LNGSLPESLT ELGSLAGTLN LSCNRFAGEI PPSYGRLPLH VTLDLSQNNL
201: TGKVPQVGSL LNQGPFAFAG NSHLCGFPSQ TPCEDFEIPN LIAAKPESTQ ELQKPNPSVI SKEEGHEKQT TGSVTVSLIS GVSVVIGAVS LSVWLIRRKQ
301: SSSAVYKTET VVAEFDEEGQ DGKFVAFGEG FQLELEDLLR ASAYVIGKSR SGIVYRVVAA EPSSSSSAVV AVRRLSDGNA TWRFKEFVNE VENIGMVSHP
401: NIVRLRAYYY AEDEKLLITD YIGNGSLYSA LHGGPSNTRS PLSWAERLHI AQGTARGLMY IHEYSSRKYV HGNLKTSKIL LDDELLPHVS GFGLTRLVHG
501: YPKLPDHSLS TNVQSFATRL SAPPQAAYLA PEARASSGYK SSQKCDVYSF GVILLELLTG CLPGGFSENG GEELVSVVRK WHKEGRSLAD ILDPKLLKQE
601: LADKQAIAAI RVALNCTDTN PELRPRMRSV SESLGRIKTV

Best Arabidopsis Sequence Match ( AT2G42290.1 )
(BLAST)

001: MKLPSILSLV VSSIFLCMSF CSSLNSDGLS LLALKSAVDN DPTRVMTHWS ESDPTPCHWS GIVCTNGRVT TLVLFGKSLS GYIPSELGLL NSLNRLDLAH
101: NNFSKTIPVR LFEATKLRYI DLSHNSLSGP IPAQIKSMKS LNHLDFSSNH LNGSLPESLT ELGSLVGTLN FSFNQFTGEI PPSYGRFRVH VSLDFSHNNL
201: TGKVPQVGSL LNQGPNAFAG NSHLCGFPLQ TPCEKIKTPN FVAAKPEGTQ ELQKPNPSVI SNDDAKEKKQ QITGSVTVSL ISGVSVVIGA VSLSVWLIRR
301: KRSSDGYNSE TKTTTVVSEF DEEGQEGKFV AFDEGFELEL EDLLRASAYV IGKSRSGIVY RVVAAESSST VVAVRRLSDG NDTWRFKDFV NEVESIGRIN
401: HPNIVRLRAY YYAEDEKLLI TDFINNGSLY SALHGGPSNT RPTLSWAERL CIAQGTARGL MYIHEYSSRK YVHGNLKSSK ILLDNELHPH VSGFGLTRLV
501: SGYPKVTDHS LSSMTQSIDQ GFATRLSVSA PAAAYLAPEA RASSDCKLSH KCDVYSFGVI LLELLTGRLP YGSSENEGEE ELVNVLRKWH KEERSLAEIL
601: DPKLLKQDFA NKQVIATIHV ALNCTEMDPD MRPRMRSVSE ILGRIK

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SLD0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.