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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75634 Canola plasma membrane 97.08 96.44
AT4G37250.1 Thale cress plasma membrane 82.23 80.73
CDX89556 Canola plasma membrane 70.56 69.54
CDY38934 Canola plasma membrane 70.42 69.32
Zm00001d008868_P001 Maize endoplasmic reticulum, extracellular, plastid 5.44 58.57
KRH04528 Soybean plasma membrane 58.09 57.56
KRH57974 Soybean plasma membrane 58.09 56.88
VIT_07s0129g01070.t01 Wine grape plasma membrane 58.89 56.85
Solyc02g092940.2.1 Tomato plasma membrane 56.23 55.21
PGSC0003DMT400064235 Potato plasma membrane 56.1 55.08
Zm00001d045902_P001 Maize cytosol 8.09 54.46
GSMUA_Achr4P12930_001 Banana plasma membrane, vacuole 40.58 53.12
GSMUA_Achr8P25210_001 Banana plasma membrane 45.89 50.58
GSMUA_Achr3P28250_001 Banana mitochondrion 38.2 49.57
GSMUA_Achr9P22590_001 Banana plasma membrane 42.71 48.79
GSMUA_Achr4P09420_001 Banana plasma membrane 42.04 46.41
CDX69035 Canola plasma membrane 44.43 44.85
CDX75411 Canola plasma membrane 44.16 44.64
CDY52422 Canola plasma membrane 41.91 43.89
CDY54466 Canola plasma membrane 41.78 43.87
EER90087 Sorghum plasma membrane 48.01 41.75
Os09t0110100-01 Rice plasma membrane 43.9 41.69
Zm00001d046626_P001 Maize plasma membrane 45.09 40.33
TraesCS5A01G160500.1 Wheat plasma membrane 43.1 39.93
TraesCS5D01G165400.1 Wheat plasma membrane 42.97 39.9
TraesCS5B01G158000.1 Wheat plasma membrane 42.84 39.78
Os06t0638500-00 Rice plasma membrane 45.89 39.5
TraesCS7A01G523900.1 Wheat plasma membrane 45.09 39.04
Zm00001d019701_P001 Maize plasma membrane 42.71 38.98
EER98554 Sorghum plasma membrane 43.5 38.86
CDY01423 Canola plasma membrane 54.77 38.85
TraesCS7D01G512900.1 Wheat plasma membrane 44.83 38.85
CDX71991 Canola vacuole 12.73 38.71
HORVU7Hr1G116470.2 Barley plasma membrane 44.83 38.63
Zm00001d005298_P001 Maize mitochondrion, plasma membrane 42.44 38.6
CDY12827 Canola plasma membrane 54.38 38.57
TraesCS7B01G441200.1 Wheat plasma membrane 44.7 38.38
CDY69287 Canola mitochondrion 17.64 38.22
CDX77808 Canola plasma membrane 34.75 37.16
CDY42116 Canola plasma membrane 33.95 36.78
CDX84980 Canola plasma membrane 33.95 36.62
CDX96089 Canola plasma membrane 34.48 36.31
CDY01814 Canola plasma membrane 34.62 36.25
CDX71990 Canola cytosol 14.99 34.45
CDY06072 Canola plasma membrane 29.18 34.06
CDY47962 Canola plasma membrane 29.05 33.95
CDY17688 Canola plasma membrane 34.62 33.55
CDY52887 Canola plasma membrane 30.5 33.48
CDY14823 Canola plasma membrane 28.38 33.44
CDX96123 Canola plasma membrane 16.84 32.32
CDX96124 Canola cytosol 4.24 25.6
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078BWU4EnsemblPlants:CDX69286
ProteinID:CDX69286ProteinID:CDX69286.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00131110001
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069PFAM:PF08263PFAM:PF13516PFscan:PS50011
PANTHER:PTHR27008PANTHER:PTHR27008:SF35InterPro:Prot_kinase_domSMART:SM00369SUPFAM:SSF52058SUPFAM:SSF56112
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EF4571SEG:seg::
Description
BnaC01g01670D
Coordinates
chrLK031789:-:3917452..3919801
Molecular Weight (calculated)
81820.4 Da
IEP (calculated)
7.568
GRAVY (calculated)
-0.209
Length
754 amino acids
Sequence
(BLAST)
001: MKMQLITAFF FFFVLCFVLG SSGLSPDGLL LMNFKSSVLV DPLSLLQTWN YSHETPCSWR GVSCNNDSKV INLSLPNSHL LGSIHSDLGS LRSLQSLDLS
101: NNSFNGPLPV SLFNGTELRS LDLSGNMISG EVPASIGDLH SLQTLNLSDN ALAGKLPANL VTLRNLTAVS LQSNYFSGEI PGGWRDVQFL DLSSNLINGS
201: LPPDFGGASL RYLNVSFNQI SGEIPPEIGA NFPINATVDL SFNNLTGSIP DSPVFLNQKS IFFSGNPGLC GDPCPISSSP STISDADSPT STPAIAAIPN
301: TISSNPVTNP ATQQTNRSPR TGLRPGVITG IVIGDIAGIG ILAVIFLYIY RRKKKNNNNN NDKQREETTD TITLSPDESR RFTKWSCLRK DPETTPSEDE
401: ESGYNADQRS RDSEGTLVTV DGEKEMEIET LLKASAYILG ARGASIMYKA VLEDGTVYAV RRLGETGLTQ RRFKDFESNI RAIGKLVHPN LVRLRGFYWG
501: ADEKLVIYDF VPNGSLVNPR YRKGGGGASS PYHLPGETRL KIARGIARGL AYLHEKKHVH GNLKPSSVLL GHDMEPRIGD LGLERLLTGE TSYSRAGGSS
601: RIFGSKRSRG SSRDFSSIGP TPSPSPSSLG PLSPYCAPES FRSLKPSPKW DVFGFGMILL ELLTGKVVSA EEVGLGIGLT VEDGHHALRM VDVTIRCELH
701: GKEDFLLSCL KLGYNCASPI PQKRPTMKES LAVLERFTPS SDVVKSPSFH YMNH
Best Arabidopsis Sequence Match ( AT4G37250.1 )
(BLAST)
001: MRMELISVIF FFFCSVLSSS ALNSDGLVLM KFKSSVLVDP LSLLQTWNYK HESPCSWRGI SCNNDSKVLT LSLPNSQLLG SIPSDLGSLL TLQSLDLSNN
101: SFNGPLPVSF FNARELRFLD LSSNMISGEI PSAIGDLHNL LTLNLSDNAL AGKLPTNLAS LRNLTVVSLE NNYFSGEIPG GWRVVEFLDL SSNLINGSLP
201: PDFGGYSLQY LNVSFNQISG EIPPEIGVNF PRNVTVDLSF NNLTGPIPDS PVFLNQESNF FSGNPGLCGE PTRNPCLIPS SPSIVSEADV PTSTPAIAAI
301: PNTIGSNPVT DPNSQQTDPN PRTGLRPGVI IGIVVGDIAG IGILAVIFLY IYRCKKNKIV DNNNNDKQRT ETDTITLSTF SSSSSSPEES RRFRKWSCLR
401: KDPETTPSEE EDEDDEDEES GYNANQRSGD NKLVTVDGEK EMEIETLLKA SAYILGATGS SIMYKAVLED GRVFAVRRLG ENGLSQRRFK DFEPHIRAIG
501: KLVHPNLVRL CGFYWGTDEK LVIYDFVPNG SLVNPRYRKG GGSSSPYHLP WETRLKIAKG IARGLAYLHE KKHVHGNLKP SNILLGHDME PKIGDFGLER
601: LLTGETSYIR AGGSSRIFSS KRYTTSSREF SSIGPTPSPS PSSVGAMSPY CAPESFRSLK PSPKWDVYGF GVILLELLTG KIVSVEEIVL GNGLTVEDGH
701: RAVRMADVAI RGELDGKQEF LLDCFKLGYS CASPVPQKRP TMKESLAVLE RFHPNSSVIK SSSFHYGH
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:UniProtKB/Swiss-Prot;Acc:C0LGS3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.