CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42116	Canola	plasma membrane	97.42	97.84
AT1G25320.1	Thale cress	plasma membrane	86.7	86.32
GSMUA_Achr3P21080_001	Banana	plasma membrane	47.64	61.44
GSMUA_Achr9P21500_001	Banana	plasma membrane	52.79	59.81
GSMUA_Achr3P29400_001	Banana	plasma membrane	50.5	59.53
CDX77808	Canola	plasma membrane	59.08	58.58
GSMUA_Achr8P18330_001	Banana	plasma membrane	44.78	58.4
Os01t0514700-01	Rice	plasma membrane	57.22	56.74
TraesCS1A01G240300.1	Wheat	plasma membrane	56.51	56.51
GSMUA_Achr4P06720_001	Banana	plasma membrane	48.07	55.72
EES03041	Sorghum	plasma membrane	56.37	55.34
HORVU1Hr1G056920.1	Barley	plasma membrane	55.94	54.92
CDY17688	Canola	plasma membrane	60.37	54.24
TraesCS1B01G252400.1	Wheat	plasma membrane	56.65	54.1
TraesCS1D01G240400.1	Wheat	plasma membrane, plastid	57.08	53.92
CDY52887	Canola	plasma membrane	44.21	44.98
CDX96123	Canola	plasma membrane	25.04	44.53
CDX71991	Canola	vacuole	14.88	41.94
CDX71990	Canola	cytosol	19.6	41.77
CDX96089	Canola	plasma membrane	42.35	41.34
CDY01814	Canola	plasma membrane	42.49	41.25
CDY06072	Canola	plasma membrane	36.34	39.32
CDY47962	Canola	plasma membrane	36.19	39.22
CDY14823	Canola	plasma membrane	35.62	38.91
CDX96124	Canola	cytosol	6.44	36.0
CDX69035	Canola	plasma membrane	37.34	34.94
CDX75411	Canola	plasma membrane	37.2	34.85
CDY38934	Canola	plasma membrane	37.77	34.46
CDX89556	Canola	plasma membrane	37.48	34.25
CDX69286	Canola	plasma membrane	36.62	33.95
CDY52422	Canola	plasma membrane	34.62	33.61
CDX75634	Canola	plasma membrane	36.34	33.47
CDY54466	Canola	plasma membrane	34.19	33.29
CDY69287	Canola	mitochondrion	15.59	31.32
CDY12827	Canola	plasma membrane	37.2	24.46
CDY01423	Canola	plasma membrane	37.05	24.36

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078D784	EnsemblPlants:CDX84980
ProteinID:CDX84980	ProteinID:CDX84980.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00142384001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	PFscan:PS50011
PANTHER:PTHR27008	PANTHER:PTHR27008:SF11	InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EEEC2C	SEG:seg	:	:

Description

BnaC05g20750D

Coordinates

chrLK031839:+:1057057..1059933

Molecular Weight (calculated)

76050.0 Da

IEP (calculated)

6.411

GRAVY (calculated)

-0.064

Length

699 amino acids

Sequence
(BLAST)

001: MSVGSLLLLL LLILNFNGEL NALNDEGYAL LALKQSISRD PDGSLTNWDS ENQTPCSWNG VTCDDHSLVV SLSIPKKKLS GHLPSSLGSL SNLRHLNLRS
101: NELTGTLPLE LFRAQRLQSL VLYGNSLSGS IPKEVGDLKL LQSLDLSRNG LDGPIPDSIL ECKRLRSLGL SQNNLTGSVP SGFGRALGLL QKLDLSYNNL
201: NGLIPDDLGN LSRLQGTLDL SHNSFSGSIP ASLGSLPEKV YVDLAHNNLS GPIPQTGALV NRGPTAFLGN PRLCGPPLKD PCLPEDSPTS HPFVPEGESK
301: KGGRGGGLSK SAVIAIVVCD VIGICIVGFL FSCCYLKLCS RRNTVDEEGH VLEKECKEKK GSSFCFRRDG SESPSSENLE TQHDLVLLDK HMALDLDELL
401: KASAFVLGKG GNGIVYKVVL EDGVTVAVRR LGEGGSQRCK EFQTEVEAIG KLRHPNIVSL KAYYWSVEEK LLIYDYIPNG SLANALHGNP SMVSFKPLAW
501: DVRLKIMRGI ARGLLYLHEF SPKKYVHGSL KLSNILLGQD MEPRISDFGL MHLSSIAGTL ETTTVDHPSS NKSASSIGPL ANLSSFYQAP EAMKATVKPS
601: QKWDVYSFGV ILLEMITGRL PIVFVGKTEM EIVKWIQMCI DEKKEMSDIL DPYLVPEDTE IEEEVIAVLK VAMACVSISP EKRPAMKHVA DALNQIFLQ

Best Arabidopsis Sequence Match ( AT1G25320.1 )
(BLAST)

001: MSVGSLLFMF LLIWNFNGEL NALNDEGFAL LTLKQSISKD PDGSLSNWNS ENQNPCSWNG VTCDDNKVVV SLSIPKKKLL GYLPSSLGLL SNLRHLNLRS
101: NELSGNLPVE LFKAQGLQSL VLYGNFLSGS IPNEIGDLKF LQILDLSRNS LNGSIPESVL KCNRLRSFDL SQNNLTGSVP SGFGQSLASL QKLDLSSNNL
201: IGLVPDDLGN LTRLQGTLDL SHNSFSGSIP ASLGNLPEKV YVNLAYNNLS GPIPQTGALV NRGPTAFLGN PRLCGPPLKD PCLPDTDSSS TSHPFVPDNN
301: EQGGGGSKKG EGLSKTAIVA IVVCDFIGIC IVGFLFSCCY LKICARRNSV DEEGYVLEKE GKEKKGSFCF RRDGSESPSS ENLEPQQDLV LLDKHIALDL
401: DELLKASAFV LGKGGNGIVY KVVLEDGLTV AVRRLGEGGS QRCKEFQTEV EAIGKLRHPN IVSLKAYYWS VEEKLLIYDY IPNGSLTNAL HGNPGMVSFK
501: PLSWGVRLKI MRGISRGLVY LHEFSPKKYV HGSLKLSNIL LGQDMEPHIS DFGLMHLSSI AGTLESTTVD RPSNKTASSI GSSANLSSFY LAPEATKATV
601: KPSQKWDVYS FGVILLEMIT GRLPIVFVGK SEMEIVKWIQ MCIDEKKEMS DILDPYLVPN DTEIEEEVIA VLKIAMACVS TSPEKRPPMK HIADALTQIC
701: LQ

Arabidopsis Description

At1g25320/F4F7_17 [Source:UniProtKB/TrEMBL;Acc:Q9FRI1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.