Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 6
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84980 | Canola | plasma membrane | 86.32 | 86.7 |
| Bra024761.1-P | Field mustard | plasma membrane | 85.47 | 86.21 |
| CDY42116 | Canola | plasma membrane | 85.33 | 86.06 |
| GSMUA_Achr9P21500_001 | Banana | plasma membrane | 52.56 | 59.81 |
| GSMUA_Achr3P21080_001 | Banana | plasma membrane | 46.15 | 59.78 |
| GSMUA_Achr3P29400_001 | Banana | plasma membrane | 50.28 | 59.53 |
| AT2G01210.1 | Thale cress | plasma membrane | 59.97 | 58.8 |
| GSMUA_Achr8P18330_001 | Banana | plasma membrane | 43.3 | 56.72 |
| GSMUA_Achr4P06720_001 | Banana | plasma membrane | 48.72 | 56.72 |
| TraesCS1A01G240300.1 | Wheat | plasma membrane | 56.27 | 56.51 |
| Os01t0514700-01 | Rice | plasma membrane | 56.27 | 56.03 |
| HORVU1Hr1G056920.1 | Barley | plasma membrane | 55.84 | 55.06 |
| EES03041 | Sorghum | plasma membrane | 55.56 | 54.78 |
| TraesCS1B01G252400.1 | Wheat | plasma membrane | 56.27 | 53.96 |
| TraesCS1D01G240400.1 | Wheat | plasma membrane, plastid | 56.55 | 53.65 |
| AT1G66830.1 | Thale cress | plasma membrane | 45.73 | 46.86 |
| AT1G67510.1 | Thale cress | plasma membrane | 42.02 | 41.03 |
| AT3G57830.1 | Thale cress | plasma membrane | 35.61 | 37.76 |
| AT2G42290.1 | Thale cress | plasma membrane | 34.62 | 37.62 |
| AT5G67280.1 | Thale cress | plasma membrane | 37.32 | 34.89 |
| AT4G37250.1 | Thale cress | plasma membrane | 37.89 | 34.64 |
| AT4G34220.1 | Thale cress | plasma membrane | 37.04 | 34.35 |
| AT2G15300.1 | Thale cress | plasma membrane | 36.18 | 34.14 |
| AT2G23300.1 | Thale cress | plasma membrane | 37.46 | 34.02 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.3 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | EntrezGene:839116 | ProteinID:AAG28814.1 |
| ProteinID:AEE30606.1 | ArrayExpress:AT1G25320 | EnsemblPlantsGene:AT1G25320 | RefSeq:AT1G25320 | TAIR:AT1G25320 | RefSeq:AT1G25320-TAIR-G |
| EnsemblPlants:AT1G25320.1 | TAIR:AT1G25320.1 | EMBL:AY056441 | Unigene:At.48236 | EMBL:BT010471 | EMBL:FJ708637 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | RefSeq:NP_564228.1 |
| PFAM:PF00069 | PFAM:PF00560 | PFAM:PF08263 | PFAM:PF13855 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PRINTS:PR00019 | PFscan:PS50011 | PANTHER:PTHR27008 | PANTHER:PTHR27008:SF11 | InterPro:Prot_kinase_dom | UniProt:Q9FRI1 |
| SMART:SM00369 | SUPFAM:SSF52058 | SUPFAM:SSF56112 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000009DFFE |
| SEG:seg | : | : | : | : | : |
Description
At1g25320/F4F7_17 [Source:UniProtKB/TrEMBL;Acc:Q9FRI1]
Coordinates
chr1:+:8877790..8880388
Molecular Weight (calculated)
76435.1 Da
IEP (calculated)
6.161
GRAVY (calculated)
-0.073
Length
702 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVGSLLFMF LLIWNFNGEL NALNDEGFAL LTLKQSISKD PDGSLSNWNS ENQNPCSWNG VTCDDNKVVV SLSIPKKKLL GYLPSSLGLL SNLRHLNLRS
101: NELSGNLPVE LFKAQGLQSL VLYGNFLSGS IPNEIGDLKF LQILDLSRNS LNGSIPESVL KCNRLRSFDL SQNNLTGSVP SGFGQSLASL QKLDLSSNNL
201: IGLVPDDLGN LTRLQGTLDL SHNSFSGSIP ASLGNLPEKV YVNLAYNNLS GPIPQTGALV NRGPTAFLGN PRLCGPPLKD PCLPDTDSSS TSHPFVPDNN
301: EQGGGGSKKG EGLSKTAIVA IVVCDFIGIC IVGFLFSCCY LKICARRNSV DEEGYVLEKE GKEKKGSFCF RRDGSESPSS ENLEPQQDLV LLDKHIALDL
401: DELLKASAFV LGKGGNGIVY KVVLEDGLTV AVRRLGEGGS QRCKEFQTEV EAIGKLRHPN IVSLKAYYWS VEEKLLIYDY IPNGSLTNAL HGNPGMVSFK
501: PLSWGVRLKI MRGISRGLVY LHEFSPKKYV HGSLKLSNIL LGQDMEPHIS DFGLMHLSSI AGTLESTTVD RPSNKTASSI GSSANLSSFY LAPEATKATV
601: KPSQKWDVYS FGVILLEMIT GRLPIVFVGK SEMEIVKWIQ MCIDEKKEMS DILDPYLVPN DTEIEEEVIA VLKIAMACVS TSPEKRPPMK HIADALTQIC
701: LQ
101: NELSGNLPVE LFKAQGLQSL VLYGNFLSGS IPNEIGDLKF LQILDLSRNS LNGSIPESVL KCNRLRSFDL SQNNLTGSVP SGFGQSLASL QKLDLSSNNL
201: IGLVPDDLGN LTRLQGTLDL SHNSFSGSIP ASLGNLPEKV YVNLAYNNLS GPIPQTGALV NRGPTAFLGN PRLCGPPLKD PCLPDTDSSS TSHPFVPDNN
301: EQGGGGSKKG EGLSKTAIVA IVVCDFIGIC IVGFLFSCCY LKICARRNSV DEEGYVLEKE GKEKKGSFCF RRDGSESPSS ENLEPQQDLV LLDKHIALDL
401: DELLKASAFV LGKGGNGIVY KVVLEDGLTV AVRRLGEGGS QRCKEFQTEV EAIGKLRHPN IVSLKAYYWS VEEKLLIYDY IPNGSLTNAL HGNPGMVSFK
501: PLSWGVRLKI MRGISRGLVY LHEFSPKKYV HGSLKLSNIL LGQDMEPHIS DFGLMHLSSI AGTLESTTVD RPSNKTASSI GSSANLSSFY LAPEATKATV
601: KPSQKWDVYS FGVILLEMIT GRLPIVFVGK SEMEIVKWIQ MCIDEKKEMS DILDPYLVPN DTEIEEEVIA VLKIAMACVS TSPEKRPPMK HIADALTQIC
701: LQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.