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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75634 Canola plasma membrane 81.51 82.48
Bra011747.1-P Field mustard plasma membrane 81.51 82.26
CDX69286 Canola plasma membrane 80.73 82.23
AT2G23300.1 Thale cress plasma membrane 75.0 74.51
Zm00001d008868_P001 Maize endoplasmic reticulum, extracellular, plastid 5.6 61.43
KRH04528 Soybean plasma membrane 58.59 59.13
KRH57974 Soybean plasma membrane 58.98 58.83
VIT_07s0129g01070.t01 Wine grape plasma membrane 58.72 57.75
AT5G67280.1 Thale cress plasma membrane 55.99 57.26
Solyc02g092940.2.1 Tomato plasma membrane 55.73 55.73
PGSC0003DMT400064235 Potato plasma membrane 55.21 55.21
GSMUA_Achr4P12930_001 Banana plasma membrane, vacuole 41.02 54.69
Zm00001d045902_P001 Maize cytosol 7.68 52.68
GSMUA_Achr8P25210_001 Banana plasma membrane 45.83 51.46
GSMUA_Achr9P22590_001 Banana plasma membrane 43.23 50.3
GSMUA_Achr3P28250_001 Banana mitochondrion 37.63 49.74
GSMUA_Achr4P09420_001 Banana plasma membrane 41.67 46.85
AT2G15300.1 Thale cress plasma membrane 43.1 44.49
AT4G34220.1 Thale cress plasma membrane 43.62 44.25
Os09t0110100-01 Rice plasma membrane 42.84 41.44
EER90087 Sorghum plasma membrane 46.09 40.83
TraesCS5D01G165400.1 Wheat plasma membrane 42.71 40.39
TraesCS5A01G160500.1 Wheat plasma membrane 42.58 40.17
TraesCS5B01G158000.1 Wheat plasma membrane 42.45 40.15
Os06t0638500-00 Rice plasma membrane 45.18 39.61
Zm00001d046626_P001 Maize plasma membrane 43.36 39.5
EER98554 Sorghum plasma membrane 42.84 38.98
TraesCS7A01G523900.1 Wheat plasma membrane 43.1 38.0
HORVU7Hr1G116470.2 Barley plasma membrane 43.23 37.94
TraesCS7D01G512900.1 Wheat plasma membrane 42.97 37.93
Zm00001d019701_P001 Maize plasma membrane 40.76 37.89
AT1G25320.1 Thale cress plasma membrane 34.64 37.89
Zm00001d005298_P001 Maize mitochondrion, plasma membrane 40.89 37.88
TraesCS7B01G441200.1 Wheat plasma membrane 43.1 37.7
AT2G01210.1 Thale cress plasma membrane 33.72 36.17
AT1G67510.1 Thale cress plasma membrane 33.33 35.6
AT2G42290.1 Thale cress plasma membrane 29.3 34.83
AT1G66830.1 Thale cress plasma membrane 30.6 34.31
AT3G57830.1 Thale cress plasma membrane 28.91 33.53
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:829879ProteinID:AEE86773.1
EMBL:AK317633ArrayExpress:AT4G37250EnsemblPlantsGene:AT4G37250RefSeq:AT4G37250TAIR:AT4G37250RefSeq:AT4G37250-TAIR-G
EnsemblPlants:AT4G37250.1TAIR:AT4G37250.1EMBL:AY065068Unigene:At.27846EMBL:BT002237UniProt:C0LGS3
ProteinID:CAB16774.1ProteinID:CAB80391.1EMBL:FJ708765GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
RefSeq:NP_195442.2PFAM:PF00069PFAM:PF08263PFAM:PF13516PO:PO:0000013PO:PO:0000037
PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PFscan:PS50011PANTHER:PTHR27008
PANTHER:PTHR27008:SF35InterPro:Prot_kinase_domSUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0000196F2BSEG:seg::::
Description
Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:UniProtKB/Swiss-Prot;Acc:C0LGS3]
Coordinates
chr4:-:17527642..17530589
Molecular Weight (calculated)
84067.9 Da
IEP (calculated)
6.092
GRAVY (calculated)
-0.221
Length
768 amino acids
Sequence
(BLAST)
001: MRMELISVIF FFFCSVLSSS ALNSDGLVLM KFKSSVLVDP LSLLQTWNYK HESPCSWRGI SCNNDSKVLT LSLPNSQLLG SIPSDLGSLL TLQSLDLSNN
101: SFNGPLPVSF FNARELRFLD LSSNMISGEI PSAIGDLHNL LTLNLSDNAL AGKLPTNLAS LRNLTVVSLE NNYFSGEIPG GWRVVEFLDL SSNLINGSLP
201: PDFGGYSLQY LNVSFNQISG EIPPEIGVNF PRNVTVDLSF NNLTGPIPDS PVFLNQESNF FSGNPGLCGE PTRNPCLIPS SPSIVSEADV PTSTPAIAAI
301: PNTIGSNPVT DPNSQQTDPN PRTGLRPGVI IGIVVGDIAG IGILAVIFLY IYRCKKNKIV DNNNNDKQRT ETDTITLSTF SSSSSSPEES RRFRKWSCLR
401: KDPETTPSEE EDEDDEDEES GYNANQRSGD NKLVTVDGEK EMEIETLLKA SAYILGATGS SIMYKAVLED GRVFAVRRLG ENGLSQRRFK DFEPHIRAIG
501: KLVHPNLVRL CGFYWGTDEK LVIYDFVPNG SLVNPRYRKG GGSSSPYHLP WETRLKIAKG IARGLAYLHE KKHVHGNLKP SNILLGHDME PKIGDFGLER
601: LLTGETSYIR AGGSSRIFSS KRYTTSSREF SSIGPTPSPS PSSVGAMSPY CAPESFRSLK PSPKWDVYGF GVILLELLTG KIVSVEEIVL GNGLTVEDGH
701: RAVRMADVAI RGELDGKQEF LLDCFKLGYS CASPVPQKRP TMKESLAVLE RFHPNSSVIK SSSFHYGH
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.