Factsheet for VIT_07s0129g01070.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008868_P001	Maize	endoplasmic reticulum, extracellular, plastid	6.02	67.14
KRH04528	Soybean	plasma membrane	64.28	65.97
Solyc02g092940.2.1	Tomato	plasma membrane	64.4	65.49
PGSC0003DMT400064235	Potato	plasma membrane	64.28	65.36
KRH57974	Soybean	plasma membrane	63.51	64.42
CDX89556	Canola	plasma membrane	58.9	60.13
CDY38934	Canola	plasma membrane	58.51	59.66
CDX75634	Canola	plasma membrane	57.87	59.55
Bra032175.1-P	Field mustard	plasma membrane	58.26	59.4
AT2G23300.1	Thale cress	plasma membrane	58.51	59.12
Zm00001d045902_P001	Maize	cytosol	8.45	58.93
CDX69286	Canola	plasma membrane	56.85	58.89
Bra011747.1-P	Field mustard	plasma membrane	57.36	58.87
AT4G37250.1	Thale cress	plasma membrane	57.75	58.72
Bra012148.1-P	Field mustard	plasma membrane	54.93	58.05
GSMUA_Achr4P12930_001	Banana	plasma membrane, vacuole	42.64	57.81
VIT_03s0180g00150.t01	Wine grape	plasma membrane	55.57	57.41
AT5G67280.1	Thale cress	plasma membrane	55.19	57.39
GSMUA_Achr8P25210_001	Banana	plasma membrane	49.17	56.14
GSMUA_Achr3P28250_001	Banana	mitochondrion	41.23	55.42
GSMUA_Achr9P22590_001	Banana	plasma membrane	45.45	53.79
GSMUA_Achr4P09420_001	Banana	plasma membrane	42.38	48.46
Os09t0110100-01	Rice	plasma membrane	46.73	45.97
TraesCS5D01G165400.1	Wheat	plasma membrane	45.2	43.47
TraesCS5A01G160500.1	Wheat	plasma membrane	45.2	43.37
EER90087	Sorghum	plasma membrane	47.76	43.02
TraesCS5B01G158000.1	Wheat	plasma membrane	44.56	42.86
EER98554	Sorghum	plasma membrane	46.22	42.77
Zm00001d046626_P001	Maize	plasma membrane	45.97	42.59
Os06t0638500-00	Rice	plasma membrane	47.5	42.35
Zm00001d005298_P001	Maize	mitochondrion, plasma membrane	44.56	41.98
Zm00001d019701_P001	Maize	plasma membrane	43.92	41.53
TraesCS7D01G512900.1	Wheat	plasma membrane	46.22	41.49
TraesCS7A01G523900.1	Wheat	plasma membrane	46.22	41.45
CDY01423	Canola	plasma membrane	55.95	41.11
HORVU7Hr1G116470.2	Barley	plasma membrane	45.97	41.03
TraesCS7B01G441200.1	Wheat	plasma membrane	45.97	40.89
CDY12827	Canola	plasma membrane	55.19	40.55
VIT_01s0011g04060.t01	Wine grape	plasma membrane	36.88	40.39
VIT_01s0010g02910.t01	Wine grape	plasma membrane	33.03	36.39
VIT_08s0007g07820.t01	Wine grape	plasma membrane	28.81	35.16

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100261029	wikigene:100261029	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CCB57799	ProteinID:CCB57799.1	UniProt:F6HSY9	EMBL:FN596246	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100261029	wikigene:LOC100261029	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	PFscan:PS50011	PANTHER:PTHR27008
PANTHER:PTHR27008:SF35	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	TMHMM:TMhelix	UniParc:UPI000198397F
ArrayExpress:VIT_07s0129g01070	EnsemblPlantsGene:VIT_07s0129g01070	EnsemblPlants:VIT_07s0129g01070.t01	RefSeq:XP_002278529	RefSeq:XP_002278529.1	SEG:seg

Description

No Description!

Coordinates

chr7:+:16228492..16231259

Molecular Weight (calculated)

83799.6 Da

IEP (calculated)

6.026

GRAVY (calculated)

-0.190

Length

781 amino acids

Sequence
(BLAST)

001: MKSTSVGLHL WWRILSFVLL LVQSFGINRD GILLLSLKYS VLSDPLSALE SWNHYDETPC SWKGVRCSSP GMLDTCSRVI ALSLSNFQLL GSIPDDLGMI
101: EHLRNLDLSN NAFNGSLPLS LFNASELQVM DLSNNLISGE LPEVDGGLAS LQLLNLSDNA LAGRIPDYLS TLNNLTSVSL KNNYFSGGLP SGVASIEVLD
201: LSSNLINGSL PPDFGGESLG YLNISYNRLS GSIPLEFAQN IPESAILDLS FNNLTGEIPE ANVLYNQQTK SFSGNTGLCG KPLKAPCPIP STLYNATEPT
301: SPPAIAAMPK TIDSTPVTSP GTTNGSRKQD ENGLRPATIV GIVLGDIVGV GILAVIFLYV YQWKKKKNVA NAIKTEKNET NSAKDIWSSS SSSSETRGVT
401: AWSCLPKRGD EEDSTETTGS DGEEEQTMQT GHSNQRQQEQ QKQGGGGGGG GGGGALVTVD GEKELELETL LKASAYILGA TGSSIMYKAV LEDGTTLAVR
501: RIGESGVERF RDFENQVKVI AKLVHPNLVR IRGFYWGVDE KLVIYDFVPN GSLASARYRK VGSSPCHMPW EVRLKVAKGA ARGLTYLHDK KHVHGNLKPS
601: NILLGIDMEP KIGDFGLERL VSGETSYKAG GSARNFGSKR STASRDSFQD MPVGPSPSPS PSSLGVSPYH APESLRSLKP NPKWDVFSFG VILLELLTGK
701: VIVSDDLGLG LASEDKGRVL RMADAAIRAD LEGKEDALLA CFKLGFSCVS PAPQKRPSMK EAVQVLEKIP SSSSSSSYYA H

Best Arabidopsis Sequence Match ( AT4G37250.1 )
(BLAST)

001: MRMELISVIF FFFCSVLSSS ALNSDGLVLM KFKSSVLVDP LSLLQTWNYK HESPCSWRGI SCNNDSKVLT LSLPNSQLLG SIPSDLGSLL TLQSLDLSNN
101: SFNGPLPVSF FNARELRFLD LSSNMISGEI PSAIGDLHNL LTLNLSDNAL AGKLPTNLAS LRNLTVVSLE NNYFSGEIPG GWRVVEFLDL SSNLINGSLP
201: PDFGGYSLQY LNVSFNQISG EIPPEIGVNF PRNVTVDLSF NNLTGPIPDS PVFLNQESNF FSGNPGLCGE PTRNPCLIPS SPSIVSEADV PTSTPAIAAI
301: PNTIGSNPVT DPNSQQTDPN PRTGLRPGVI IGIVVGDIAG IGILAVIFLY IYRCKKNKIV DNNNNDKQRT ETDTITLSTF SSSSSSPEES RRFRKWSCLR
401: KDPETTPSEE EDEDDEDEES GYNANQRSGD NKLVTVDGEK EMEIETLLKA SAYILGATGS SIMYKAVLED GRVFAVRRLG ENGLSQRRFK DFEPHIRAIG
501: KLVHPNLVRL CGFYWGTDEK LVIYDFVPNG SLVNPRYRKG GGSSSPYHLP WETRLKIAKG IARGLAYLHE KKHVHGNLKP SNILLGHDME PKIGDFGLER
601: LLTGETSYIR AGGSSRIFSS KRYTTSSREF SSIGPTPSPS PSSVGAMSPY CAPESFRSLK PSPKWDVYGF GVILLELLTG KIVSVEEIVL GNGLTVEDGH
701: RAVRMADVAI RGELDGKQEF LLDCFKLGYS CASPVPQKRP TMKESLAVLE RFHPNSSVIK SSSFHYGH

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:UniProtKB/Swiss-Prot;Acc:C0LGS3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.