Factsheet for GSMUA_Achr4P09420_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 3
plasma membrane 4
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P22740_001
GSMUA_Achr4P17470_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G15300.1	GSMUA_Achr1P22740_001	AT5G35750.1	18642946
AT2G15300.1	GSMUA_Achr4P17470_001	AT5G35750.1	18642946
AT2G15300.1	GSMUA_AchrUn_...	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008868_P001	Maize	endoplasmic reticulum, extracellular, plastid	7.61	74.29
GSMUA_Achr8P25210_001	Banana	plasma membrane	71.16	71.05
Zm00001d045902_P001	Maize	cytosol	11.27	68.75
GSMUA_Achr3P28250_001	Banana	mitochondrion	51.39	60.41
GSMUA_Achr4P12930_001	Banana	plasma membrane, vacuole	49.49	58.68
GSMUA_Achr9P22590_001	Banana	plasma membrane	55.49	57.42
EER90087	Sorghum	plasma membrane	56.81	44.75
Os06t0638500-00	Rice	plasma membrane	56.81	44.29
Zm00001d046626_P001	Maize	plasma membrane	53.44	43.3
VIT_03s0180g00150.t01	Wine grape	plasma membrane	47.58	42.99
KRH04528	Soybean	plasma membrane	47.88	42.97
VIT_07s0129g01070.t01	Wine grape	plasma membrane	48.46	42.38
KRG91028	Soybean	plasma membrane	48.02	42.32
KRH57974	Soybean	plasma membrane	47.58	42.21
Bra012148.1-P	Field mustard	plasma membrane	45.53	42.08
TraesCS7D01G512900.1	Wheat	plasma membrane	53.59	42.07
HORVU7Hr1G116470.2	Barley	plasma membrane	53.88	42.06
CDX69286	Canola	plasma membrane	46.41	42.04
Solyc01g107650.2.1	Tomato	plasma membrane	47.44	42.02
TraesCS7A01G523900.1	Wheat	plasma membrane	53.44	41.91
Os09t0110100-01	Rice	plasma membrane	48.61	41.81
TraesCS7B01G441200.1	Wheat	plasma membrane	53.73	41.8
Bra011747.1-P	Field mustard	plasma membrane	46.56	41.79
CDX75634	Canola	plasma membrane	46.41	41.77
TraesCS5B01G158000.1	Wheat	plasma membrane	49.63	41.75
TraesCS5D01G165400.1	Wheat	plasma membrane	49.63	41.75
AT4G37250.1	Thale cress	plasma membrane	46.85	41.67
PGSC0003DMT400066225	Potato	plasma membrane	47.0	41.63
PGSC0003DMT400066550	Potato	endoplasmic reticulum, plasma membrane	18.45	41.58
CDX89556	Canola	plasma membrane	46.56	41.57
TraesCS5A01G160500.1	Wheat	plasma membrane	49.05	41.15
KRH35733	Soybean	plasma membrane	47.0	41.15
CDY38934	Canola	plasma membrane	46.12	41.12
AT2G23300.1	Thale cress	plasma membrane	46.27	40.88
AT5G67280.1	Thale cress	plasma membrane	44.95	40.88
Bra032175.1-P	Field mustard	plasma membrane	45.83	40.86
Solyc02g092940.2.1	Tomato	plasma membrane	45.83	40.76
PGSC0003DMT400064235	Potato	plasma membrane	45.83	40.76
CDX69035	Canola	plasma membrane	43.92	40.16
CDX75411	Canola	plasma membrane	43.78	40.08
Bra011508.1-P	Field mustard	plasma membrane	43.48	39.81
GSMUA_Achr8P18330_001	Banana	plasma membrane	31.04	39.55
Bra039836.1-P	Field mustard	plasma membrane	41.29	39.33
CDY52422	Canola	plasma membrane	41.29	39.17
GSMUA_Achr3P21080_001	Banana	plasma membrane	31.04	39.11
AT4G34220.1	Thale cress	plasma membrane	43.34	39.1
CDY54466	Canola	plasma membrane	41.0	39.0
AT2G15300.1	Thale cress	plasma membrane	42.46	38.98
GSMUA_Achr3P29400_001	Banana	plasma membrane	33.82	38.95
EER98554	Sorghum	plasma membrane	48.02	38.86
Zm00001d019701_P001	Maize	plasma membrane	47.0	38.86
Zm00001d005298_P001	Maize	mitochondrion, plasma membrane	45.83	37.76
KRH33257	Soybean	cytosol, golgi, plasma membrane	16.84	37.7
GSMUA_Achr4P06720_001	Banana	plasma membrane	33.24	37.65
GSMUA_Achr9P21500_001	Banana	plasma membrane	33.82	37.44
CDY69287	Canola	mitochondrion	18.3	35.92
GSMUA_Achr1P13440_001	Banana	plasma membrane	29.14	34.91
GSMUA_Achr3P11100_001	Banana	plasma membrane	29.58	34.77
GSMUA_Achr6P03450_001	Banana	plastid	29.87	33.17
CDY01423	Canola	plasma membrane	46.56	29.92
CDY12827	Canola	plasma membrane	46.12	29.63
GSMUA_Achr6P28540_001	Banana	vacuole	25.18	26.5

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G09420_001	EnsemblPlants:GSMUA_Achr4P09420_001
EnsemblPlants:GSMUA_Achr4T09420_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0SMF9	PFAM:PF00069	PFAM:PF00560
PFAM:PF08263	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF42	InterPro:Prot_kinase_dom	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF56112	TMHMM:TMhelix	UniParc:UPI0002964906	SEG:seg	:

Description

Putative Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:GMGC_GENE;Acc:GSMUA_Achr4G09420_001]

Coordinates

chr4:+:6840568..6843692

Molecular Weight (calculated)

73960.9 Da

IEP (calculated)

9.735

GRAVY (calculated)

-0.054

Length

683 amino acids

Sequence
(BLAST)

001: MSSQGSRLQS KWQATTRSLP PLLTLLVLVS PVLALGQDGV LLLKFKSSIL SDPLAVLRDW NYYDATPCSW NGVVCMGGGN VQVPTASRVI GLVLPNSRLL
101: GSVPPELGLL EHLRHLDLSG NMLNGTLPPS LFDASELRVL NLSDNALIGR LPANLSRLPN LTYLDLSSNL VNGSLPTDLG GPRLRYLNLS YNRLTGAIPL
201: ELGATIPANA TVDLSFNNLT GEIPHGGAFA AEKPMAFVGN PSLCGRPLRN PCAIPSIPST NTDGTSPAGG GQSSAGRGTL RPFAVIAITV GDLAGVGILF
301: VVFLYLYHVT PRRHRRLRDP PRRRENWKKR QREKRTTELE IETLLKASAY ILGASASSIV YKAVLADGTA LAVRRIGEGS VIGKLKDFGA QVRSLAKFRH
401: PNLLRLRGFS WGADEKLLIH DYAPNGSLAN ISLSKKLGSS PLHLSWEARL RIARGVARGL AYIHEKKCSH GNLKPSNILL DSDMEPKIGD FGLDRVMLGA
501: GAPSAASGSS SSALAPPPYQ APESLKNLKP SAKWDVYSFG MVLLELVAGR VFSEVELCHW NAGLVVEERN RLLRMADAAI RGEVEGKEEA LLCCIKLGFA
601: CCAMAPQRRP SMKEAVQVLD NISPLPLPHP QSANVLLSNH SKCNPEEQLL KVIHATEERA KEDIKRMELF PMSTSFLKVQ YTD

Best Arabidopsis Sequence Match ( AT4G37250.1 )
(BLAST)

001: MRMELISVIF FFFCSVLSSS ALNSDGLVLM KFKSSVLVDP LSLLQTWNYK HESPCSWRGI SCNNDSKVLT LSLPNSQLLG SIPSDLGSLL TLQSLDLSNN
101: SFNGPLPVSF FNARELRFLD LSSNMISGEI PSAIGDLHNL LTLNLSDNAL AGKLPTNLAS LRNLTVVSLE NNYFSGEIPG GWRVVEFLDL SSNLINGSLP
201: PDFGGYSLQY LNVSFNQISG EIPPEIGVNF PRNVTVDLSF NNLTGPIPDS PVFLNQESNF FSGNPGLCGE PTRNPCLIPS SPSIVSEADV PTSTPAIAAI
301: PNTIGSNPVT DPNSQQTDPN PRTGLRPGVI IGIVVGDIAG IGILAVIFLY IYRCKKNKIV DNNNNDKQRT ETDTITLSTF SSSSSSPEES RRFRKWSCLR
401: KDPETTPSEE EDEDDEDEES GYNANQRSGD NKLVTVDGEK EMEIETLLKA SAYILGATGS SIMYKAVLED GRVFAVRRLG ENGLSQRRFK DFEPHIRAIG
501: KLVHPNLVRL CGFYWGTDEK LVIYDFVPNG SLVNPRYRKG GGSSSPYHLP WETRLKIAKG IARGLAYLHE KKHVHGNLKP SNILLGHDME PKIGDFGLER
601: LLTGETSYIR AGGSSRIFSS KRYTTSSREF SSIGPTPSPS PSSVGAMSPY CAPESFRSLK PSPKWDVYGF GVILLELLTG KIVSVEEIVL GNGLTVEDGH
701: RAVRMADVAI RGELDGKQEF LLDCFKLGYS CASPVPQKRP TMKESLAVLE RFHPNSSVIK SSSFHYGH

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:UniProtKB/Swiss-Prot;Acc:C0LGS3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.