Factsheet for Bra039836.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 8
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra035381.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G15300.1	Bra035381.1-P	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54466	Canola	plasma membrane	98.47	98.33
AT2G15300.1	Thale cress	plasma membrane	76.01	73.25
Bra011508.1-P	Field mustard	plasma membrane	66.53	63.94
Zm00001d008868_P001	Maize	endoplasmic reticulum, extracellular, plastid	5.58	57.14
Zm00001d045902_P001	Maize	cytosol	8.09	51.79
PGSC0003DMT400066550	Potato	endoplasmic reticulum, plasma membrane	20.92	49.51
VIT_03s0180g00150.t01	Wine grape	plasma membrane	51.05	48.41
KRH33257	Soybean	cytosol, golgi, plasma membrane	20.5	48.2
KRG91028	Soybean	plasma membrane	51.33	47.48
GSMUA_Achr4P12930_001	Banana	plasma membrane, vacuole	37.94	47.22
KRH35733	Soybean	plasma membrane	50.91	46.79
GSMUA_Achr8P25210_001	Banana	plasma membrane	44.07	46.2
Solyc01g107650.2.1	Tomato	plasma membrane	48.67	45.27
GSMUA_Achr9P22590_001	Banana	plasma membrane	40.03	43.48
GSMUA_Achr3P28250_001	Banana	mitochondrion	34.87	43.03
Bra012148.1-P	Field mustard	plasma membrane	42.96	41.68
Bra011747.1-P	Field mustard	plasma membrane	44.21	41.66
GSMUA_Achr4P09420_001	Banana	plasma membrane	39.33	41.29
Bra032175.1-P	Field mustard	plasma membrane	42.82	40.08
Os09t0110100-01	Rice	plasma membrane	40.73	36.78
Zm00001d005298_P001	Maize	mitochondrion, plasma membrane	41.98	36.31
EER90087	Sorghum	plasma membrane	43.79	36.22
TraesCS5B01G158000.1	Wheat	plasma membrane	40.86	36.08
Zm00001d019701_P001	Maize	plasma membrane	41.56	36.08
TraesCS5D01G165400.1	Wheat	plasma membrane	40.73	35.96
EER98554	Sorghum	plasma membrane	42.26	35.9
TraesCS5A01G160500.1	Wheat	plasma membrane	40.73	35.87
Zm00001d046626_P001	Maize	plasma membrane	41.7	35.47
Os06t0638500-00	Rice	plasma membrane	42.54	34.82
Bra024761.1-P	Field mustard	plasma membrane	33.47	34.48
Bra004229.1-P	Field mustard	plasma membrane	34.31	34.36
Bra024897.1-P	Field mustard	plasma membrane	33.89	34.23
Bra016885.1-P	Field mustard	plastid	29.71	34.08
TraesCS7D01G512900.1	Wheat	plasma membrane	41.28	34.02
TraesCS7A01G523900.1	Wheat	plasma membrane	40.86	33.64
TraesCS7B01G441200.1	Wheat	plasma membrane	41.14	33.6
HORVU7Hr1G116470.2	Barley	plasma membrane	40.86	33.49
Bra004191.1-P	Field mustard	cytosol, nucleus, plasma membrane	30.54	32.74
Bra007361.1-P	Field mustard	cytosol	14.92	32.62

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra039836	EnsemblPlants:Bra039836.1
EnsemblPlants:Bra039836.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_4	UniProt:M4FFG2	PFAM:PF00069	PFAM:PF00560
PFAM:PF08263	PFAM:PF12799	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27008	PANTHER:PTHR27008:SF42
InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000253EB17
SEG:seg	:	:	:	:	:

Description

AT2G15300 (E=1e-211) | leucine-rich repeat transmembrane protein kinase, putative

Coordinates

chrScaffold000178:+:154840..157659

Molecular Weight (calculated)

78782.4 Da

IEP (calculated)

7.783

GRAVY (calculated)

-0.163

Length

717 amino acids

Sequence
(BLAST)

001: MTSHRRNLSN HFIFHLLLLL LPTLLQALNT DGVLLLSFKY TITSDPLSVL RNWNYDDETP CSWTGVTCTE LGSPNTPDMS RVTTLALPNK QLLGSVSPSL
101: FSIPNLRILD LSNNFFHGSL PDSLSNATQL RVLSLGNNNV SGQLPESITS VATLQLLNLS ANAFTGKIPQ DLPLLKNLTV LDLSSNHLDG SLPQDLQGTS
201: LHYLNLSHNQ ISGDISPTFA QKVPPTIILD ISFNNLTGPI PSTPPMLNQR AESFLGNLGL CGQPLKTPCS IPSTLSDPQN ISDTTSPAIA VMPRSSSPPT
301: NPSPDSPPNQ SKLKPTTIVG ITVADIAGLA IIAMIILYVY QLRKRRSYQE YSTFKVLKDC LEKNDTLSIK KELKQSVFAL EVTKSPAAKP RWSSCLTGRY
401: DETSSESDVE NQKTVEALKR SGETQLVTVD GETKLELETL LKASAYVLGT SRGGIVYKAV LENGAAFAVR RIGAESCTAV KLKEFEREVQ GIAKLRHPNL
501: VRVRGFVWGR EEKLLISDYV PNGSLHCSSI YSKSGSSSTS SPNPLSFKAR VKIARGIARG IAYIHDKKHV HGNIKPNNIL FDSEFEPIIT DTGLDRLMTP
601: AHSLIAGPAS GSHHHPPEWS TSEKPNPRWD VYSFGVIFLE LLMGRVFLVD RDFVRESEVD EKTWFLRLVD GTINSDLAYH EDEVVACFRL TYGCVSSLPQ
701: KRPSMKEVVQ VLEKISV

Best Arabidopsis Sequence Match ( AT2G15300.1 )
(BLAST)

001: MTSNRSNLFL HLLLLHLPTL IQALNTDGVA LLSFKYSILN DPLLVLRNWN YDDETPCSWT GVTCTELGIP NTPDMFRVTS LVLPNKQLLG SVSPDLFSIL
101: HLRILDLSDN FFHGSLPDSV SNASELRILS LGNNKVSGEL PRSISNVASL QLLNLSANAL TGKIPPNLSL PKNLTVISLA KNSFSGDIPS GFEAVQVLDI
201: SSNLLDGSLP PDFRGTSLLY LNLSNNQISG MISPPFAEKF PASAIIDLSF NNLTGPIPNT PPLLNQKTES FSGNIGLCGQ PLKTLCSIPS TLSDPPNISE
301: TTSPAIAVMP TTPTPTNSST ESTNQTAKSK LKPSTIIGIT LADIAGLAII AMFILYIYQL KKRRSYQEYS TFNVLQKCLE KNDTLSVKKS KHNVADALEF
401: TKSPPAKMGC GSWISRRYEE TTSVSSESDI ENQKPVEAFD RTGGGRVKHN TETQLVTVDG ETQLELDTLL KASAYVLGTN RSDGIVYKAV LENGAAFAVR
501: RIGAESCPAA KFKEFEKEVQ GIAKLRHPNL VRVRGFVWGK EEKLLISDYV PNGNLPLSSI SAKSSSFSHK PLSFEARLKL ARGIARGIAY IHDKKHVHGN
601: IKANNILLDS EFEPVITDMG LDRIMTSAHL LTDGPLSSLQ DQPPEWSTSQ KPNPKWDVYS FGVILLELLT GIVFSVDRDL VRDSETDEKS WFLKLVDGEI
701: RVEVAHREDE AVACLKLGYE CVSSLPQKRP SMKEVVQVLE KMFV

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SHU6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.