Factsheet for Bra016885.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47962	Canola	plasma membrane	97.6	94.57
AT2G42290.1	Thale cress	plasma membrane	83.04	80.34
Bra007361.1-P	Field mustard	cytosol	37.6	71.65
VIT_08s0007g07820.t01	Wine grape	plasma membrane	61.6	60.16
KRG95336	Soybean	extracellular, plasma membrane, vacuole	59.52	57.14
KRH67019	Soybean	vacuole	59.04	57.03
PGSC0003DMT400033662	Potato	plasma membrane	56.8	56.62
Solyc03g064010.2.1	Tomato	plasma membrane	56.32	56.05
KRH71886	Soybean	plasma membrane	52.8	51.24
GSMUA_Achr3P11100_001	Banana	plasma membrane	41.92	45.09
TraesCS7A01G245400.1	Wheat	plasma membrane	46.4	44.68
TraesCS7B01G146100.1	Wheat	plasma membrane	46.24	44.53
TraesCS7D01G244000.1	Wheat	plasma membrane	46.08	44.38
GSMUA_Achr6P03450_001	Banana	plastid	43.04	43.74
Os08t0506400-01	Rice	plasma membrane	45.92	43.68
Zm00001d031437_P001	Maize	plasma membrane	46.24	43.66
KXG25642	Sorghum	plasma membrane	46.4	43.48
Bra004229.1-P	Field mustard	plasma membrane	45.92	40.08
Bra024761.1-P	Field mustard	plasma membrane	40.16	36.06
Bra024897.1-P	Field mustard	plasma membrane	37.76	33.24
Bra004191.1-P	Field mustard	cytosol, nucleus, plasma membrane	35.36	33.03
Bra039836.1-P	Field mustard	plasma membrane	34.08	29.71
Bra011508.1-P	Field mustard	plasma membrane	35.04	29.36
Bra012148.1-P	Field mustard	plasma membrane	33.6	28.42
Bra011747.1-P	Field mustard	plasma membrane	34.4	28.25
Bra032175.1-P	Field mustard	plasma membrane	33.76	27.55

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra016885	EnsemblPlants:Bra016885.1
EnsemblPlants:Bra016885.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M4DK57	PFAM:PF07714	PFAM:PF08263	PFAM:PF13855
PRINTS:PR00019	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF41	InterPro:Prot_kinase_dom	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI00025438DD	SEG:seg	:	:

Description

AT2G42290 (E=3e-256) | leucine-rich repeat family protein

Coordinates

chrA04:-:17752589..17755096

Molecular Weight (calculated)

68484.4 Da

IEP (calculated)

6.869

GRAVY (calculated)

-0.271

Length

625 amino acids

Sequence
(BLAST)

001: MTLCSSLNSD GLSLLALKSA VDNDPTKVMN HWSESDQTPC HWSGVACTNG RVTSLNLFGK SLSGYIPSEL GLLDSLNRLD LAHNNFSKPV PVRLFEPTNL
101: RYIDLSHNSL SGPIPDQIRH LKSLNHLDLS SNRLNGSLPE SLAELGSLAG TLNLSFNRFA GEIPPSYGRL PLHVTLDLSH NNLTGKVPQV GSLLNQGPFA
201: FAGNSHLCGF PLQTPCEDFE IPNLIAAKPE STQELQKPNP SVISKEEGKE KQTTGSVTVS LISGVSVVIG AVSLSVWLIR RKQSSDKTDP KTVVSEFDEE
301: GQDGKFVAFG EGFELDLEDL LRASAYVLGK SRSGIVYRVV AAEAEPSSSS SAAVVAVRRL SEGNATWRFK EFENEVENIG RVSHPNIVRL RAYYYAEDEK
401: LLITDYISNG SLYSALHGGP PNTRPLLSWA ERLHIAQGTA RGLMYIHEYS SRKYIHGNLK SSKVLLDDEL LPHISGFGLT RLVQGYPKLP DHSLSTNVQS
501: FATRLSAPPQ AAYLAPEARA SSRYKSSQKC DVYSFGVILL ELLTGRLPDG SSENEGEELV SVVRKWHKEG RSLAEILDPK LLNQELTDKQ VIAAIRVALN
601: CTNMDPEMRP RMRSVSESLG RIKTV

Best Arabidopsis Sequence Match ( AT2G42290.1 )
(BLAST)

001: MKLPSILSLV VSSIFLCMSF CSSLNSDGLS LLALKSAVDN DPTRVMTHWS ESDPTPCHWS GIVCTNGRVT TLVLFGKSLS GYIPSELGLL NSLNRLDLAH
101: NNFSKTIPVR LFEATKLRYI DLSHNSLSGP IPAQIKSMKS LNHLDFSSNH LNGSLPESLT ELGSLVGTLN FSFNQFTGEI PPSYGRFRVH VSLDFSHNNL
201: TGKVPQVGSL LNQGPNAFAG NSHLCGFPLQ TPCEKIKTPN FVAAKPEGTQ ELQKPNPSVI SNDDAKEKKQ QITGSVTVSL ISGVSVVIGA VSLSVWLIRR
301: KRSSDGYNSE TKTTTVVSEF DEEGQEGKFV AFDEGFELEL EDLLRASAYV IGKSRSGIVY RVVAAESSST VVAVRRLSDG NDTWRFKDFV NEVESIGRIN
401: HPNIVRLRAY YYAEDEKLLI TDFINNGSLY SALHGGPSNT RPTLSWAERL CIAQGTARGL MYIHEYSSRK YVHGNLKSSK ILLDNELHPH VSGFGLTRLV
501: SGYPKVTDHS LSSMTQSIDQ GFATRLSVSA PAAAYLAPEA RASSDCKLSH KCDVYSFGVI LLELLTGRLP YGSSENEGEE ELVNVLRKWH KEERSLAEIL
601: DPKLLKQDFA NKQVIATIHV ALNCTEMDPD MRPRMRSVSE ILGRIK

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SLD0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.