Factsheet for VIT_08s0007g07820.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 10
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033662	Potato	plasma membrane	65.0	66.35
KRH67019	Soybean	vacuole	66.88	66.15
KRG95336	Soybean	extracellular, plasma membrane, vacuole	67.19	66.05
Solyc03g064010.2.1	Tomato	plasma membrane	64.06	65.29
Bra007361.1-P	Field mustard	cytosol	33.12	64.63
CDX71990	Canola	cytosol	33.12	64.63
CDX71991	Canola	vacuole	24.22	62.5
CDY06072	Canola	plasma membrane	62.81	62.23
Bra016885.1-P	Field mustard	plastid	60.16	61.6
KRH71886	Soybean	plasma membrane	61.88	61.49
AT3G57830.1	Thale cress	plasma membrane	63.28	61.18
AT2G42290.1	Thale cress	plasma membrane	60.94	60.37
CDY47962	Canola	plasma membrane	60.62	60.16
CDY14823	Canola	plasma membrane	59.84	59.84
GSMUA_Achr3P11100_001	Banana	plasma membrane	45.94	50.6
GSMUA_Achr6P03450_001	Banana	plastid	48.12	50.08
TraesCS7D01G244000.1	Wheat	plasma membrane	49.38	48.69
TraesCS7B01G146100.1	Wheat	plasma membrane	49.22	48.54
TraesCS7A01G245400.1	Wheat	plasma membrane	49.06	48.38
Zm00001d031437_P001	Maize	plasma membrane	49.69	48.04
Os08t0506400-01	Rice	plasma membrane	49.22	47.95
KXG25642	Sorghum	plasma membrane	49.69	47.68
VIT_01s0010g02910.t01	Wine grape	plasma membrane	49.69	44.85
VIT_01s0011g04060.t01	Wine grape	plasma membrane	38.75	34.78
VIT_07s0129g01070.t01	Wine grape	plasma membrane	35.16	28.81
VIT_03s0180g00150.t01	Wine grape	plasma membrane	33.75	28.57

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100262317	wikigene:100262317	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CCB55173	ProteinID:CCB55173.1	UniProt:F6HL66	EMBL:FN595991	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100262317	wikigene:LOC100262317	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF07714	PFAM:PF08263
PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF41	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TIGR:TC53383	TMHMM:TMhelix	UniParc:UPI00015CA9E9	ArrayExpress:VIT_08s0007g07820
EnsemblPlantsGene:VIT_08s0007g07820	EnsemblPlants:VIT_08s0007g07820.t01	RefSeq:XP_002277291	RefSeq:XP_002277291.2	SEG:seg	:

Description

No Description!

Coordinates

chr8:-:21253342..21259543

Molecular Weight (calculated)

69248.1 Da

IEP (calculated)

8.971

GRAVY (calculated)

-0.108

Length

640 amino acids

Sequence
(BLAST)

001: MLLFRAELGL ASFLIFFTCL SSSLNSDGLS LLALKAAIVS DPTGVLDTWS ESDLVPCHWG GISCTHGRVT GVFLPNRSFT GYIPSELGAL VNLRQLSLAN
101: NNFSKPIPSR LFNATTLLSL DLSHNSLSGP LPTQVKALKY LVHLDLSSNL LNGSLPEELA ELENLAGSLN LSHNRFSGEV PASYGKIPLM VSLDLRHNNL
201: TGKIPQIGSL LNQGPTAFSG NPSLCGFPLQ TPCPEASNPK IFVNPENPRK PNPSFPNGAA DEGEERQKIG GGSVAVPLIS GISVVVGVVS VSVWLFRKKR
301: SSGEGKIGRE KLAKEVEDEG QKGKFVVVDE GFGLELEDLL RASAYVVGKS RSGIVYRVVA GRVSGASPTV VAVRRLSEGD GTWRLKDFES EVEAIARVHH
401: QNIVRLRAYY YANDEKLLVS DFIRNGSLHT ALHGGPSNTL PPLSWAARLK IAQGAARGLM HIHECSPRKY VHGNIKSSKI LLDDHLQPYV SGFGLTRLVS
501: GASSKKQNSH QVSTNSVLGS KASANSIAYL APEARVSGTR FTQKCDVYSF GIVLMEVLTA RLPDAGPEND GKGLESLVRK VFRDERPLSE IIDPALLHEV
601: YAKKQVLSAF HVALNCTELD PELRPRMRTV SESLDRIKSQ

Best Arabidopsis Sequence Match ( AT3G57830.1 )
(BLAST)

001: MQFLRLLTLL VSSYFFFFIN FSSSLNPDGL SLLALKSAIL RDPTRVMTSW SESDPTPCHW PGIICTHGRV TSLVLSGRRL SGYIPSKLGL LDSLIKLDLA
101: RNNFSKPVPT RLFNAVNLRY IDLSHNSISG PIPAQIQSLK NLTHIDFSSN LLNGSLPQSL TQLGSLVGTL NLSYNSFSGE IPPSYGRFPV FVSLDLGHNN
201: LTGKIPQIGS LLNQGPTAFA GNSELCGFPL QKLCKDEGTN PKLVAPKPEG SQILPKKPNP SFIDKDGRKN KPITGSVTVS LISGVSIVIG AVSISVWLIR
301: RKLSSTVSTP EKNNTAAPLD DAADEEEKEG KFVVMDEGFE LELEDLLRAS AYVVGKSRSG IVYRVVAGMG SGTVAATFTS STVVAVRRLS DGDATWRRKD
401: FENEVEAISR VQHPNIVRLR AYYYAEDERL LITDYIRNGS LYSALHGGPS NTLPSLSWPE RLLIAQGTAR GLMYIHEYSP RKYVHGNLKS TKILLDDELL
501: PRISGFGLTR LVSGYSKLIG SLSATRQSLD QTYLTSATTV TRITAPTVAY LAPEARASSG CKLSQKCDVY SFGVVLMELL TGRLPNASSK NNGEELVRVV
601: RNWVKEEKPL SEILDPEILN KGHADKQVIA AIHVALNCTE MDPEVRPRMR SVSESLGRIK SD

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.