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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 7
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400033662 Potato plasma membrane 92.99 93.14
VIT_08s0007g07820.t01 Wine grape plasma membrane 65.29 64.06
KRH67019 Soybean vacuole 61.78 59.97
Bra007361.1-P Field mustard cytosol 31.05 59.45
KRG95336 Soybean extracellular, plasma membrane, vacuole 61.62 59.45
CDX71990 Canola cytosol 30.89 59.15
CDX71991 Canola vacuole 22.61 57.26
Bra016885.1-P Field mustard plastid 56.05 56.32
KRH71886 Soybean plasma membrane 57.17 55.75
CDY06072 Canola plasma membrane 57.32 55.73
AT3G57830.1 Thale cress plasma membrane 58.6 55.59
CDY47962 Canola plasma membrane 56.21 54.73
CDY14823 Canola plasma membrane 55.41 54.38
AT2G42290.1 Thale cress plasma membrane 55.89 54.33
GSMUA_Achr3P11100_001 Banana plasma membrane 43.79 47.33
GSMUA_Achr6P03450_001 Banana plastid 45.22 46.18
Os08t0506400-01 Rice plasma membrane 46.97 44.9
Zm00001d031437_P001 Maize plasma membrane 47.29 44.86
KXG25642 Sorghum plasma membrane 47.61 44.83
TraesCS7D01G244000.1 Wheat plasma membrane 45.86 44.38
TraesCS7A01G245400.1 Wheat plasma membrane 45.7 44.22
TraesCS7B01G146100.1 Wheat plasma membrane 45.7 44.22
Solyc05g015150.2.1 Tomato plasma membrane 46.02 40.31
Solyc05g008860.2.1 Tomato extracellular 38.22 33.57
Solyc01g107650.2.1 Tomato plasma membrane 34.87 28.4
Solyc02g092940.2.1 Tomato plasma membrane 33.76 27.6
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611
InterPro:IPR032675UniProt:K4BHD6InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
PFAM:PF00560PFAM:PF07714PFAM:PF08263PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF41
InterPro:Prot_kinase_domSUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domSignalP:SignalP-TMEnsemblPlantsGene:Solyc03g064010.2
EnsemblPlants:Solyc03g064010.2.1TMHMM:TMhelixUniParc:UPI00027679DFSEG:seg::
Description
No Description!
Coordinates
chr3:+:37218181..37222122
Molecular Weight (calculated)
68572.5 Da
IEP (calculated)
7.598
GRAVY (calculated)
-0.048
Length
628 amino acids
Sequence
(BLAST)
001: MNVVVIVILS FVTFSISAIF SLNSDGVSLL ALKSAISNDP SHFLSSWSEL DSSACHWNGI TCDENDKVIS ISLSSKNLSG YIPSEIGALS SLSILTLSYN
101: NFSKPIPIHL FNATSLHFLD LSNNAFTGFL PQEITSLVNL KHLDISANFL NGSLPQDLTH LTLLTGTLNL SYNRFSGQVP ATYGKFPVTL SLDLRHNNLT
201: GKIPSVGSLL NQGPTAFSGN PFLCGFPLET PCAEPEAQKP PPNPNPNEEE VGFVGKGKSG NGSVVVSLIS GVSVVIGVMF VSVWVLRRKW KLDEGKMGKE
301: KLEKAEEGQK GKYVVLDEGF GMELEDLLRA SAYVVGKSRN GIVYKVVAGG GTVVAVRRLS EGDVTWKLKE FEMEVEAIGR VQHPNLVRLR AYYYASDEKL
401: LVTDFIRNST LHNALHGGLG NSLPPLSWAA RLKIAQGTAR GLMHIHECNP RKYVHGNINS TKILLDDDLQ AYISGFGLTR LVLGCSKPIN SSTKKLSTSQ
501: IIVSPQNSTS SCTMYMAPED RVPGSKFTQK SDIYSFGMVL LEILTGRLAN GGSEVEDDGK GLESLVRKVF RQERPLSEII DPALLNEVHA KKQVVAAFYI
601: ALNCTELDPE LRPRMRTVSD NLDRIRLQ
Best Arabidopsis Sequence Match ( AT3G57830.1 )
(BLAST)
001: MQFLRLLTLL VSSYFFFFIN FSSSLNPDGL SLLALKSAIL RDPTRVMTSW SESDPTPCHW PGIICTHGRV TSLVLSGRRL SGYIPSKLGL LDSLIKLDLA
101: RNNFSKPVPT RLFNAVNLRY IDLSHNSISG PIPAQIQSLK NLTHIDFSSN LLNGSLPQSL TQLGSLVGTL NLSYNSFSGE IPPSYGRFPV FVSLDLGHNN
201: LTGKIPQIGS LLNQGPTAFA GNSELCGFPL QKLCKDEGTN PKLVAPKPEG SQILPKKPNP SFIDKDGRKN KPITGSVTVS LISGVSIVIG AVSISVWLIR
301: RKLSSTVSTP EKNNTAAPLD DAADEEEKEG KFVVMDEGFE LELEDLLRAS AYVVGKSRSG IVYRVVAGMG SGTVAATFTS STVVAVRRLS DGDATWRRKD
401: FENEVEAISR VQHPNIVRLR AYYYAEDERL LITDYIRNGS LYSALHGGPS NTLPSLSWPE RLLIAQGTAR GLMYIHEYSP RKYVHGNLKS TKILLDDELL
501: PRISGFGLTR LVSGYSKLIG SLSATRQSLD QTYLTSATTV TRITAPTVAY LAPEARASSG CKLSQKCDVY SFGVVLMELL TGRLPNASSK NNGEELVRVV
601: RNWVKEEKPL SEILDPEILN KGHADKQVIA AIHVALNCTE MDPEVRPRMR SVSESLGRIK SD
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.