Factsheet for GSMUA_Achr4P12930_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P22740_001
GSMUA_Achr4P17470_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G15300.1	GSMUA_Achr1P22740_001	AT5G35750.1	18642946
AT2G15300.1	GSMUA_Achr4P17470_001	AT5G35750.1	18642946
AT2G15300.1	GSMUA_AchrUn_...	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008868_P001	Maize	endoplasmic reticulum, extracellular, plastid	8.85	72.86
Zm00001d045902_P001	Maize	cytosol	12.85	66.07
GSMUA_Achr9P22590_001	Banana	plasma membrane	71.88	62.73
GSMUA_Achr8P25210_001	Banana	plasma membrane	68.4	57.6
GSMUA_Achr3P28250_001	Banana	mitochondrion	56.42	55.94
GSMUA_Achr4P09420_001	Banana	plasma membrane	58.68	49.49
VIT_03s0180g00150.t01	Wine grape	plasma membrane	56.6	43.12
VIT_07s0129g01070.t01	Wine grape	plasma membrane	57.81	42.64
PGSC0003DMT400066225	Potato	plasma membrane	56.94	42.54
Solyc01g107650.2.1	Tomato	plasma membrane	56.25	42.02
CDX89556	Canola	plasma membrane	55.21	41.57
EER90087	Sorghum	plasma membrane	62.33	41.41
KRH04528	Soybean	plasma membrane	54.69	41.39
CDY38934	Canola	plasma membrane	55.03	41.38
KRG91028	Soybean	plasma membrane	55.38	41.16
Bra032175.1-P	Field mustard	plasma membrane	54.69	41.12
Os06t0638500-00	Rice	plasma membrane	62.5	41.1
KRH57974	Soybean	plasma membrane	54.86	41.04
AT4G37250.1	Thale cress	plasma membrane	54.69	41.02
Bra012148.1-P	Field mustard	plasma membrane	52.6	41.0
CDX69286	Canola	plasma membrane	53.12	40.58
KRH35733	Soybean	plasma membrane	54.86	40.51
Bra011747.1-P	Field mustard	plasma membrane	53.12	40.21
CDX75634	Canola	plasma membrane	52.95	40.18
AT5G67280.1	Thale cress	plasma membrane	52.26	40.08
AT2G23300.1	Thale cress	plasma membrane	53.65	39.97
CDY69287	Canola	mitochondrion	24.13	39.94
TraesCS7B01G441200.1	Wheat	plasma membrane	60.76	39.86
TraesCS7A01G523900.1	Wheat	plasma membrane	60.24	39.84
HORVU7Hr1G116470.2	Barley	plasma membrane	60.42	39.77
TraesCS7D01G512900.1	Wheat	plasma membrane	60.07	39.77
CDX69035	Canola	plasma membrane	51.56	39.76
Zm00001d046626_P001	Maize	plasma membrane	58.16	39.74
Solyc02g092940.2.1	Tomato	plasma membrane	52.95	39.71
Bra011508.1-P	Field mustard	plasma membrane	51.39	39.68
CDX75411	Canola	plasma membrane	51.39	39.68
Os09t0110100-01	Rice	plasma membrane	54.69	39.67
PGSC0003DMT400064235	Potato	plasma membrane	52.78	39.58
GSMUA_Achr3P21080_001	Banana	plasma membrane	36.98	39.3
PGSC0003DMT400066550	Potato	endoplasmic reticulum, plasma membrane	20.49	38.94
AT4G34220.1	Thale cress	plasma membrane	51.04	38.84
TraesCS5D01G165400.1	Wheat	plasma membrane	54.51	38.67
TraesCS5A01G160500.1	Wheat	plasma membrane	54.51	38.57
TraesCS5B01G158000.1	Wheat	plasma membrane	54.34	38.55
AT2G15300.1	Thale cress	plasma membrane	49.48	38.31
GSMUA_Achr8P18330_001	Banana	plasma membrane	35.59	38.25
EER98554	Sorghum	plasma membrane	55.73	38.03
Bra039836.1-P	Field mustard	plasma membrane	47.22	37.94
Zm00001d005298_P001	Maize	mitochondrion, plasma membrane	54.17	37.64
CDY54466	Canola	plasma membrane	46.88	37.6
Zm00001d019701_P001	Maize	plasma membrane	53.82	37.53
CDY52422	Canola	plasma membrane	46.88	37.5
GSMUA_Achr9P21500_001	Banana	plasma membrane	39.58	36.95
GSMUA_Achr3P29400_001	Banana	plasma membrane	37.15	36.09
KRH33257	Soybean	cytosol, golgi, plasma membrane	18.23	34.43
GSMUA_Achr4P06720_001	Banana	plasma membrane	35.59	34.0
GSMUA_Achr1P13440_001	Banana	plasma membrane	32.29	32.63
GSMUA_Achr3P11100_001	Banana	plasma membrane	31.94	31.67
GSMUA_Achr6P03450_001	Banana	plastid	32.12	30.08
CDY01423	Canola	plasma membrane	52.95	28.69
CDY12827	Canola	plasma membrane	52.08	28.22
GSMUA_Achr6P28540_001	Banana	vacuole	29.69	26.35

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G12930_001	EnsemblPlants:GSMUA_Achr4P12930_001
EnsemblPlants:GSMUA_Achr4T12930_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0SNF8	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF35	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000295230C	SEG:seg	:	:

Description

Putative Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:GMGC_GENE;Acc:GSMUA_Achr4G12930_001]

Coordinates

chr4:+:9633068..9635528

Molecular Weight (calculated)

61472.1 Da

IEP (calculated)

7.921

GRAVY (calculated)

0.035

Length

576 amino acids

Sequence
(BLAST)

001: MSSKWVITTT HAALLCSILL LLGPALGLNQ DGALLLRFKY SVLSDPLAAL RDWNYDDATP CSWNGVLGFI EHLRHLDLSG NDLNGTLPAS IFNASELRVL
101: SLAANEISGG LPQLDGRTSS LLVLNLSDNA LAGAVPTGLA LLPNLTVLAL TNNYLSDELP SGGAVVDLAF NNLTGGIPRS GALASQKPAA FAGNPGLCGK
201: PLKNLCTIPS NLSGPPNTST EAPGQQQGGL RPAVITTIVV GDVAGIGLLC LVLWYVYQVK KRNRGGEEDT EETSASSAPT FVTVDSGSEL ELETLLKASA
301: YVLGASGSSI VYKAVLADGT ALAVRRIGES GTLHKMKDFE VLVRSIAKFR HPNLVRLRGF YWAADEKLLI HDYVPNGSLA NISFTKKHGS SPFHLSWESR
401: LRIARGVARG LAYLHEKKSM HGNIKPSNIL LEADMEPKIG DFGLERLTSA GGGYRLSTSA RLFGSKRSAP ESMKNLKPSS KWDVYSFGVL LLELLAGRAL
501: SEVELGQCNA GFVVEERNRV VRMADPALRG EVEEQQEALL SCFKLGFACC AAAPQRRPSM KDAIQVLEKL PPSASC

Best Arabidopsis Sequence Match ( AT4G37250.1 )
(BLAST)

001: MRMELISVIF FFFCSVLSSS ALNSDGLVLM KFKSSVLVDP LSLLQTWNYK HESPCSWRGI SCNNDSKVLT LSLPNSQLLG SIPSDLGSLL TLQSLDLSNN
101: SFNGPLPVSF FNARELRFLD LSSNMISGEI PSAIGDLHNL LTLNLSDNAL AGKLPTNLAS LRNLTVVSLE NNYFSGEIPG GWRVVEFLDL SSNLINGSLP
201: PDFGGYSLQY LNVSFNQISG EIPPEIGVNF PRNVTVDLSF NNLTGPIPDS PVFLNQESNF FSGNPGLCGE PTRNPCLIPS SPSIVSEADV PTSTPAIAAI
301: PNTIGSNPVT DPNSQQTDPN PRTGLRPGVI IGIVVGDIAG IGILAVIFLY IYRCKKNKIV DNNNNDKQRT ETDTITLSTF SSSSSSPEES RRFRKWSCLR
401: KDPETTPSEE EDEDDEDEES GYNANQRSGD NKLVTVDGEK EMEIETLLKA SAYILGATGS SIMYKAVLED GRVFAVRRLG ENGLSQRRFK DFEPHIRAIG
501: KLVHPNLVRL CGFYWGTDEK LVIYDFVPNG SLVNPRYRKG GGSSSPYHLP WETRLKIAKG IARGLAYLHE KKHVHGNLKP SNILLGHDME PKIGDFGLER
601: LLTGETSYIR AGGSSRIFSS KRYTTSSREF SSIGPTPSPS PSSVGAMSPY CAPESFRSLK PSPKWDVYGF GVILLELLTG KIVSVEEIVL GNGLTVEDGH
701: RAVRMADVAI RGELDGKQEF LLDCFKLGYS CASPVPQKRP TMKESLAVLE RFHPNSSVIK SSSFHYGH

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:UniProtKB/Swiss-Prot;Acc:C0LGS3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.