CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52887	Canola	plasma membrane	95.67	54.73
CDX71991	Canola	vacuole	23.66	37.5
CDX84980	Canola	plasma membrane	44.53	25.04
CDX77808	Canola	plasma membrane	44.78	24.96
CDY42116	Canola	plasma membrane	43.77	24.71
CDY17688	Canola	plasma membrane	46.31	23.39
CDY01814	Canola	plasma membrane	36.39	19.86
CDX96089	Canola	plasma membrane	35.37	19.41
CDX75411	Canola	plasma membrane	34.86	18.36
CDX69035	Canola	plasma membrane	34.86	18.34
GSMUA_Achr3P11100_001	Banana	plasma membrane	26.72	18.07
CDY47962	Canola	plasma membrane	27.74	16.9
CDY14823	Canola	plasma membrane	27.48	16.88
CDX69286	Canola	plasma membrane	32.32	16.84
CDX75634	Canola	plasma membrane	31.81	16.47
CDY06072	Canola	plasma membrane	26.97	16.41
CDX89556	Canola	plasma membrane	31.81	16.34
CDY38934	Canola	plasma membrane	31.81	16.32
GSMUA_Achr6P03450_001	Banana	plastid	25.19	16.1
CDY52422	Canola	plasma membrane	29.26	15.97
CDY54466	Canola	plasma membrane	29.01	15.88
TraesCS7D01G244000.1	Wheat	plasma membrane	26.21	15.87
TraesCS7B01G146100.1	Wheat	plasma membrane	26.21	15.87
TraesCS7A01G245400.1	Wheat	plasma membrane	26.21	15.87
Zm00001d031437_P001	Maize	plasma membrane	26.46	15.71
KXG25642	Sorghum	plasma membrane	26.46	15.59
Os08t0506400-01	Rice	plasma membrane	25.7	15.37
CDY01423	Canola	plasma membrane	29.52	10.91
CDY12827	Canola	plasma membrane	29.52	10.91
CDY69287	Canola	mitochondrion	3.56	4.02
CDX96124	Canola	cytosol	0.51	1.6
CDX71990	Canola	cytosol	1.27	1.52

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:A0A078E9T4	EnsemblPlants:CDX96123	ProteinID:CDX96123	ProteinID:CDX96123.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00102176001	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF08263	PFAM:PF13855
PFscan:PS51450	PANTHER:PTHR27008	PANTHER:PTHR27008:SF11	SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0004EEEEA2	SEG:seg	:	:	:

Description

BnaA07g26080D

Coordinates

chrLK031892:+:1179030..1181079

Molecular Weight (calculated)

42950.8 Da

IEP (calculated)

8.710

GRAVY (calculated)

0.003

Length

393 amino acids

Sequence
(BLAST)

001: MAQLFLILCF FLTLFISMAT SLNDQGLALL SFKQALLNQK DYSVLTTWNS SDSNPCFWLG IACDKDLRVV SIRLPNKNLS GSLHPSIGTL LSLRHINLRD
101: NEFQGKLPVE LFAPIGLQSL VLSGNSFSGF VPEEIGRLKS LITLDLSKNS FNGSIPLSLL QCKKLKTLVL SNNNFSGDLP TRFGSSLVQL RTLNLSFNRL
201: SGTIPEDISN LKNLKGTLDL SHNSLSGMIP TSLGDLPEVL YVDLSHNNLS GPIPQSNVLL NAGPNAFQGN PLLCGIPTKV SCATRNTQII PSQLYTQKAN
301: HHSRFCTILT ATGCTVAGII FLVSLLIYHL RKASAARADK DHQNNRTSHS EKNTMQEFLC FKGNSASEAL DENKTQQVDQ VACHASNFLG RFG

Best Arabidopsis Sequence Match ( AT1G25320.1 )
(BLAST)

001: MSVGSLLFMF LLIWNFNGEL NALNDEGFAL LTLKQSISKD PDGSLSNWNS ENQNPCSWNG VTCDDNKVVV SLSIPKKKLL GYLPSSLGLL SNLRHLNLRS
101: NELSGNLPVE LFKAQGLQSL VLYGNFLSGS IPNEIGDLKF LQILDLSRNS LNGSIPESVL KCNRLRSFDL SQNNLTGSVP SGFGQSLASL QKLDLSSNNL
201: IGLVPDDLGN LTRLQGTLDL SHNSFSGSIP ASLGNLPEKV YVNLAYNNLS GPIPQTGALV NRGPTAFLGN PRLCGPPLKD PCLPDTDSSS TSHPFVPDNN
301: EQGGGGSKKG EGLSKTAIVA IVVCDFIGIC IVGFLFSCCY LKICARRNSV DEEGYVLEKE GKEKKGSFCF RRDGSESPSS ENLEPQQDLV LLDKHIALDL
401: DELLKASAFV LGKGGNGIVY KVVLEDGLTV AVRRLGEGGS QRCKEFQTEV EAIGKLRHPN IVSLKAYYWS VEEKLLIYDY IPNGSLTNAL HGNPGMVSFK
501: PLSWGVRLKI MRGISRGLVY LHEFSPKKYV HGSLKLSNIL LGQDMEPHIS DFGLMHLSSI AGTLESTTVD RPSNKTASSI GSSANLSSFY LAPEATKATV
601: KPSQKWDVYS FGVILLEMIT GRLPIVFVGK SEMEIVKWIQ MCIDEKKEMS DILDPYLVPN DTEIEEEVIA VLKIAMACVS TSPEKRPPMK HIADALTQIC
701: LQ

Arabidopsis Description

At1g25320/F4F7_17 [Source:UniProtKB/TrEMBL;Acc:Q9FRI1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.