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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH10835 Soybean nucleus 92.71 92.9
Zm00001d029743_P001 Maize cytosol 9.38 78.26
KRH50009 Soybean nucleus 76.25 76.57
KRH20483 Soybean nucleus 75.62 75.62
GSMUA_Achr11P... Banana cytosol 2.92 71.79
PGSC0003DMT400057635 Potato nucleus 57.92 63.11
Solyc02g078550.2.1 Tomato nucleus 62.19 62.58
VIT_00s0370g00040.t01 Wine grape cytosol, nucleus 51.15 62.31
AT4G21670.1 Thale cress nucleus 57.92 57.5
Bra020905.1-P Field mustard cytosol 50.1 56.79
CDX94046 Canola nucleus 56.25 56.78
CDX76438 Canola cytosol 49.58 56.2
Bra038764.1-P Field mustard nucleus 55.31 56.07
CDY31421 Canola cytosol 48.85 55.97
CDX98696 Canola nucleus 54.17 55.79
GSMUA_Achr11P... Banana nucleus 53.23 55.12
GSMUA_Achr8P14120_001 Banana nucleus 54.17 54.79
CDX79083 Canola nucleus 48.44 54.13
HORVU6Hr1G060230.12 Barley nucleus 51.67 53.22
GSMUA_Achr11P... Banana extracellular 10.1 53.01
EES05486 Sorghum cytosol 51.56 53.0
Os02t0639000-01 Rice cytosol 51.46 52.55
TraesCS6D01G218000.3 Wheat nucleus 51.35 52.34
TraesCS6A01G235300.4 Wheat nucleus 51.25 52.28
TraesCS6B01G264000.3 Wheat nucleus 51.25 52.23
TraesCS2A01G373400.3 Wheat nucleus 51.04 51.69
HORVU2Hr1G091030.9 Barley endoplasmic reticulum, vacuole 47.71 51.4
Os04t0529500-02 Rice extracellular 49.79 51.23
Bra013546.1-P Field mustard nucleus 46.77 51.14
KXG26770 Sorghum nucleus 49.9 50.85
Zm00001d017373_P001 Maize nucleus 50.62 50.52
TraesCS2D01G369600.4 Wheat nucleus 49.69 50.32
TraesCS2B01G390500.3 Wheat nucleus 49.69 50.26
Zm00001d051242_P002 Maize cytosol, nucleus, plastid 48.75 49.95
KRH49327 Soybean nucleus 38.54 44.1
KRH00194 Soybean nucleus 38.23 43.53
Protein Annotations
EntrezGene:100814542MapMan:15.3.2.2MapMan:18.4.25.1.5Gene3D:3.30.160.20UniProt:A0A0R0H1R6EMBL:ACUP02008356
InterPro:FCP1_domEnsemblPlantsGene:GLYMA_13G241400GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003824
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005654
GO:GO:0006139GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0008420GO:GO:0009058
GO:GO:0009987GO:GO:0016591GO:GO:0016787GO:GO:0019538GO:GO:0070940InterPro:HAD-like_sf
InterPro:IPR004274InterPro:IPR014720EnsemblPlants:KRH21480ProteinID:KRH21480ProteinID:KRH21480.1ProteinID:KRH21481.1
PFAM:PF03031PFscan:PS50137PFscan:PS50969PANTHER:PTHR23081PANTHER:PTHR23081:SF17SMART:SM00358
SMART:SM00577SUPFAM:SSF54768SUPFAM:SSF56784UniParc:UPI000233AF65InterPro:dsRBD_domSEG:seg
Description
hypothetical protein
Coordinates
chr13:-:35136960..35145802
Molecular Weight (calculated)
107200.0 Da
IEP (calculated)
6.862
GRAVY (calculated)
-0.421
Length
960 amino acids
Sequence
(BLAST)
001: MPTSMVYHGE MAVGEVKIYP EENKNMDLKE IRISHFSQPS ERCPPLAVLH TITSFGICFK MESSTSQKRQ QQDALFHLHS SCIRENKTAV MPVRGEEIHL
101: VAMYSRNNDR PCFWGFIVAS GLYNSCLTML NLRCLGIVFD LDETLVVANT MRSFEDKIEV LHRKMNSEVN PQQISAMQAE IKRYLDDKNI LKEYAENDQV
201: VDNGKVIKIQ SESVPALSDS HQPIVRPLIR LQEKNIILTR INPQIRDTSV LVRLRPAWED LRSYLTARGR KRFEVFVCTM AERDYALEMW RLLDPELNLI
301: NSKELLDRIV CVKSGLKKSL FNVFQNGLCH LKMALVIDDR LKVWDEKDQP RVHVVPAFAP YYTPQAEASN AVPFLCLARN VACNVRGGFF KDFDDGLLQK
401: IPLIAYEDDI KDIPSPDVSN YLVSEDDASA SNGNKNLLLF DGMADAEVER RLKDAISASS TILALTANID PRLAFTSSLQ YTMVSSSGTV PPPTAQASVV
501: QFGNVQFPQP NTLVKPMSQV THPGLSLHSS PAREEGELPE SELDLDTRRR FLILQHGQDT RERMASEPPF PVRHPAQVSA PASSVPSRRG WFSVEEEMGP
601: QQLNLPVPKE FPVDSEPFHI EKRWPRHPSF FSKVGDSISS DRVFHESHQR LPKEVHHRDD RSRLSQSLSS YHSLPGDDIP LSGSSYSNRD FDSESGRSLF
701: HADTTAGVLQ EIALNCGTKV EFLSSLVAST ELQFSIEAWF AGKKIGEGFG RTRREAQSKA AGCSIKQLAD IYMSHAKDDS GSTYGDVSGF HGSNNDGFVS
801: SGNSLGNQLL PKEESGSFST ASESSRVSDS RLEVSKRSTD SISALKELCM MEGLAASFQS PPASASTHLT QKDEVHAQVE IDGQIFGKGF GVTWEEAKMQ
901: AAKKALGSLR TMFNQGSLKR HGSPRSMQGL ANKRLKPEYP PTLQRVPYSA RYPRNAPLVP
Best Arabidopsis Sequence Match ( AT4G21670.1 )
(BLAST)
001: MYSNNRVEVF HGDGRLGELE IYPSRELNQQ QDDVMKQRKK KQREVMELAK MGIRISHFSQ SGERCPPLAI LTTISSCGLC FKLEASPSPA QESLSLFYSS
101: CLRDNKTAVM LLGGEELHLV AMYSENIKND RPCFWAFSVA PGIYDSCLVM LNLRCLGIVF DLDETLVVAN TMRSFEDKID GFQRRINNEM DPQRLAVIVA
201: EMKRYQDDKN LLKQYIESDQ VVENGEVIKV QSEIVPALSD NHQPLVRPLI RLQEKNIILT RINPMIRDTS VLVRMRPSWE ELRSYLTAKG RKRFEVYVCT
301: MAERDYALEM WRLLDPEGNL INTNDLLARI VCVKSGFKKS LFNVFLDGTC HPKMALVIDD RLKVWDEKDQ PRVHVVPAFA PYYSPQAEAA ATPVLCVARN
401: VACGVRGGFF RDFDDSLLPR IAEISYENDA EDIPSPPDVS HYLVSEDDTS GLNGNKDPLS FDGMADTEVE RRLKEAISAS SAVLPAANID PRIAAPVQFP
501: MASASSVSVP VPVQVVQQAI QPSAMAFPSI PFQQPQQPTS IAKHLVPSEP SLQSSPAREE GEVPESELDP DTRRRLLILQ HGQDTRDPAP SEPSFPQRPP
601: VQAPPSHVQS RNGWFPVEEE MDPAQIRRAV SKEYPLDSEM IHMEKHRPRH PSFFSKIDNS TQSDRMLHEN RRPPKESLRR DEQLRSNNNL PDSHPFYGED
701: ASWNQSSSRN SDLDFLPERS VSATETSADV LHGIAIKCGA KVEYKPSLVS STDLRFSVEA WLSNQKIGEG IGKSRREALH KAAEASIQNL ADGYMRANGD
801: PGPSHRDATP FTNENISMGN ANALNNQPFA RDETALPVSS RPTDPRLEGS MRHTGSITAL RELCASEGLE MAFQSQRQLP SDMVHRDELH AQVEIDGRVV
901: GEGVGSTWDE ARMQAAERAL SSVRSMLGQP LHKRQGSPRS FGGMSNKRLK PDFQRSLQRM PSSGRYS
Arabidopsis Description
CPL1RNA polymerase II C-terminal domain phosphatase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q5YDB6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.