Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH00194 | Soybean | nucleus | 91.9 | 91.46 |
| VIT_08s0007g02130.t01 | Wine grape | nucleus | 61.98 | 60.96 |
| AT5G01270.2 | Thale cress | nucleus | 51.85 | 56.2 |
| GSMUA_Achr10P... | Banana | cytosol | 40.29 | 56.15 |
| Solyc09g014440.2.1 | Tomato | cytosol | 52.32 | 54.33 |
| CDX80779 | Canola | nucleus | 50.42 | 53.54 |
| Bra005692.1-P | Field mustard | nucleus | 50.3 | 53.35 |
| CDY11208 | Canola | nucleus | 50.06 | 53.16 |
| TraesCS3D01G362900.4 | Wheat | cytosol, nucleus | 42.67 | 50.85 |
| TraesCS3A01G370000.2 | Wheat | mitochondrion | 42.55 | 48.31 |
| TraesCS3B01G401900.2 | Wheat | mitochondrion | 42.19 | 47.07 |
| Os01t0857000-01 | Rice | cytosol, nucleus, plastid | 41.48 | 46.03 |
| KXG33725 | Sorghum | cytosol, nucleus, plastid | 40.88 | 45.86 |
| Zm00001d042804_P001 | Maize | plastid | 39.09 | 42.05 |
| KRH50009 | Soybean | nucleus | 44.46 | 39.02 |
| KRH20483 | Soybean | nucleus | 44.58 | 38.96 |
| KRH21480 | Soybean | nucleus | 44.1 | 38.54 |
| KRH10835 | Soybean | nucleus | 43.98 | 38.52 |
Protein Annotations
| EntrezGene:100777842 | MapMan:15.3.2.2 | MapMan:18.4.25.1.5 | Gene3D:3.30.160.20 | EMBL:ACUP02004355 | InterPro:FCP1_dom |
| EnsemblPlantsGene:GLYMA_07G148100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006139 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008420 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016591 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0070940 | InterPro:HAD-like_sf | InterPro:IPR004274 |
| InterPro:IPR014720 | UniProt:K7L1T3 | EnsemblPlants:KRH49327 | ProteinID:KRH49327 | ProteinID:KRH49327.1 | PFAM:PF00035 |
| PFAM:PF03031 | PFscan:PS50137 | PFscan:PS50969 | PANTHER:PTHR23081 | PANTHER:PTHR23081:SF10 | SMART:SM00358 |
| SMART:SM00577 | SUPFAM:SSF54768 | SUPFAM:SSF56784 | UniParc:UPI000295EB1B | InterPro:dsRBD_dom | : |
Description
hypothetical protein
Coordinates
chr7:-:17802537..17811827
Molecular Weight (calculated)
93661.6 Da
IEP (calculated)
6.817
GRAVY (calculated)
-0.423
Length
839 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRLGFKHEV YDGDKHIGEL DVIPPSSLTT TTSFHNNFRF PNNEIRIHHF SAKSERCPPL SILQTVAAFN VRCKLDSSVA TEQKELIAIH ASCFYEMKTA
101: VVVVNDEEIH LVSMPSKRKK FPCFWCFAVP LGLYDACLGM LNLRCLAIVF DLDETLIVAN TMKSFEDRIE ALRGWLSRET DPLRVQGMSS ELKRYLEDRL
201: LLKQYAESDT VVDNGKVYKV QMEEAPPLSG SHEKLVRPVV RLQERNIVLT RINPEIRDTS VLVRLRPAWD DLRSYLTAKG RKRFEVYVCT MAERDYALEI
301: WRLLDPGAHL IGLKQVLNRV ICVKSGSRKS LLNVFQDGVC HPKMAMVIDD RSKVWVDKDQ PRVHVVPAFT PYYAPQAETA NAVPVLCVAR NVACNVRGCF
401: FKEFDESLLQ RIAEIFFEDD IGLLPHPPDV SNYLMSEDVP NGNANAPFSE GMNGAEVERR LSQPDDKFSV DLSTRPMTNS VEFRHETSQP TAGIISNVTG
501: PGSSRTLIPS QKPGLLGPPV KHDGNSVDRD YDMRKGLLGM RHGPDIRGQI SAEPPLILRP PNQASPSLMQ PFGGGLVEDD IASRSQTNSW PSASVKESNV
601: IKSDKHQAQQ KPFSNSVIGS SPNVLLPQAS QLKAEEATSV SDLQRQIVPS KSQLSSEDGI SQNHASSNSK DFQHEAGKMN FLSPLSIQVL QEIGRRCNSK
701: VEFKSILSTS KDLQFSVEVL FTGEKIGVGM GRTRKDAQQQ AAENALRSLA EKYVAHVEPQ CRAVDKDFDK LSLGCDNGFL WDVINPESSE PQPEDGVSRE
801: NASEALDAET RSSTPNAINQ QMDKRMSSPR MPNSKRLKE
101: VVVVNDEEIH LVSMPSKRKK FPCFWCFAVP LGLYDACLGM LNLRCLAIVF DLDETLIVAN TMKSFEDRIE ALRGWLSRET DPLRVQGMSS ELKRYLEDRL
201: LLKQYAESDT VVDNGKVYKV QMEEAPPLSG SHEKLVRPVV RLQERNIVLT RINPEIRDTS VLVRLRPAWD DLRSYLTAKG RKRFEVYVCT MAERDYALEI
301: WRLLDPGAHL IGLKQVLNRV ICVKSGSRKS LLNVFQDGVC HPKMAMVIDD RSKVWVDKDQ PRVHVVPAFT PYYAPQAETA NAVPVLCVAR NVACNVRGCF
401: FKEFDESLLQ RIAEIFFEDD IGLLPHPPDV SNYLMSEDVP NGNANAPFSE GMNGAEVERR LSQPDDKFSV DLSTRPMTNS VEFRHETSQP TAGIISNVTG
501: PGSSRTLIPS QKPGLLGPPV KHDGNSVDRD YDMRKGLLGM RHGPDIRGQI SAEPPLILRP PNQASPSLMQ PFGGGLVEDD IASRSQTNSW PSASVKESNV
601: IKSDKHQAQQ KPFSNSVIGS SPNVLLPQAS QLKAEEATSV SDLQRQIVPS KSQLSSEDGI SQNHASSNSK DFQHEAGKMN FLSPLSIQVL QEIGRRCNSK
701: VEFKSILSTS KDLQFSVEVL FTGEKIGVGM GRTRKDAQQQ AAENALRSLA EKYVAHVEPQ CRAVDKDFDK LSLGCDNGFL WDVINPESSE PQPEDGVSRE
801: NASEALDAET RSSTPNAINQ QMDKRMSSPR MPNSKRLKE
001: MYSNNRVEVF HGDGRLGELE IYPSRELNQQ QDDVMKQRKK KQREVMELAK MGIRISHFSQ SGERCPPLAI LTTISSCGLC FKLEASPSPA QESLSLFYSS
101: CLRDNKTAVM LLGGEELHLV AMYSENIKND RPCFWAFSVA PGIYDSCLVM LNLRCLGIVF DLDETLVVAN TMRSFEDKID GFQRRINNEM DPQRLAVIVA
201: EMKRYQDDKN LLKQYIESDQ VVENGEVIKV QSEIVPALSD NHQPLVRPLI RLQEKNIILT RINPMIRDTS VLVRMRPSWE ELRSYLTAKG RKRFEVYVCT
301: MAERDYALEM WRLLDPEGNL INTNDLLARI VCVKSGFKKS LFNVFLDGTC HPKMALVIDD RLKVWDEKDQ PRVHVVPAFA PYYSPQAEAA ATPVLCVARN
401: VACGVRGGFF RDFDDSLLPR IAEISYENDA EDIPSPPDVS HYLVSEDDTS GLNGNKDPLS FDGMADTEVE RRLKEAISAS SAVLPAANID PRIAAPVQFP
501: MASASSVSVP VPVQVVQQAI QPSAMAFPSI PFQQPQQPTS IAKHLVPSEP SLQSSPAREE GEVPESELDP DTRRRLLILQ HGQDTRDPAP SEPSFPQRPP
601: VQAPPSHVQS RNGWFPVEEE MDPAQIRRAV SKEYPLDSEM IHMEKHRPRH PSFFSKIDNS TQSDRMLHEN RRPPKESLRR DEQLRSNNNL PDSHPFYGED
701: ASWNQSSSRN SDLDFLPERS VSATETSADV LHGIAIKCGA KVEYKPSLVS STDLRFSVEA WLSNQKIGEG IGKSRREALH KAAEASIQNL ADGYMRANGD
801: PGPSHRDATP FTNENISMGN ANALNNQPFA RDETALPVSS RPTDPRLEGS MRHTGSITAL RELCASEGLE MAFQSQRQLP SDMVHRDELH AQVEIDGRVV
901: GEGVGSTWDE ARMQAAERAL SSVRSMLGQP LHKRQGSPRS FGGMSNKRLK PDFQRSLQRM PSSGRYS
101: CLRDNKTAVM LLGGEELHLV AMYSENIKND RPCFWAFSVA PGIYDSCLVM LNLRCLGIVF DLDETLVVAN TMRSFEDKID GFQRRINNEM DPQRLAVIVA
201: EMKRYQDDKN LLKQYIESDQ VVENGEVIKV QSEIVPALSD NHQPLVRPLI RLQEKNIILT RINPMIRDTS VLVRMRPSWE ELRSYLTAKG RKRFEVYVCT
301: MAERDYALEM WRLLDPEGNL INTNDLLARI VCVKSGFKKS LFNVFLDGTC HPKMALVIDD RLKVWDEKDQ PRVHVVPAFA PYYSPQAEAA ATPVLCVARN
401: VACGVRGGFF RDFDDSLLPR IAEISYENDA EDIPSPPDVS HYLVSEDDTS GLNGNKDPLS FDGMADTEVE RRLKEAISAS SAVLPAANID PRIAAPVQFP
501: MASASSVSVP VPVQVVQQAI QPSAMAFPSI PFQQPQQPTS IAKHLVPSEP SLQSSPAREE GEVPESELDP DTRRRLLILQ HGQDTRDPAP SEPSFPQRPP
601: VQAPPSHVQS RNGWFPVEEE MDPAQIRRAV SKEYPLDSEM IHMEKHRPRH PSFFSKIDNS TQSDRMLHEN RRPPKESLRR DEQLRSNNNL PDSHPFYGED
701: ASWNQSSSRN SDLDFLPERS VSATETSADV LHGIAIKCGA KVEYKPSLVS STDLRFSVEA WLSNQKIGEG IGKSRREALH KAAEASIQNL ADGYMRANGD
801: PGPSHRDATP FTNENISMGN ANALNNQPFA RDETALPVSS RPTDPRLEGS MRHTGSITAL RELCASEGLE MAFQSQRQLP SDMVHRDELH AQVEIDGRVV
901: GEGVGSTWDE ARMQAAERAL SSVRSMLGQP LHKRQGSPRS FGGMSNKRLK PDFQRSLQRM PSSGRYS
Arabidopsis Description
CPL1RNA polymerase II C-terminal domain phosphatase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q5YDB6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.