Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G362900.4 | Wheat | cytosol, nucleus | 92.02 | 98.3 |
| TraesCS3A01G370000.2 | Wheat | mitochondrion | 95.74 | 97.43 |
| Os01t0857000-01 | Rice | cytosol, nucleus, plastid | 78.86 | 78.44 |
| KXG33725 | Sorghum | cytosol, nucleus, plastid | 73.94 | 74.33 |
| Zm00001d042804_P001 | Maize | plastid | 72.07 | 69.49 |
| GSMUA_Achr10P... | Banana | cytosol | 47.34 | 59.14 |
| AT5G01270.2 | Thale cress | nucleus | 46.94 | 45.61 |
| VIT_08s0007g02130.t01 | Wine grape | nucleus | 49.47 | 43.61 |
| CDY11208 | Canola | nucleus | 45.74 | 43.54 |
| Bra005692.1-P | Field mustard | nucleus | 45.61 | 43.36 |
| Solyc09g014440.2.1 | Tomato | cytosol | 46.54 | 43.32 |
| CDX80779 | Canola | nucleus | 45.35 | 43.16 |
| KRH49327 | Soybean | nucleus | 47.07 | 42.19 |
| KRH00194 | Soybean | nucleus | 46.81 | 41.76 |
| TraesCS6B01G264000.3 | Wheat | nucleus | 42.95 | 34.29 |
| TraesCS2B01G390500.3 | Wheat | nucleus | 41.22 | 32.67 |
Protein Annotations
| MapMan:15.3.2.2 | MapMan:18.4.25.1.5 | Gene3D:3.30.160.20 | ncoils:Coil | InterPro:FCP1_dom | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006950 | GO:GO:0006970 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 |
| GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016791 | GO:GO:0040007 |
| GO:GO:0048589 | InterPro:HAD-like_sf | InterPro:IPR004274 | InterPro:IPR014720 | PFAM:PF00035 | PFAM:PF03031 |
| PFscan:PS50137 | PFscan:PS50969 | PANTHER:PTHR23081 | PANTHER:PTHR23081:SF10 | SMART:SM00358 | SMART:SM00577 |
| SUPFAM:SSF54768 | SUPFAM:SSF56784 | EnsemblPlantsGene:TraesCS3B01G401900 | EnsemblPlants:TraesCS3B01G401900.2 | TIGR:cd00048 | InterPro:dsRBD_dom |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:636447035..636455573
Molecular Weight (calculated)
83677.5 Da
IEP (calculated)
6.299
GRAVY (calculated)
-0.265
Length
752 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRPSPLLPV PGVSASAAAA PPGRAAIMRM FHGDVFLGEV DVFSIKPGPE GALPFPSNEI RISHLSPASE RCPPLAILQT IAPFSVRCKL QARPLPPHPS
101: LHRLYITCFN EYKSAVVVVG DEELHLVAMP SKVEKIPCFW CCSVRVGLYA ASVGMLNLRC LAIVFDLDET LIVANTMRSF ESRIEMLSRR MDIEDDPVRV
201: AGMSAEIKRY IEDRELLKEF IDTDTVTDNG RIVGTQKEEV QPMPGVQERL VRPVIRLPER NAILTRINPE IRDTSVFVKL RPAWEDLRSY LTAKGRKRFE
301: VYVCTMAERD YALEIWRLLD PEANLISLNN LSDRVVCVKA GSKKSLQHVF RDGGCHPKMA MVIDDRLQVW DEKDQHRVHV VPAYAPYYAP QAKMANAVPV
401: LCVARNVACN VRGGFFREFD ENLLKKVFEL LYENELLDLP YAPDVGDYLV CEDPNFPQSN KDPAPIPEGM SGAEVEKRLN GRAYQADQKQ ISSSIRPPDD
501: ARVPIRGTLG SSNVQPNGGS MAIVPSLFVM VLQEIGRLCN SKVEFRSTVS TSKITQFSVE VLFSNEKIGN GIGKTRDEAQ VQAAEKALQN LQSNYLSYVA
601: PIAGVLNKDT SKSSRNGNGF LEDDLDSDGD TAMQEPSGSK SEQKDHSNVD RLPSVLSLIR ELVRHDATPD ISISDCLEDQ HVVFRDQVRN PGSATNEEYH
701: FQVELAGQIL GNGIGVNKDF AKLQAAEDAL RFLKTTTDPQ IKKHLRPIRC SS
101: LHRLYITCFN EYKSAVVVVG DEELHLVAMP SKVEKIPCFW CCSVRVGLYA ASVGMLNLRC LAIVFDLDET LIVANTMRSF ESRIEMLSRR MDIEDDPVRV
201: AGMSAEIKRY IEDRELLKEF IDTDTVTDNG RIVGTQKEEV QPMPGVQERL VRPVIRLPER NAILTRINPE IRDTSVFVKL RPAWEDLRSY LTAKGRKRFE
301: VYVCTMAERD YALEIWRLLD PEANLISLNN LSDRVVCVKA GSKKSLQHVF RDGGCHPKMA MVIDDRLQVW DEKDQHRVHV VPAYAPYYAP QAKMANAVPV
401: LCVARNVACN VRGGFFREFD ENLLKKVFEL LYENELLDLP YAPDVGDYLV CEDPNFPQSN KDPAPIPEGM SGAEVEKRLN GRAYQADQKQ ISSSIRPPDD
501: ARVPIRGTLG SSNVQPNGGS MAIVPSLFVM VLQEIGRLCN SKVEFRSTVS TSKITQFSVE VLFSNEKIGN GIGKTRDEAQ VQAAEKALQN LQSNYLSYVA
601: PIAGVLNKDT SKSSRNGNGF LEDDLDSDGD TAMQEPSGSK SEQKDHSNVD RLPSVLSLIR ELVRHDATPD ISISDCLEDQ HVVFRDQVRN PGSATNEEYH
701: FQVELAGQIL GNGIGVNKDF AKLQAAEDAL RFLKTTTDPQ IKKHLRPIRC SS
001: MNRLGHKSVV YHGDLRLGEL DVNHVSSSHE FRFPNDEIRI HHLSPAGERC PPLAILQTIA SFAVRCKLES SAPVKSQELM HLHAVCFHEL KTAVVMLGDE
101: EIHLVAMPSK EKKFPCFWCF SVPSGLYDSC LRMLNTRCLS IVFDLDETLI VANTMKSFED RIEALKSWIS REMDPVRING MSAELKRYMD DRMLLKQYID
201: NDYAFDNGVL LKAQPEEVRP TSDGQEKVCR PVIRLPEKNT VLTRIKPEIR DTSVLVKLRP AWEELRSYLT AKTRKRFEVY VCTMAERDYA LEMWRLLDPE
301: AHLISLKELR DRIVCVKPDA KKSLLSVFNG GICHPKMAMV IDDRMKVWED KDQPRVHVVS AYLPYYAPQA ETALVVPHLC VARNVACNVR GYFFKEFDES
401: LMSSISLVYY EDDVENLPPS PDVSNYVVIE DPGFASNGNI NAPPINEGMC GGEVERRLNQ AAAADHSTLP ATSNAEQKPE TPKPQIAVIP NNASTATAAA
501: LLPSHKPSLL GAPRRDGFTF SDGGRPLMMR PGVDIRNQNF NQPPILAKIP MQPPSSSMHS PGGWLVDDEN RPSFPGRPSG LYPSQFPHGT PGSAPVGPFA
601: HPSHLRSEEV AMDDDLKRQN PSRQTTEGGI SQNHLVSNGR EHHTDGGKSN GGQSHLFVSA LQEIGRRCGS KVEFRTVIST NKELQFSVEV LFTGEKIGIG
701: MAKTKKDAHQ QAAENALRSL AEKYVAHVAP LARETEKGPE NDNGFLWESS EDVSNKGLEE EAPKENISEL VLRK
101: EIHLVAMPSK EKKFPCFWCF SVPSGLYDSC LRMLNTRCLS IVFDLDETLI VANTMKSFED RIEALKSWIS REMDPVRING MSAELKRYMD DRMLLKQYID
201: NDYAFDNGVL LKAQPEEVRP TSDGQEKVCR PVIRLPEKNT VLTRIKPEIR DTSVLVKLRP AWEELRSYLT AKTRKRFEVY VCTMAERDYA LEMWRLLDPE
301: AHLISLKELR DRIVCVKPDA KKSLLSVFNG GICHPKMAMV IDDRMKVWED KDQPRVHVVS AYLPYYAPQA ETALVVPHLC VARNVACNVR GYFFKEFDES
401: LMSSISLVYY EDDVENLPPS PDVSNYVVIE DPGFASNGNI NAPPINEGMC GGEVERRLNQ AAAADHSTLP ATSNAEQKPE TPKPQIAVIP NNASTATAAA
501: LLPSHKPSLL GAPRRDGFTF SDGGRPLMMR PGVDIRNQNF NQPPILAKIP MQPPSSSMHS PGGWLVDDEN RPSFPGRPSG LYPSQFPHGT PGSAPVGPFA
601: HPSHLRSEEV AMDDDLKRQN PSRQTTEGGI SQNHLVSNGR EHHTDGGKSN GGQSHLFVSA LQEIGRRCGS KVEFRTVIST NKELQFSVEV LFTGEKIGIG
701: MAKTKKDAHQ QAAENALRSL AEKYVAHVAP LARETEKGPE NDNGFLWESS EDVSNKGLEE EAPKENISEL VLRK
Arabidopsis Description
CPL2Carboxyl-terminal domain (Ctd) phosphatase-like 2 [Source:UniProtKB/TrEMBL;Acc:F4K802]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.