Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005692.1-P | Field mustard | nucleus | 94.05 | 93.93 |
| CDX80779 | Canola | nucleus | 92.41 | 92.41 |
| AT5G01270.2 | Thale cress | nucleus | 78.35 | 79.97 |
| CDX81143 | Canola | extracellular, plasma membrane, plastid | 12.53 | 55.93 |
| CDX81142 | Canola | cytosol | 14.05 | 54.41 |
| VIT_08s0007g02130.t01 | Wine grape | nucleus | 57.97 | 53.69 |
| GSMUA_Achr10P... | Banana | cytosol | 40.0 | 52.49 |
| KRH49327 | Soybean | nucleus | 53.16 | 50.06 |
| KRH00194 | Soybean | nucleus | 53.16 | 49.82 |
| TraesCS3D01G362900.4 | Wheat | cytosol, nucleus | 43.67 | 49.01 |
| Solyc09g014440.2.1 | Tomato | cytosol | 50.0 | 48.89 |
| TraesCS3A01G370000.2 | Wheat | mitochondrion | 43.54 | 46.55 |
| TraesCS3B01G401900.2 | Wheat | mitochondrion | 43.54 | 45.74 |
| KXG33725 | Sorghum | cytosol, nucleus, plastid | 42.66 | 45.05 |
| Os01t0857000-01 | Rice | cytosol, nucleus, plastid | 43.04 | 44.97 |
| Zm00001d042804_P001 | Maize | plastid | 41.39 | 41.92 |
| CDY31421 | Canola | cytosol | 40.51 | 38.19 |
| CDX76438 | Canola | cytosol | 40.51 | 37.78 |
| CDX98696 | Canola | nucleus | 40.0 | 33.91 |
| CDX79083 | Canola | nucleus | 36.2 | 33.29 |
| CDX94046 | Canola | nucleus | 39.87 | 33.12 |
Protein Annotations
| MapMan:15.3.2.2 | MapMan:18.4.25.1.5 | Gene3D:3.30.160.20 | UniProt:A0A078FGN1 | EnsemblPlants:CDY11208 | ProteinID:CDY11208 |
| ProteinID:CDY11208.1 | InterPro:FCP1_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008420 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0070940 | EnsemblPlantsGene:GSBRNA2T00049226001 |
| InterPro:HAD-like_sf | InterPro:IPR004274 | InterPro:IPR014720 | PFAM:PF00035 | PFAM:PF03031 | PFscan:PS50137 |
| PFscan:PS50969 | PANTHER:PTHR23081 | PANTHER:PTHR23081:SF10 | SMART:SM00358 | SMART:SM00577 | SUPFAM:SSF54768 |
| SUPFAM:SSF56784 | UniParc:UPI0004EE1333 | InterPro:dsRBD_dom | SEG:seg | : | : |
Description
BnaA03g00440DBnaA03g00440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGN1]
Coordinates
chrLK032010:+:153894..158091
Molecular Weight (calculated)
88064.3 Da
IEP (calculated)
6.586
GRAVY (calculated)
-0.353
Length
790 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRLGQKSVV YHGELRLGEL DVKQVSSSSG NNEFRFPNDE IRIHHVSPAG ERCPPLAILQ TIASFSVRCK LESSAPVKPP ELMRLHAVCF HELKTAVVLL
101: GDSEIHLVAM PSKEKKFPCF WCFSLPLGLY DSCLRMLNTR CLSIVFDLDE TLIVAHTMKS FEDRIEALKV WISREVDPVR IHGMSAELKR FMDDRMLLKQ
201: YIDNDYAFDN GVLLKAQREE VRPTPDGLEK VYRPVIRLPE KNTVLTRINP EIRDTSVLVK LRPAWEELRS YLTANTRKRF EVYVCTMAER DYALEMWRLL
301: DPEAHLIGLK ELRDRIVCVK PGQNSSLASF IPVTLVLVRS FLNFVHLFHY SDAKKSLLNV FKGGICHPKM AMVIDDRVKV WEDKDQPRVH VVPAYLPYYA
401: PQAEASLPVP ILCVARNVAC NVRGYFFKEF DESLMSSISL VYHEDDVETL PPSPDVSNYV IIEDPGFASN GNITAPPVIE GMCGGEVERR LNQASAADSS
501: TPATSNAEQK SETPKPQIAV IPNNASTTTA AALLPSHKPS LLGAPRRDGF TFSDGGRPLM MRPGVDIRNQ NFNQPPLLSR IPMQPPSSSM HPQGGWLVDD
601: ENRAPFPGRP AGGYSNQLPH GIQGSAPVTN PSHLRSEEIC VDDDLKRQNA SRQPTEGQSQ LVSNGGEHHA DSGKSNGGQS HLFVSALQEI GRRCGSKVEF
701: RTVMSTNREL QFSVEVLFTG EKIGIGMAKT KKEAHQQAAE NALRSLAEKY VAYVSPIAGE TEKGSKNENG FLWENNEAIG NEGLEEEEAT
101: GDSEIHLVAM PSKEKKFPCF WCFSLPLGLY DSCLRMLNTR CLSIVFDLDE TLIVAHTMKS FEDRIEALKV WISREVDPVR IHGMSAELKR FMDDRMLLKQ
201: YIDNDYAFDN GVLLKAQREE VRPTPDGLEK VYRPVIRLPE KNTVLTRINP EIRDTSVLVK LRPAWEELRS YLTANTRKRF EVYVCTMAER DYALEMWRLL
301: DPEAHLIGLK ELRDRIVCVK PGQNSSLASF IPVTLVLVRS FLNFVHLFHY SDAKKSLLNV FKGGICHPKM AMVIDDRVKV WEDKDQPRVH VVPAYLPYYA
401: PQAEASLPVP ILCVARNVAC NVRGYFFKEF DESLMSSISL VYHEDDVETL PPSPDVSNYV IIEDPGFASN GNITAPPVIE GMCGGEVERR LNQASAADSS
501: TPATSNAEQK SETPKPQIAV IPNNASTTTA AALLPSHKPS LLGAPRRDGF TFSDGGRPLM MRPGVDIRNQ NFNQPPLLSR IPMQPPSSSM HPQGGWLVDD
601: ENRAPFPGRP AGGYSNQLPH GIQGSAPVTN PSHLRSEEIC VDDDLKRQNA SRQPTEGQSQ LVSNGGEHHA DSGKSNGGQS HLFVSALQEI GRRCGSKVEF
701: RTVMSTNREL QFSVEVLFTG EKIGIGMAKT KKEAHQQAAE NALRSLAEKY VAYVSPIAGE TEKGSKNENG FLWENNEAIG NEGLEEEEAT
001: MNRLGHKSVV YHGDLRLGEL DVNHVSSSHE FRFPNDEIRI HHLSPAGERC PPLAILQTIA SFAVRCKLES SAPVKSQELM HLHAVCFHEL KTAVVMLGDE
101: EIHLVAMPSK EKKFPCFWCF SVPSGLYDSC LRMLNTRCLS IVFDLDETLI VANTMKSFED RIEALKSWIS REMDPVRING MSAELKRYMD DRMLLKQYID
201: NDYAFDNGVL LKAQPEEVRP TSDGQEKVCR PVIRLPEKNT VLTRIKPEIR DTSVLVKLRP AWEELRSYLT AKTRKRFEVY VCTMAERDYA LEMWRLLDPE
301: AHLISLKELR DRIVCVKPDA KKSLLSVFNG GICHPKMAMV IDDRMKVWED KDQPRVHVVS AYLPYYAPQA ETALVVPHLC VARNVACNVR GYFFKEFDES
401: LMSSISLVYY EDDVENLPPS PDVSNYVVIE DPGFASNGNI NAPPINEGMC GGEVERRLNQ AAAADHSTLP ATSNAEQKPE TPKPQIAVIP NNASTATAAA
501: LLPSHKPSLL GAPRRDGFTF SDGGRPLMMR PGVDIRNQNF NQPPILAKIP MQPPSSSMHS PGGWLVDDEN RPSFPGRPSG LYPSQFPHGT PGSAPVGPFA
601: HPSHLRSEEV AMDDDLKRQN PSRQTTEGGI SQNHLVSNGR EHHTDGGKSN GGQSHLFVSA LQEIGRRCGS KVEFRTVIST NKELQFSVEV LFTGEKIGIG
701: MAKTKKDAHQ QAAENALRSL AEKYVAHVAP LARETEKGPE NDNGFLWESS EDVSNKGLEE EAPKENISEL VLRK
101: EIHLVAMPSK EKKFPCFWCF SVPSGLYDSC LRMLNTRCLS IVFDLDETLI VANTMKSFED RIEALKSWIS REMDPVRING MSAELKRYMD DRMLLKQYID
201: NDYAFDNGVL LKAQPEEVRP TSDGQEKVCR PVIRLPEKNT VLTRIKPEIR DTSVLVKLRP AWEELRSYLT AKTRKRFEVY VCTMAERDYA LEMWRLLDPE
301: AHLISLKELR DRIVCVKPDA KKSLLSVFNG GICHPKMAMV IDDRMKVWED KDQPRVHVVS AYLPYYAPQA ETALVVPHLC VARNVACNVR GYFFKEFDES
401: LMSSISLVYY EDDVENLPPS PDVSNYVVIE DPGFASNGNI NAPPINEGMC GGEVERRLNQ AAAADHSTLP ATSNAEQKPE TPKPQIAVIP NNASTATAAA
501: LLPSHKPSLL GAPRRDGFTF SDGGRPLMMR PGVDIRNQNF NQPPILAKIP MQPPSSSMHS PGGWLVDDEN RPSFPGRPSG LYPSQFPHGT PGSAPVGPFA
601: HPSHLRSEEV AMDDDLKRQN PSRQTTEGGI SQNHLVSNGR EHHTDGGKSN GGQSHLFVSA LQEIGRRCGS KVEFRTVIST NKELQFSVEV LFTGEKIGIG
701: MAKTKKDAHQ QAAENALRSL AEKYVAHVAP LARETEKGPE NDNGFLWESS EDVSNKGLEE EAPKENISEL VLRK
Arabidopsis Description
CPL2Carboxyl-terminal domain (Ctd) phosphatase-like 2 [Source:UniProtKB/TrEMBL;Acc:F4K802]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.