Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042804_P001 | Maize | plastid | 90.37 | 86.67 |
| TraesCS3D01G362900.4 | Wheat | cytosol, nucleus | 73.66 | 78.27 |
| Os01t0857000-01 | Rice | cytosol, nucleus, plastid | 77.54 | 76.72 |
| TraesCS3A01G370000.2 | Wheat | mitochondrion | 74.6 | 75.51 |
| TraesCS3B01G401900.2 | Wheat | mitochondrion | 74.33 | 73.94 |
| GSMUA_Achr10P... | Banana | cytosol | 46.66 | 57.97 |
| AT5G01270.2 | Thale cress | nucleus | 45.72 | 44.19 |
| Bra005692.1-P | Field mustard | nucleus | 45.19 | 42.73 |
| VIT_08s0007g02130.t01 | Wine grape | nucleus | 48.66 | 42.67 |
| CDY11208 | Canola | nucleus | 45.05 | 42.66 |
| CDX80779 | Canola | nucleus | 44.79 | 42.41 |
| Solyc09g014440.2.1 | Tomato | cytosol | 45.59 | 42.2 |
| KRH49327 | Soybean | nucleus | 45.86 | 40.88 |
| KRH00194 | Soybean | nucleus | 45.72 | 40.57 |
| EES05486 | Sorghum | cytosol | 43.58 | 34.9 |
| KXG26770 | Sorghum | nucleus | 43.05 | 34.18 |
Protein Annotations
| MapMan:15.3.2.2 | MapMan:18.4.25.1.5 | Gene3D:3.30.160.20 | UniProt:A0A1B6Q729 | ncoils:Coil | InterPro:FCP1_dom |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006464 | GO:GO:0006950 | GO:GO:0006970 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008420 |
| GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009987 | GO:GO:0016311 |
| GO:GO:0016787 | GO:GO:0016791 | GO:GO:0019538 | GO:GO:0040007 | GO:GO:0048589 | GO:GO:0070940 |
| InterPro:HAD-like_sf | InterPro:IPR004274 | InterPro:IPR014720 | EnsemblPlants:KXG33725 | ProteinID:KXG33725 | ProteinID:KXG33725.1 |
| PFAM:PF00035 | PFAM:PF03031 | PFscan:PS50137 | PFscan:PS50969 | PANTHER:PTHR23081 | PANTHER:PTHR23081:SF10 |
| SMART:SM00358 | SMART:SM00577 | EnsemblPlantsGene:SORBI_3003G361800 | SUPFAM:SSF54768 | SUPFAM:SSF56784 | UniParc:UPI00081AD134 |
| InterPro:dsRBD_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:67939480..67949527
Molecular Weight (calculated)
82845.3 Da
IEP (calculated)
5.939
GRAVY (calculated)
-0.364
Length
748 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPRPPPPG ALGGGVGGSG GVAPAAGAPA GVSMRMFHGE VYLGEMEVFP MKQGGEGGLP FPSNEIRVSH LSPASERCPP LAILQTIAPF SVRCKLHTKL
101: TPPNPSLQRL YLTCFNEFKS AVVVVGDEEL HLVAMPTKSG KMPCFWCCSA RSGLYAASVG MLNLRCLAIV FDLDETLIVA NTMKSFEDRI EMLSRRMDVE
201: DDPIRITGMS AEIKRYIEDK ELLKEFIDTD TVTDNGKIVG TQKEEVQPMS GGQERVLRPV IRLPDRNAIL TRINPENRDT SVFVKLRPAW EELRSYLTAK
301: GRKRFEVYVC TMAERDYALE MWRLLDPEGN LISPQQLSER VNCVKSGSRK SLQNVFRDRG CHPKMAMVID DRLNVWDDKD QHRVHVVPAY TPYYAPQAEM
401: ANAVPVLCVA RNVACNVRGG FFREFDENLL RKVFELYYEN GLLDLPYAPD VGDYLVCEDT NFVPGNKDQA PIPEGMRGNE VEKRLNGQSY RWEQREGQQM
501: SFSTRSPDDE GMPIRGTGGV RTIQPNGGSL AITPSVYVTV LQEIGQLCDS KVEFRSTVSN GKSMLFSVEV LFSNEKIGIG IGKTRDEAQV QAAEKALQNL
601: ESSYLSSVSL VAGVPKKESR KPPGSGNGFL EDAPCSDNDI SMREPSGSTL KLDDSNSMDK LSSIMSLIRE HCLEDQHVVF RDQVQNSSPA RNEEYHFQVE
701: LAGLILGRGV GSDREAAKLL AAEEALKTLK STTDPQIKKY LRPVRCNG
101: TPPNPSLQRL YLTCFNEFKS AVVVVGDEEL HLVAMPTKSG KMPCFWCCSA RSGLYAASVG MLNLRCLAIV FDLDETLIVA NTMKSFEDRI EMLSRRMDVE
201: DDPIRITGMS AEIKRYIEDK ELLKEFIDTD TVTDNGKIVG TQKEEVQPMS GGQERVLRPV IRLPDRNAIL TRINPENRDT SVFVKLRPAW EELRSYLTAK
301: GRKRFEVYVC TMAERDYALE MWRLLDPEGN LISPQQLSER VNCVKSGSRK SLQNVFRDRG CHPKMAMVID DRLNVWDDKD QHRVHVVPAY TPYYAPQAEM
401: ANAVPVLCVA RNVACNVRGG FFREFDENLL RKVFELYYEN GLLDLPYAPD VGDYLVCEDT NFVPGNKDQA PIPEGMRGNE VEKRLNGQSY RWEQREGQQM
501: SFSTRSPDDE GMPIRGTGGV RTIQPNGGSL AITPSVYVTV LQEIGQLCDS KVEFRSTVSN GKSMLFSVEV LFSNEKIGIG IGKTRDEAQV QAAEKALQNL
601: ESSYLSSVSL VAGVPKKESR KPPGSGNGFL EDAPCSDNDI SMREPSGSTL KLDDSNSMDK LSSIMSLIRE HCLEDQHVVF RDQVQNSSPA RNEEYHFQVE
701: LAGLILGRGV GSDREAAKLL AAEEALKTLK STTDPQIKKY LRPVRCNG
001: MNRLGHKSVV YHGDLRLGEL DVNHVSSSHE FRFPNDEIRI HHLSPAGERC PPLAILQTIA SFAVRCKLES SAPVKSQELM HLHAVCFHEL KTAVVMLGDE
101: EIHLVAMPSK EKKFPCFWCF SVPSGLYDSC LRMLNTRCLS IVFDLDETLI VANTMKSFED RIEALKSWIS REMDPVRING MSAELKRYMD DRMLLKQYID
201: NDYAFDNGVL LKAQPEEVRP TSDGQEKVCR PVIRLPEKNT VLTRIKPEIR DTSVLVKLRP AWEELRSYLT AKTRKRFEVY VCTMAERDYA LEMWRLLDPE
301: AHLISLKELR DRIVCVKPDA KKSLLSVFNG GICHPKMAMV IDDRMKVWED KDQPRVHVVS AYLPYYAPQA ETALVVPHLC VARNVACNVR GYFFKEFDES
401: LMSSISLVYY EDDVENLPPS PDVSNYVVIE DPGFASNGNI NAPPINEGMC GGEVERRLNQ AAAADHSTLP ATSNAEQKPE TPKPQIAVIP NNASTATAAA
501: LLPSHKPSLL GAPRRDGFTF SDGGRPLMMR PGVDIRNQNF NQPPILAKIP MQPPSSSMHS PGGWLVDDEN RPSFPGRPSG LYPSQFPHGT PGSAPVGPFA
601: HPSHLRSEEV AMDDDLKRQN PSRQTTEGGI SQNHLVSNGR EHHTDGGKSN GGQSHLFVSA LQEIGRRCGS KVEFRTVIST NKELQFSVEV LFTGEKIGIG
701: MAKTKKDAHQ QAAENALRSL AEKYVAHVAP LARETEKGPE NDNGFLWESS EDVSNKGLEE EAPKENISEL VLRK
101: EIHLVAMPSK EKKFPCFWCF SVPSGLYDSC LRMLNTRCLS IVFDLDETLI VANTMKSFED RIEALKSWIS REMDPVRING MSAELKRYMD DRMLLKQYID
201: NDYAFDNGVL LKAQPEEVRP TSDGQEKVCR PVIRLPEKNT VLTRIKPEIR DTSVLVKLRP AWEELRSYLT AKTRKRFEVY VCTMAERDYA LEMWRLLDPE
301: AHLISLKELR DRIVCVKPDA KKSLLSVFNG GICHPKMAMV IDDRMKVWED KDQPRVHVVS AYLPYYAPQA ETALVVPHLC VARNVACNVR GYFFKEFDES
401: LMSSISLVYY EDDVENLPPS PDVSNYVVIE DPGFASNGNI NAPPINEGMC GGEVERRLNQ AAAADHSTLP ATSNAEQKPE TPKPQIAVIP NNASTATAAA
501: LLPSHKPSLL GAPRRDGFTF SDGGRPLMMR PGVDIRNQNF NQPPILAKIP MQPPSSSMHS PGGWLVDDEN RPSFPGRPSG LYPSQFPHGT PGSAPVGPFA
601: HPSHLRSEEV AMDDDLKRQN PSRQTTEGGI SQNHLVSNGR EHHTDGGKSN GGQSHLFVSA LQEIGRRCGS KVEFRTVIST NKELQFSVEV LFTGEKIGIG
701: MAKTKKDAHQ QAAENALRSL AEKYVAHVAP LARETEKGPE NDNGFLWESS EDVSNKGLEE EAPKENISEL VLRK
Arabidopsis Description
CPL2Carboxyl-terminal domain (Ctd) phosphatase-like 2 [Source:UniProtKB/TrEMBL;Acc:F4K802]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.