Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11208 | Canola | nucleus | 93.93 | 94.05 |
| AT5G01270.2 | Thale cress | nucleus | 79.77 | 81.52 |
| VIT_08s0007g02130.t01 | Wine grape | nucleus | 58.41 | 54.16 |
| GSMUA_Achr10P... | Banana | cytosol | 39.82 | 52.33 |
| KRH49327 | Soybean | nucleus | 53.35 | 50.3 |
| KRH00194 | Soybean | nucleus | 53.48 | 50.18 |
| Solyc09g014440.2.1 | Tomato | cytosol | 50.32 | 49.26 |
| TraesCS3D01G362900.4 | Wheat | cytosol, nucleus | 43.49 | 48.86 |
| TraesCS3A01G370000.2 | Wheat | mitochondrion | 43.36 | 46.41 |
| TraesCS3B01G401900.2 | Wheat | mitochondrion | 43.36 | 45.61 |
| KXG33725 | Sorghum | cytosol, nucleus, plastid | 42.73 | 45.19 |
| Os01t0857000-01 | Rice | cytosol, nucleus, plastid | 43.11 | 45.11 |
| Zm00001d042804_P001 | Maize | plastid | 41.47 | 42.05 |
| Bra020905.1-P | Field mustard | cytosol | 40.58 | 37.9 |
| Bra038764.1-P | Field mustard | nucleus | 40.08 | 33.47 |
| Bra013546.1-P | Field mustard | nucleus | 36.66 | 33.03 |
Protein Annotations
| MapMan:15.3.2.2 | MapMan:18.4.25.1.5 | Gene3D:3.30.160.20 | EnsemblPlantsGene:Bra005692 | EnsemblPlants:Bra005692.1 | EnsemblPlants:Bra005692.1-P |
| InterPro:FCP1_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004647 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0006970 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008420 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009719 |
| GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009987 | GO:GO:0016311 | GO:GO:0016787 | GO:GO:0016791 |
| GO:GO:0019538 | GO:GO:0040007 | GO:GO:0045893 | GO:GO:0048589 | GO:GO:0070940 | InterPro:HAD-like_sf |
| InterPro:IPR004274 | InterPro:IPR014720 | UniProt:M4CNA4 | PFAM:PF00035 | PFAM:PF03031 | PFscan:PS50137 |
| PFscan:PS50969 | PANTHER:PTHR23081 | PANTHER:PTHR23081:SF10 | SMART:SM00358 | SMART:SM00577 | SUPFAM:SSF54768 |
| SUPFAM:SSF56784 | UniParc:UPI000253FA2C | InterPro:dsRBD_dom | SEG:seg | : | : |
Description
AT5G01270 (E=8e-194) CPL2, ATCPL2 | CPL2; double-stranded RNA binding / phosphatase
Coordinates
chrA03:+:147164..151027
Molecular Weight (calculated)
87894.1 Da
IEP (calculated)
6.514
GRAVY (calculated)
-0.341
Length
791 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRLGQKSVV YHGELRLGEL DVKQVSSASG NNEFRFPNDE IRIHHVSPAG ERCPPLAILQ TIASFSVRCK LESSAPVKPP ELMRLHAVCF HELKTAVVLL
101: GETEIHLVAM PSKEKKFPCF WCFSLPLGLY DSCLRMLNTR CLSIVFDLDE TLIVAHTMKS FEDRIEALKV WISREVDPVR IHGMSAELKR FMDDRMLLKQ
201: YIDNDYAFDN GVLLKAQREE VRPTSDGLEK VYRPVIRLPE KNTVLTRINP EIRDTSVLVK LRPAWEELRS YLTANTRKRF EVYVCTMAER DYALEMWRLL
301: DPEAHLISLK ELRDRIVCVK PGQNSSLASF IPVTLVLVRS LYFASSLVPD AKKSLLNVFK GGICHPKMAM VIDDRVKVWE DKDQPRVHVV PAYLPYYAPQ
401: AEASLPVPIL CVARNVACNV RGYFFKEFDE SLMSSISLVY HEDDVETLPP SPDVSNYVII EDPGFASNGN ITAPPVIEGM CGGEVERRLN QASAADSSTP
501: ATSNAEQKSE TPKPQIAVIP NNASTTTAAA LLPSHKPSLL GAPKRDGFTF SDGGRPLMMR PGVDIRNQNF NQPPLLSRIP MQPPSSSMHP QGGWLVDDEN
601: RAPFPGRPAG GYSNQLPHGI QGSAPVTNPS HLRSEELCVD DDLKRQNASR QPTEGGIPQS QLVSNGGEHH ADSGKSNGGQ SHLFVSALQE IGRRCGSKVE
701: FRTVMSTNRE LQFSVEVLFT GEKIGIGMAK TKKEAHQQAA ENALRSLAEK YVAYVSPIAG ETEKGSKNEN GFLWENNEAV GNEGLEEEEA T
101: GETEIHLVAM PSKEKKFPCF WCFSLPLGLY DSCLRMLNTR CLSIVFDLDE TLIVAHTMKS FEDRIEALKV WISREVDPVR IHGMSAELKR FMDDRMLLKQ
201: YIDNDYAFDN GVLLKAQREE VRPTSDGLEK VYRPVIRLPE KNTVLTRINP EIRDTSVLVK LRPAWEELRS YLTANTRKRF EVYVCTMAER DYALEMWRLL
301: DPEAHLISLK ELRDRIVCVK PGQNSSLASF IPVTLVLVRS LYFASSLVPD AKKSLLNVFK GGICHPKMAM VIDDRVKVWE DKDQPRVHVV PAYLPYYAPQ
401: AEASLPVPIL CVARNVACNV RGYFFKEFDE SLMSSISLVY HEDDVETLPP SPDVSNYVII EDPGFASNGN ITAPPVIEGM CGGEVERRLN QASAADSSTP
501: ATSNAEQKSE TPKPQIAVIP NNASTTTAAA LLPSHKPSLL GAPKRDGFTF SDGGRPLMMR PGVDIRNQNF NQPPLLSRIP MQPPSSSMHP QGGWLVDDEN
601: RAPFPGRPAG GYSNQLPHGI QGSAPVTNPS HLRSEELCVD DDLKRQNASR QPTEGGIPQS QLVSNGGEHH ADSGKSNGGQ SHLFVSALQE IGRRCGSKVE
701: FRTVMSTNRE LQFSVEVLFT GEKIGIGMAK TKKEAHQQAA ENALRSLAEK YVAYVSPIAG ETEKGSKNEN GFLWENNEAV GNEGLEEEEA T
001: MNRLGHKSVV YHGDLRLGEL DVNHVSSSHE FRFPNDEIRI HHLSPAGERC PPLAILQTIA SFAVRCKLES SAPVKSQELM HLHAVCFHEL KTAVVMLGDE
101: EIHLVAMPSK EKKFPCFWCF SVPSGLYDSC LRMLNTRCLS IVFDLDETLI VANTMKSFED RIEALKSWIS REMDPVRING MSAELKRYMD DRMLLKQYID
201: NDYAFDNGVL LKAQPEEVRP TSDGQEKVCR PVIRLPEKNT VLTRIKPEIR DTSVLVKLRP AWEELRSYLT AKTRKRFEVY VCTMAERDYA LEMWRLLDPE
301: AHLISLKELR DRIVCVKPDA KKSLLSVFNG GICHPKMAMV IDDRMKVWED KDQPRVHVVS AYLPYYAPQA ETALVVPHLC VARNVACNVR GYFFKEFDES
401: LMSSISLVYY EDDVENLPPS PDVSNYVVIE DPGFASNGNI NAPPINEGMC GGEVERRLNQ AAAADHSTLP ATSNAEQKPE TPKPQIAVIP NNASTATAAA
501: LLPSHKPSLL GAPRRDGFTF SDGGRPLMMR PGVDIRNQNF NQPPILAKIP MQPPSSSMHS PGGWLVDDEN RPSFPGRPSG LYPSQFPHGT PGSAPVGPFA
601: HPSHLRSEEV AMDDDLKRQN PSRQTTEGGI SQNHLVSNGR EHHTDGGKSN GGQSHLFVSA LQEIGRRCGS KVEFRTVIST NKELQFSVEV LFTGEKIGIG
701: MAKTKKDAHQ QAAENALRSL AEKYVAHVAP LARETEKGPE NDNGFLWESS EDVSNKGLEE EAPKENISEL VLRK
101: EIHLVAMPSK EKKFPCFWCF SVPSGLYDSC LRMLNTRCLS IVFDLDETLI VANTMKSFED RIEALKSWIS REMDPVRING MSAELKRYMD DRMLLKQYID
201: NDYAFDNGVL LKAQPEEVRP TSDGQEKVCR PVIRLPEKNT VLTRIKPEIR DTSVLVKLRP AWEELRSYLT AKTRKRFEVY VCTMAERDYA LEMWRLLDPE
301: AHLISLKELR DRIVCVKPDA KKSLLSVFNG GICHPKMAMV IDDRMKVWED KDQPRVHVVS AYLPYYAPQA ETALVVPHLC VARNVACNVR GYFFKEFDES
401: LMSSISLVYY EDDVENLPPS PDVSNYVVIE DPGFASNGNI NAPPINEGMC GGEVERRLNQ AAAADHSTLP ATSNAEQKPE TPKPQIAVIP NNASTATAAA
501: LLPSHKPSLL GAPRRDGFTF SDGGRPLMMR PGVDIRNQNF NQPPILAKIP MQPPSSSMHS PGGWLVDDEN RPSFPGRPSG LYPSQFPHGT PGSAPVGPFA
601: HPSHLRSEEV AMDDDLKRQN PSRQTTEGGI SQNHLVSNGR EHHTDGGKSN GGQSHLFVSA LQEIGRRCGS KVEFRTVIST NKELQFSVEV LFTGEKIGIG
701: MAKTKKDAHQ QAAENALRSL AEKYVAHVAP LARETEKGPE NDNGFLWESS EDVSNKGLEE EAPKENISEL VLRK
Arabidopsis Description
CPL2Carboxyl-terminal domain (Ctd) phosphatase-like 2 [Source:UniProtKB/TrEMBL;Acc:F4K802]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.