Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH49327 | Soybean | nucleus | 91.46 | 91.9 |
| VIT_08s0007g02130.t01 | Wine grape | nucleus | 63.11 | 62.37 |
| AT5G01270.2 | Thale cress | nucleus | 51.72 | 56.33 |
| GSMUA_Achr10P... | Banana | cytosol | 40.21 | 56.31 |
| Solyc09g014440.2.1 | Tomato | cytosol | 53.02 | 55.32 |
| CDX80779 | Canola | nucleus | 50.42 | 53.8 |
| Bra005692.1-P | Field mustard | nucleus | 50.18 | 53.48 |
| CDY11208 | Canola | nucleus | 49.82 | 53.16 |
| TraesCS3D01G362900.4 | Wheat | cytosol, nucleus | 42.11 | 50.43 |
| TraesCS3A01G370000.2 | Wheat | mitochondrion | 42.11 | 48.04 |
| TraesCS3B01G401900.2 | Wheat | mitochondrion | 41.76 | 46.81 |
| Os01t0857000-01 | Rice | cytosol, nucleus, plastid | 41.4 | 46.16 |
| KXG33725 | Sorghum | cytosol, nucleus, plastid | 40.57 | 45.72 |
| Zm00001d042804_P001 | Maize | plastid | 38.91 | 42.05 |
| KRH50009 | Soybean | nucleus | 44.13 | 38.91 |
| KRH20483 | Soybean | nucleus | 43.89 | 38.54 |
| KRH21480 | Soybean | nucleus | 43.53 | 38.23 |
| KRH10835 | Soybean | nucleus | 43.42 | 38.2 |
Protein Annotations
| EntrezGene:100811605 | MapMan:15.3.2.2 | MapMan:18.4.25.1.5 | Gene3D:3.30.160.20 | EMBL:ACUP02011406 | InterPro:FCP1_dom |
| EnsemblPlantsGene:GLYMA_18G199400 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006139 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008420 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016591 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0070940 | InterPro:HAD-like_sf | InterPro:IPR004274 |
| InterPro:IPR014720 | UniProt:K7MTG8 | EnsemblPlants:KRH00194 | ProteinID:KRH00194 | ProteinID:KRH00194.1 | PFAM:PF00035 |
| PFAM:PF03031 | PFscan:PS50137 | PFscan:PS50969 | PANTHER:PTHR23081 | PANTHER:PTHR23081:SF10 | SMART:SM00358 |
| SMART:SM00577 | SUPFAM:SSF54768 | SUPFAM:SSF56784 | UniParc:UPI000294AA99 | InterPro:dsRBD_dom | : |
Description
hypothetical protein
Coordinates
chr18:-:47809522..47818852
Molecular Weight (calculated)
94216.2 Da
IEP (calculated)
6.915
GRAVY (calculated)
-0.408
Length
843 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRLGFKHEV YDGDKHVGEL DVIPLSSSST TTPFHNSFRF PNNEIRIHHF SAKSERCPPL SILQTVAAFN VRCKLDSSVA TEQKELIAIH ASCFYEMKTA
101: VVVVNDEEIH LVSMPSKRKK FPCFWCFAVP LGLYDACLAM LNLRCLAIVF DLDETLIVAN TMKSFEDRIE ALRGWLLRET DPLRVQGMSS ELKRYLEDRL
201: LLKQYAESDT VVDNGKVYKV QMEEAPPLSG SHEKLVRPVV RLQERNIVLT RINPEIRDTS VLVRLRPAWE DLRSYLTAKG RKRFEVYVCT MAERDYALEI
301: WRLLDPGAHL IGSKQVLNRV ICVKSGSRKS LLNVFQDGVC HPKMAMVIDD RSKVWEDKDQ PRVHVVPAFT PYYAPQAETA NAVPVLCVAR NVACNVRGCF
401: FKEFDESLLQ RIAEIFFEDD IGLLPLPPDV SNYLMSEDVP NGNANAPISE GINGAEVERR LSQPDDKFSV DLVTRPMTNS VEFRHETSQP TAGIISNVTG
501: PASSRTLIPS QKPGLLGPPV KHDGNSVDRD YDMRKGLLGM RHGPDIRGQI SAEPPLISRP PNQTSPSLIQ PFGGGLVEDD IASRTQTNSW PSASFKESNV
601: IKFDKHQAQQ KPFSHSVIGS SPNVLPPQAS QVKTEEATSV SDLQRHIAPS KSQLSSEDGI SQNHATSNSK DFQNEAGKVN FLPSLSIQVL QEIGRRCNSK
701: VEFKTILSTS KDLQFSVEVL FTGEKIGVGM ARTRKDAQQQ AAENALRSLA EKYVAHVEPQ CRAVDKDFDK LSLGRDNGFL WDVVNLESSE LQPEDGVPRE
801: NASEALDAET RSSTPNAINQ QMDKRVSSPR RMPNSIPSKR LKE
101: VVVVNDEEIH LVSMPSKRKK FPCFWCFAVP LGLYDACLAM LNLRCLAIVF DLDETLIVAN TMKSFEDRIE ALRGWLLRET DPLRVQGMSS ELKRYLEDRL
201: LLKQYAESDT VVDNGKVYKV QMEEAPPLSG SHEKLVRPVV RLQERNIVLT RINPEIRDTS VLVRLRPAWE DLRSYLTAKG RKRFEVYVCT MAERDYALEI
301: WRLLDPGAHL IGSKQVLNRV ICVKSGSRKS LLNVFQDGVC HPKMAMVIDD RSKVWEDKDQ PRVHVVPAFT PYYAPQAETA NAVPVLCVAR NVACNVRGCF
401: FKEFDESLLQ RIAEIFFEDD IGLLPLPPDV SNYLMSEDVP NGNANAPISE GINGAEVERR LSQPDDKFSV DLVTRPMTNS VEFRHETSQP TAGIISNVTG
501: PASSRTLIPS QKPGLLGPPV KHDGNSVDRD YDMRKGLLGM RHGPDIRGQI SAEPPLISRP PNQTSPSLIQ PFGGGLVEDD IASRTQTNSW PSASFKESNV
601: IKFDKHQAQQ KPFSHSVIGS SPNVLPPQAS QVKTEEATSV SDLQRHIAPS KSQLSSEDGI SQNHATSNSK DFQNEAGKVN FLPSLSIQVL QEIGRRCNSK
701: VEFKTILSTS KDLQFSVEVL FTGEKIGVGM ARTRKDAQQQ AAENALRSLA EKYVAHVEPQ CRAVDKDFDK LSLGRDNGFL WDVVNLESSE LQPEDGVPRE
801: NASEALDAET RSSTPNAINQ QMDKRVSSPR RMPNSIPSKR LKE
001: MNRLGHKSVV YHGDLRLGEL DVNHVSSSHE FRFPNDEIRI HHLSPAGERC PPLAILQTIA SFAVRCKLES SAPVKSQELM HLHAVCFHEL KTAVVMLGDE
101: EIHLVAMPSK EKKFPCFWCF SVPSGLYDSC LRMLNTRCLS IVFDLDETLI VANTMKSFED RIEALKSWIS REMDPVRING MSAELKRYMD DRMLLKQYID
201: NDYAFDNGVL LKAQPEEVRP TSDGQEKVCR PVIRLPEKNT VLTRIKPEIR DTSVLVKLRP AWEELRSYLT AKTRKRFEVY VCTMAERDYA LEMWRLLDPE
301: AHLISLKELR DRIVCVKPDA KKSLLSVFNG GICHPKMAMV IDDRMKVWED KDQPRVHVVS AYLPYYAPQA ETALVVPHLC VARNVACNVR GYFFKEFDES
401: LMSSISLVYY EDDVENLPPS PDVSNYVVIE DPGFASNGNI NAPPINEGMC GGEVERRLNQ AAAADHSTLP ATSNAEQKPE TPKPQIAVIP NNASTATAAA
501: LLPSHKPSLL GAPRRDGFTF SDGGRPLMMR PGVDIRNQNF NQPPILAKIP MQPPSSSMHS PGGWLVDDEN RPSFPGRPSG LYPSQFPHGT PGSAPVGPFA
601: HPSHLRSEEV AMDDDLKRQN PSRQTTEGGI SQNHLVSNGR EHHTDGGKSN GGQSHLFVSA LQEIGRRCGS KVEFRTVIST NKELQFSVEV LFTGEKIGIG
701: MAKTKKDAHQ QAAENALRSL AEKYVAHVAP LARETEKGPE NDNGFLWESS EDVSNKGLEE EAPKENISEL
101: EIHLVAMPSK EKKFPCFWCF SVPSGLYDSC LRMLNTRCLS IVFDLDETLI VANTMKSFED RIEALKSWIS REMDPVRING MSAELKRYMD DRMLLKQYID
201: NDYAFDNGVL LKAQPEEVRP TSDGQEKVCR PVIRLPEKNT VLTRIKPEIR DTSVLVKLRP AWEELRSYLT AKTRKRFEVY VCTMAERDYA LEMWRLLDPE
301: AHLISLKELR DRIVCVKPDA KKSLLSVFNG GICHPKMAMV IDDRMKVWED KDQPRVHVVS AYLPYYAPQA ETALVVPHLC VARNVACNVR GYFFKEFDES
401: LMSSISLVYY EDDVENLPPS PDVSNYVVIE DPGFASNGNI NAPPINEGMC GGEVERRLNQ AAAADHSTLP ATSNAEQKPE TPKPQIAVIP NNASTATAAA
501: LLPSHKPSLL GAPRRDGFTF SDGGRPLMMR PGVDIRNQNF NQPPILAKIP MQPPSSSMHS PGGWLVDDEN RPSFPGRPSG LYPSQFPHGT PGSAPVGPFA
601: HPSHLRSEEV AMDDDLKRQN PSRQTTEGGI SQNHLVSNGR EHHTDGGKSN GGQSHLFVSA LQEIGRRCGS KVEFRTVIST NKELQFSVEV LFTGEKIGIG
701: MAKTKKDAHQ QAAENALRSL AEKYVAHVAP LARETEKGPE NDNGFLWESS EDVSNKGLEE EAPKENISEL
Arabidopsis Description
CPL2Carboxyl-terminal domain (Ctd) phosphatase-like 2 [Source:UniProtKB/TrEMBL;Acc:F4K802]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.