Factsheet for Os11t0425300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0829000-01	plastid
Os06t0115400-01	plastid
Os10t0362300-03

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48470.1	Os01t0829000-01	AT4G28590.1	24132784
AT5G48470.1	Os10t0362300-03	AT5G35750.1	18642946
AT5G48470.1	Os06t0115400-01	AT5G51100.1	24132784

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90746	Sorghum	plastid	84.03	85.83
Zm00001d049152_P001	Maize	plastid	82.2	83.73
TraesCS5B01G069000.2	Wheat	plastid	80.89	81.53
TraesCS5D01G074600.1	Wheat	plastid	80.63	81.27
TraesCS5A01G063400.3	Wheat	plastid	77.75	77.34
VIT_00s0333g00020.t01	Wine grape	cytosol	62.3	70.41
Bra037485.1-P	Field mustard	cytosol	32.72	63.78
GSMUA_Achr8P28390_001	Banana	plastid	66.23	63.41
AT5G48470.1	Thale cress	plastid	62.3	59.95
PGSC0003DMT400036221	Potato	endoplasmic reticulum, golgi	60.99	59.29
Solyc09g056160.2.1	Tomato	extracellular	60.73	59.03
KRH66196	Soybean	endoplasmic reticulum, plastid	59.69	58.46
CDY00055	Canola	plastid	60.47	58.33
KRH07361	Soybean	plastid	58.9	58.29
CDY19946	Canola	plastid	60.21	58.08
Bra036169.1-P	Field mustard	plastid	60.21	58.08
CDX85338	Canola	plastid	43.19	51.4

Protein Annotations

MapMan:15.6.1.2.3.10	EntrezGene:4350378	ProteinID:AAX94817.1	ProteinID:AAX94819.1	ProteinID:AAX94820.1	ProteinID:ABA93180.1
ProteinID:ABA93181.1	ProteinID:ABA93182.1	EMBL:AK065810	EMBL:AK067248	ProteinID:BAF28138.1	ProteinID:BAT13785.1
ProteinID:BAT13786.1	ProteinID:EEE59640.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0042644	EnsemblPlantsGene:Os11g0425300
EnsemblPlants:Os11t0425300-01	InterPro:PRDA1	PANTHER:PTHR37262	UniProt:Q53K52	UniParc:UPI0000509672	RefSeq:XP_015615211.1
RefSeq:XP_015615212.1	SEG:seg	:	:	:	:

Description

Similar to predicted protein. (Os11t0425300-01);Conserved hypothetical protein. (Os11t0425300-02)

Coordinates

chr11:-:13460801..13466777

Molecular Weight (calculated)

41370.4 Da

IEP (calculated)

6.520

GRAVY (calculated)

-0.173

Length

382 amino acids

Sequence
(BLAST)

001: MAILPLSISH SLTSALSATS SGIGRPVARL LHPRVPSRPT VICLAAPPKV PVPIASPASL GDDPSKWDPA ECDALLRGGE QVASVLQEML KLMEDMEMDG
101: SFESLAVELI AQGVIGKRVD EMESGFLMAL DYMIQLAEKD SDNERKSLLE VVKQTVLDHL TKKCPPHVQV VGLLCQTEKK DSRHELLRRV AAGGGVFKND
201: KGLKCQIPGA NLNDIANQAD DLLESMESRP TIPDRKLLAR LVIVREEARN MMGGGLLDER NDRGFTTLPE AEVNFLSKLV ALKPGKALER MIKDVMQGKA
301: EGADNIENAN AGPDSKLNHL TGISGRGSVT GLKPRPVRPG MFLETVSKVL GGIYANNTSG ITAQHLEWVH QTTLKILQEM AF

Best Arabidopsis Sequence Match ( AT5G48470.1 )
(BLAST)

001: MLQSIHLRFS STPSPSKRES LIIPSVICSF PFTSSSFRPK QTQKLKRLVQ FCAPYEVGGG YTDEELFERY GTQQNQTNVK DKLDPAEYEA LLKGGEQVTS
101: VLEEMITLLE DMKMNEASEN VAVELAAQGV IGKRVDEMES GFMMALDYMI QLADKDQDEK RKSLLEVVKE TVLSHLTKKC PPHVQVIGLL CRTPKKESRH
201: ELLRRVAAGG GAFESENGTK LHIPGANLND IANQADDLLE TMETRPAIPD RKLLARLVLI REEARNMMGG GILDERNDRG FTTLPESEVN FLAKLVALKP
301: GKTVQQMIQN VMQGKDEGAD NLSKEDDSST EGRKPSGLNG RGSVTGRKPL PVRPGMFLET VTKVLGSIYS GNASGITAQH LEWVHQKTLQ VLEEIAY

Arabidopsis Description

PRDA1Protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q1H5E9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.