Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G245000.3 | |
| TraesCS1B01G256200.2 | |
| TraesCS1D01G244900.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G08720.1 | TraesCS1A01G245000.3 | AT5G13530.1 | 21343429 |
| AT1G08720.1 | TraesCS1B01G256200.2 | AT5G13530.1 | 21343429 |
| AT1G08720.1 | TraesCS1D01G244900.2 | AT5G13530.1 | 21343429 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G136400.2 | Wheat | cytosol, plastid | 97.82 | 97.92 |
| TraesCS1A01G131600.1 | Wheat | cytosol | 96.78 | 97.18 |
| HORVU1Hr1G035440.2 | Barley | plastid | 93.98 | 94.57 |
| Os10t0430900-01 | Rice | cytosol | 76.43 | 75.72 |
| KXG38479 | Sorghum | cytosol, plastid | 71.44 | 71.3 |
| TraesCS3B01G455600.1 | Wheat | cytosol | 15.47 | 53.79 |
| TraesCS4B01G276200.1 | Wheat | mitochondrion, plastid | 54.62 | 52.13 |
| GSMUA_Achr1P14150_001 | Banana | cytosol, plastid | 45.07 | 51.98 |
| GSMUA_Achr2P08840_001 | Banana | cytosol, plastid | 46.21 | 49.44 |
| KRH34027 | Soybean | cytosol | 45.07 | 46.67 |
| VIT_14s0030g01440.t01 | Wine grape | cytosol, plastid | 46.21 | 45.13 |
| KRG92780 | Soybean | cytosol | 44.96 | 44.55 |
| CDY22667 | Canola | cytosol | 39.46 | 44.39 |
| AT1G08720.1 | Thale cress | cytosol | 41.12 | 42.44 |
| TraesCS6B01G215100.2 | Wheat | mitochondrion | 36.45 | 40.81 |
| Solyc01g097980.2.1 | Tomato | cytosol, plastid | 41.43 | 40.63 |
| TraesCS4B01G012100.1 | Wheat | plastid | 28.35 | 35.36 |
| TraesCS2B01G446500.2 | Wheat | mitochondrion | 26.17 | 32.98 |
| Bra031639.1-P | Field mustard | cytosol | 39.56 | 32.96 |
| TraesCS7B01G095300.2 | Wheat | cytosol, plastid | 35.31 | 32.02 |
| CDY06328 | Canola | cytosol | 38.11 | 30.56 |
| TraesCS6B01G337200.1 | Wheat | cytosol | 34.58 | 29.95 |
| TraesCS5B01G091700.1 | Wheat | cytosol | 22.53 | 28.82 |
| TraesCS4B01G127400.1 | Wheat | cytosol | 22.22 | 28.57 |
| TraesCS6B01G352700.1 | Wheat | cytosol | 20.46 | 27.9 |
| TraesCS6B01G222400.1 | Wheat | cytosol | 21.39 | 26.01 |
| TraesCS3B01G304900.1 | Wheat | cytosol | 21.39 | 25.88 |
| TraesCS5B01G401200.1 | Wheat | nucleus | 20.25 | 24.31 |
| TraesCS5B01G403300.1 | Wheat | cytosol | 13.29 | 16.62 |
| TraesCS6B01G377500.2 | Wheat | cytosol | 14.23 | 12.85 |
| TraesCS5B01G069200.8 | Wheat | cytosol | 14.33 | 12.24 |
| TraesCS5B01G568400.1 | Wheat | mitochondrion | 15.37 | 12.06 |
| TraesCS7B01G003200.1 | Wheat | mitochondrion | 15.26 | 11.99 |
| TraesCS7B01G423200.2 | Wheat | cytosol | 13.71 | 11.95 |
| TraesCS7B01G047300.2 | Wheat | cytosol | 14.95 | 11.17 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.30 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF07714 | PFAM:PF14381 | PRINTS:PR00109 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR44741 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS1B01G154400 | EnsemblPlants:TraesCS1B01G154400.1 | TIGR:cd13999 | SEG:seg |
Description
No Description!
Coordinates
chr1B:+:256903624..256921746
Molecular Weight (calculated)
107128.0 Da
IEP (calculated)
6.225
GRAVY (calculated)
-0.497
Length
963 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIPFVTKWS HRSSEPAGPS NSAAAQQQQQ APSSPSAPSA PPPVASTEAA GDEFILQEEE YQMQLALALS ASASGAEGAG DPDGEQIRKA KLMSLGKGDP
101: VTNTDRGGGD TPESLSRRYR DYNFLDYNEK VIDGFYDIFG LSAESSGQGK IPSLAELQMS IGDLGYEVIV VDYKFDNALQ EMKEVAECCL LGCPDITVLV
201: RRIAEVVADH MGGPVIDANE MITRWLSKSI EQRTSHQTSL LHIGSIEIGL SRHRALLFKI LADIVGIPCK LVKGSHYTGV EDDAINIIKM DDKREFLVDV
301: MAAPGTLIPA DVFNSKGTPF NFCQILGQNQ VVESASNIED DPVALQSEHK RNQGHMFANN NRISDNLSSY ENTMTAGSSA REPGTLDPRM QLGKTSTLAS
401: APSKQKKNLQ LILDSHETEE SRKLFVEFDP FNATESGKSS LAFKGLNNRN NEFQRRRENV VPPSARSQQP LVMKNWSACN DISNNKQYNV ADGSVPRRNA
501: TDNASSSQLA LSTAKHYNSN VRELNDRVYA APARFYDNRI VGTSAMAKAS TGECLDRSQV PPGLYYDKML GTSSMNAAST SGTGKVAEKD PHNDPGKGPL
601: YSRFDGELSK NAQGFTPERD EHKENCGSHD HKVLHPDPRK SPLDRFMDRP RQNIECVSPS QVGSNKADMV LDEVFECEIL WEDLVIDERI GIGSYGEVYH
701: ADWNGTEVAV KKFLDQEFYG DALEEFRCEV RIMRRLRHPN IVLFMGAVTR PPHLSIVSEY LPRGSLYKII HRPNCQIDEK RRIKMALDVA RGMNCLHTSV
801: PTIVHRDLKS PNLLVDDNWT VKVCDFGLSR LKHSTFLSSK STAGTPEWMA PEVLRNEQSN EKCDIYSFGV ILWELATLRK PWHGMNQMQV VGAVGFQDRR
901: LDIPKEVDPI VASIIRDCWQ KDPNLRPSFI QLTSYLKTLQ RLVIPSHQET ASNHVPYEIS LYR
101: VTNTDRGGGD TPESLSRRYR DYNFLDYNEK VIDGFYDIFG LSAESSGQGK IPSLAELQMS IGDLGYEVIV VDYKFDNALQ EMKEVAECCL LGCPDITVLV
201: RRIAEVVADH MGGPVIDANE MITRWLSKSI EQRTSHQTSL LHIGSIEIGL SRHRALLFKI LADIVGIPCK LVKGSHYTGV EDDAINIIKM DDKREFLVDV
301: MAAPGTLIPA DVFNSKGTPF NFCQILGQNQ VVESASNIED DPVALQSEHK RNQGHMFANN NRISDNLSSY ENTMTAGSSA REPGTLDPRM QLGKTSTLAS
401: APSKQKKNLQ LILDSHETEE SRKLFVEFDP FNATESGKSS LAFKGLNNRN NEFQRRRENV VPPSARSQQP LVMKNWSACN DISNNKQYNV ADGSVPRRNA
501: TDNASSSQLA LSTAKHYNSN VRELNDRVYA APARFYDNRI VGTSAMAKAS TGECLDRSQV PPGLYYDKML GTSSMNAAST SGTGKVAEKD PHNDPGKGPL
601: YSRFDGELSK NAQGFTPERD EHKENCGSHD HKVLHPDPRK SPLDRFMDRP RQNIECVSPS QVGSNKADMV LDEVFECEIL WEDLVIDERI GIGSYGEVYH
701: ADWNGTEVAV KKFLDQEFYG DALEEFRCEV RIMRRLRHPN IVLFMGAVTR PPHLSIVSEY LPRGSLYKII HRPNCQIDEK RRIKMALDVA RGMNCLHTSV
801: PTIVHRDLKS PNLLVDDNWT VKVCDFGLSR LKHSTFLSSK STAGTPEWMA PEVLRNEQSN EKCDIYSFGV ILWELATLRK PWHGMNQMQV VGAVGFQDRR
901: LDIPKEVDPI VASIIRDCWQ KDPNLRPSFI QLTSYLKTLQ RLVIPSHQET ASNHVPYEIS LYR
001: MKHIFKKLHR GGNQEQQNRT NDAAPPSDQN RIHVSANPPQ ATPSSVTETL PVAGATSSMA SPAPTAASNR ADYMSSEEEY QVQLALAISA SNSQSSEDPE
101: KHQIRAATLL SLGSHQRMDS RRDSSEVVAQ RLSRQYWEYG VLDYEEKVVD SFYDVYSLST DSAKQGEMPS LEDLESNHGT PGFEAVVVNR PIDSSLHELL
201: EIAECIALGC STTSVSVLVQ RLAELVTEHM GGSAEDSSIV LARWTEKSSE FKAALNTCVF PIGFVKIGIS RHRALLFKVL ADSVRLPCRL VKGSHYTGNE
301: DDAVNTIRLE DEREYLVDLM TDPGTLIPAD FASASNNTVE PCNSNGNKFP TAQFSNDVPK LSEGEGSSHS SMANYSSSLD RRTEAERTDS SYPKVGPLRN
401: IDYSSPSSVT SSTQLENNSS TAIGKGSRGA IIECSRTNMN IVPYNQNSEE DPKNLFADLN PFQNKGADKL YMPTKSGLNN VDDFHQQKNN PLVGRSPAPM
501: MWKNYSCNEA PKRKENSYIE NLLPKLHRDP RYGNTQSSYA TSSSNGAISS NVHGRDNVTF VSPVAVPSSF TSTENQFRPS IVEDMNRNTN NELDLQPHTA
601: AVVHGQQNDE SHIHDHRKYT SDDISTGCDP RLKDHESTSS SLDSTSYRND PQVLDDADVG ECEIPWNDLV IAERIGLGSY GEVYHADWHG TEVAVKKFLD
701: QDFSGAALAE FRSEVRIMRR LRHPNVVFFL GAVTRPPNLS IVTEFLPRGS LYRILHRPKS HIDERRRIKM ALDVAMGMNC LHTSTPTIVH RDLKTPNLLV
801: DNNWNVKVGD FGLSRLKHNT FLSSKSTAGT PEWMAPEVLR NEPSNEKCDV YSFGVILWEL ATLRLPWRGM NPMQVVGAVG FQNRRLEIPK ELDPVVGRII
901: LECWQTDPNL RPSFAQLTEV LKPLNRLVLP TPQ
101: KHQIRAATLL SLGSHQRMDS RRDSSEVVAQ RLSRQYWEYG VLDYEEKVVD SFYDVYSLST DSAKQGEMPS LEDLESNHGT PGFEAVVVNR PIDSSLHELL
201: EIAECIALGC STTSVSVLVQ RLAELVTEHM GGSAEDSSIV LARWTEKSSE FKAALNTCVF PIGFVKIGIS RHRALLFKVL ADSVRLPCRL VKGSHYTGNE
301: DDAVNTIRLE DEREYLVDLM TDPGTLIPAD FASASNNTVE PCNSNGNKFP TAQFSNDVPK LSEGEGSSHS SMANYSSSLD RRTEAERTDS SYPKVGPLRN
401: IDYSSPSSVT SSTQLENNSS TAIGKGSRGA IIECSRTNMN IVPYNQNSEE DPKNLFADLN PFQNKGADKL YMPTKSGLNN VDDFHQQKNN PLVGRSPAPM
501: MWKNYSCNEA PKRKENSYIE NLLPKLHRDP RYGNTQSSYA TSSSNGAISS NVHGRDNVTF VSPVAVPSSF TSTENQFRPS IVEDMNRNTN NELDLQPHTA
601: AVVHGQQNDE SHIHDHRKYT SDDISTGCDP RLKDHESTSS SLDSTSYRND PQVLDDADVG ECEIPWNDLV IAERIGLGSY GEVYHADWHG TEVAVKKFLD
701: QDFSGAALAE FRSEVRIMRR LRHPNVVFFL GAVTRPPNLS IVTEFLPRGS LYRILHRPKS HIDERRRIKM ALDVAMGMNC LHTSTPTIVH RDLKTPNLLV
801: DNNWNVKVGD FGLSRLKHNT FLSSKSTAGT PEWMAPEVLR NEPSNEKCDV YSFGVILWEL ATLRLPWRGM NPMQVVGAVG FQNRRLEIPK ELDPVVGRII
901: LECWQTDPNL RPSFAQLTEV LKPLNRLVLP TPQ
Arabidopsis Description
EDR1Serine/threonine-protein kinase EDR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPR3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.