Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc01g096490.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G13530.1 | Solyc01g096490.2.1 | AT5G13530.1 | 21343429 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0084g00680.t01 | Wine grape | cytosol | 78.08 | 78.17 |
| KRH30086 | Soybean | nucleus | 75.69 | 75.5 |
| KRH20701 | Soybean | cytosol, plasma membrane | 64.18 | 73.75 |
| AT5G13530.1 | Thale cress | cytosol | 71.95 | 72.31 |
| Bra006205.1-P | Field mustard | cytosol | 71.1 | 72.2 |
| CDX70509 | Canola | cytosol | 71.1 | 71.58 |
| KXG21921 | Sorghum | cytosol | 66.56 | 66.81 |
| TraesCS1B01G256200.2 | Wheat | cytosol | 66.26 | 66.34 |
| TraesCS1D01G244900.2 | Wheat | plastid | 64.79 | 66.29 |
| TraesCS1A01G245000.3 | Wheat | cytosol | 66.2 | 66.24 |
| KRH62822 | Soybean | mitochondrion | 28.6 | 65.22 |
| GSMUA_Achr9P16290_001 | Banana | endoplasmic reticulum, golgi | 28.05 | 64.15 |
| Zm00001d038106_P002 | Maize | cytosol | 64.54 | 64.03 |
| Zm00001d010470_P005 | Maize | cytosol, nucleus, plasma membrane | 64.3 | 53.06 |
| HORVU7Hr1G076430.1 | Barley | plastid | 4.96 | 36.99 |
| HORVU7Hr1G076440.1 | Barley | plastid | 5.39 | 31.54 |
| Os05t0392050-00 | Rice | nucleus, plasma membrane | 7.16 | 29.77 |
| Solyc01g005030.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 9.49 | 13.45 |
Protein Annotations
Description
No Description!
Coordinates
chr1:-:87563984..87580157
Molecular Weight (calculated)
180742.0 Da
IEP (calculated)
6.390
GRAVY (calculated)
-0.267
Length
1633 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRVPCCSVCQ NRYDEEERCP LLLQCGHGFC RECLSRMFSA SPDSSLSCPR CRHVSLVGNS VTALKKNYAI LALIRDSRYS SDDEDEEEEN ERGFNENAED
0101: EENDSRRRHG ARAASSSGCG GGRIEVGSHQ EVKLIRRIGG ESMRHGVEMW AATVSGRSSG SRGRCRHKVA VKKVGVGEEM DVVWVQEKLE RLRRESMWCR
0201: NVCAFHGVTK LERSLCLIMD RCKGSVQTEM QRNEGRLTLE QILRYGADIA RGVAELHAAG IVCMNIKPSN LLLDANGHAV VSDYGLPAIL KKPACRKARL
0301: ECESTITHSC MDCTMLSPNY TAPEAWEPVK KSLNLFWDGA IGISPESDAW SFGCTLVEMC TGSIPWAGLS SEEIYRSVIK ARRQPPQYAS VVGVGIPPDL
0401: WKMIGECLQF KVSKRPTFSS MLATFLRHLQ EIPRSPPASP DNNLQYLGTN GVVPPAAYHS EVSLDDPSLL HRLVSEGNVN GVRDLLAKTV SGKSITSLRS
0501: VLEAQNADGQ TALHLACRRG SVELVEVILE CSQANVDVLD KDGDPPLVFA LAAGSPECVR ALIRRHANVR SRLREGLGPS VAHVCAYHGQ PDCMRELLLA
0601: GADPNAVDDE GESVLHRAVA KKYTDCAKII LENGGCKSMS ILNSKNLTPL HTCIATWNVA VVKRWVELAS IEDIADAIDI PSPVGTALCM AAALKKDREA
0701: EGRELVRLIL AAGADPAAQD TQHFRTALHT AAMINDVELV KIILDAGVDV NIKNVNNTIP LHVALNRGAK SCVGLLLSAG ANCNIQDDEG DNAFHVAAFS
0801: ANMIRENLDW IVLMLRYPDA AVEVRNHSGK TLCDYLEALP REWISEDLIE ALREKGVRLS PTVYEVGDWV KFKRSIVTPT YGWQGARHKS VGFVQNVLDR
0901: DNLIVSFCSG EGREAQVCRE AQVLVDEVVK VIPLDRGQHV KLKADVKEPR FGWRDHAHDS IGTVLCVDDD GVLRVGFPGA SRGWKADPAE MERVEEFKVG
1001: DWVRIRPTLT TAKHGFGSAT PGSIGVVYCI RPDNSLMVEL SYLPHPWHCE PEEVEPVEPF RIADRVCVKR TVAEPRYAWG GETHHSVGKI IDIEADGLLI
1101: IEIPNRPIPW QADPSDMEKV EDFKVGDWVR VKASVPSPKY GWEDITRNSV GIIHSLEEDG DVGIAFCFRS KPFSCSVTDV EKVPPFEVGQ EIHVLPSVSQ
1201: PRLGWSNETP ATVGKIARID MDGALNVRVA GRDSLWKVSA GDAERLSGFD VGDWVRSKPS LGTRPSYDWY SIGKESLAVV HSVQDTGYLE LACCFRKGRL
1301: MTHYTDIEKV SGFRIGQHVR FRSGLVEPRW GWRGTNPDSR GVITGVNADG EVRVAFFGLQ CLWKGDPADF EIEPTFEVAE WVKLREIASG WKSVGPGSIG
1401: VVQGMSYEGD KWDGNVFVAF CGEQDQWTGY CSHLEKVNKL LVGQRVRVRN SVKQPRFGWS GHSHASVGTI SAIDADGKLR IYTPAGSKSW MLDPSEVDLV
1501: EEKEIQVGDW VRVRENVSNP THQWGDVSHS SIGVVHRIED GDLWVAFCFL DRLWLCKALE MERIRAFKMG DKVRIRDGLV APRWGWGMET HASRGEVVGV
1601: DANGKLRIKF QWREGRPWIG DPADIVLHEH DDQ
0101: EENDSRRRHG ARAASSSGCG GGRIEVGSHQ EVKLIRRIGG ESMRHGVEMW AATVSGRSSG SRGRCRHKVA VKKVGVGEEM DVVWVQEKLE RLRRESMWCR
0201: NVCAFHGVTK LERSLCLIMD RCKGSVQTEM QRNEGRLTLE QILRYGADIA RGVAELHAAG IVCMNIKPSN LLLDANGHAV VSDYGLPAIL KKPACRKARL
0301: ECESTITHSC MDCTMLSPNY TAPEAWEPVK KSLNLFWDGA IGISPESDAW SFGCTLVEMC TGSIPWAGLS SEEIYRSVIK ARRQPPQYAS VVGVGIPPDL
0401: WKMIGECLQF KVSKRPTFSS MLATFLRHLQ EIPRSPPASP DNNLQYLGTN GVVPPAAYHS EVSLDDPSLL HRLVSEGNVN GVRDLLAKTV SGKSITSLRS
0501: VLEAQNADGQ TALHLACRRG SVELVEVILE CSQANVDVLD KDGDPPLVFA LAAGSPECVR ALIRRHANVR SRLREGLGPS VAHVCAYHGQ PDCMRELLLA
0601: GADPNAVDDE GESVLHRAVA KKYTDCAKII LENGGCKSMS ILNSKNLTPL HTCIATWNVA VVKRWVELAS IEDIADAIDI PSPVGTALCM AAALKKDREA
0701: EGRELVRLIL AAGADPAAQD TQHFRTALHT AAMINDVELV KIILDAGVDV NIKNVNNTIP LHVALNRGAK SCVGLLLSAG ANCNIQDDEG DNAFHVAAFS
0801: ANMIRENLDW IVLMLRYPDA AVEVRNHSGK TLCDYLEALP REWISEDLIE ALREKGVRLS PTVYEVGDWV KFKRSIVTPT YGWQGARHKS VGFVQNVLDR
0901: DNLIVSFCSG EGREAQVCRE AQVLVDEVVK VIPLDRGQHV KLKADVKEPR FGWRDHAHDS IGTVLCVDDD GVLRVGFPGA SRGWKADPAE MERVEEFKVG
1001: DWVRIRPTLT TAKHGFGSAT PGSIGVVYCI RPDNSLMVEL SYLPHPWHCE PEEVEPVEPF RIADRVCVKR TVAEPRYAWG GETHHSVGKI IDIEADGLLI
1101: IEIPNRPIPW QADPSDMEKV EDFKVGDWVR VKASVPSPKY GWEDITRNSV GIIHSLEEDG DVGIAFCFRS KPFSCSVTDV EKVPPFEVGQ EIHVLPSVSQ
1201: PRLGWSNETP ATVGKIARID MDGALNVRVA GRDSLWKVSA GDAERLSGFD VGDWVRSKPS LGTRPSYDWY SIGKESLAVV HSVQDTGYLE LACCFRKGRL
1301: MTHYTDIEKV SGFRIGQHVR FRSGLVEPRW GWRGTNPDSR GVITGVNADG EVRVAFFGLQ CLWKGDPADF EIEPTFEVAE WVKLREIASG WKSVGPGSIG
1401: VVQGMSYEGD KWDGNVFVAF CGEQDQWTGY CSHLEKVNKL LVGQRVRVRN SVKQPRFGWS GHSHASVGTI SAIDADGKLR IYTPAGSKSW MLDPSEVDLV
1501: EEKEIQVGDW VRVRENVSNP THQWGDVSHS SIGVVHRIED GDLWVAFCFL DRLWLCKALE MERIRAFKMG DKVRIRDGLV APRWGWGMET HASRGEVVGV
1601: DANGKLRIKF QWREGRPWIG DPADIVLHEH DDQ
0001: MVGRVKVPCC SVCHTRYNED ERVPLLLQCG HGFCKDCLSK MFSTSSDTTL TCPRCRHVSV VGNSVQGLRK NYAMLALIHA ASGGANFDCD YTDDEDDDDE
0101: EDGSDEDGAR AARGFHASSS INSLCGPVIE VGAHPEMKLV RQIGEESSSG GFGGVEMWDA TVAGGGGRCK HRVAVKKMTL TEDMDVEWMQ GQLESLRRAS
0201: MWCRNVCTFH GVVKMDGSLC LLMDRCFGSV QSEMQRNEGR LTLEQILRYG ADVARGVAEL HAAGVICMNI KPSNLLLDAS GNAVVSDYGL APILKKPTCQ
0301: KTRPEFDSSK VTLYTDCVTL SPHYTAPEAW GPVKKLFWED ASGVSPESDA WSFGCTLVEM CTGSTPWDGL SREEIFQAVV KARKVPPQYE RIVGVGIPRE
0401: LWKMIGECLQ FKPSKRPTFN AMLATFLRHL QEIPRSPSAS PDNGIAKICE VNIVQAPRAT NIGVFQDNPN NLHRVVLEGD FEGVRNILAK AAAGGGGSSV
0501: RSLLEAQNAD GQSALHLACR RGSAELVEAI LEYGEANVDI VDKDGDPPLV FALAAGSPQC VHVLIKKGAN VRSRLREGSG PSVAHVCSYH GQPDCMRELL
0601: VAGADPNAVD DEGETVLHRA VAKKYTDCAI VILENGGSRS MTVSNAKCLT PLHMCVATWN VAVIKRWVEV SSPEEISQAI NIPSPVGTAL CMAASIRKDH
0701: EKEGRELVQI LLAAGADPTA QDAQHGRTAL HTAAMANNVE LVRVILDAGV NANIRNVHNT IPLHMALARG ANSCVSLLLE SGSDCNIQDD EGDNAFHIAA
0801: DAAKMIRENL DWLIVMLRSP DAAVDVRNHS GKTVRDFLEA LPREWISEDL MEALLKRGVH LSPTIYEVGD WVKFKRGITT PLHGWQGAKP KSVGFVQTIL
0901: EKEDMIIAFC SGEARVLANE VVKLIPLDRG QHVRLRADVK EPRFGWRGQS RDSVGTVLCV DEDGILRVGF PGASRGWKAD PAEMERVEEF KVGDWVRIRQ
1001: NLTSAKHGFG SVVPGSMGIV YCVRPDSSLL VELSYLPNPW HCEPEEVEPV APFRIGDRVC VKRSVAEPRY AWGGETHHSV GKISEIENDG LLIIEIPNRP
1101: IPWQADPSDM EKIDDFKVGD WVRVKASVSS PKYGWEDITR NSIGVMHSLD EDGDVGIAFC FRSKPFSCSV TDVEKVTPFH VGQEIHMTPS ITQPRLGWSN
1201: ETPATIGKVM RIDMDGTLSA QVTGRQTLWR VSPGDAELLS GFEVGDWVRS KPSLGNRPSY DWSNVGRESI AVVHSIQETG YLELACCFRK GRWSTHYTDL
1301: EKIPALKVGQ FVHFQKGITE PRWGWRAAKP DSRGIITTVH ADGEVRVAFF GLPGLWRGDP ADLEVEPMFE VGEWVRLREG VSCWKSVGPG SVGVVHGVGY
1401: EGDEWDGTTS VSFCGEQERW AGPTSHLEKA KKLVVGQKTR VKLAVKQPRF GWSGHSHGSV GTISAIDADG KLRIYTPAGS KTWMLDPSEV ETIEEEELKI
1501: GDWVRVKASI TTPTYQWGEV NPSSTGVVHR MEDGDLCVSF CFLDRLWLCK AGELERIRPF RIGDRVKIKD GLVTPRWGWG METHASKGHV VGVDANGKLR
1601: IKFLWREGRP WIGDPADIVL DETSG
0101: EDGSDEDGAR AARGFHASSS INSLCGPVIE VGAHPEMKLV RQIGEESSSG GFGGVEMWDA TVAGGGGRCK HRVAVKKMTL TEDMDVEWMQ GQLESLRRAS
0201: MWCRNVCTFH GVVKMDGSLC LLMDRCFGSV QSEMQRNEGR LTLEQILRYG ADVARGVAEL HAAGVICMNI KPSNLLLDAS GNAVVSDYGL APILKKPTCQ
0301: KTRPEFDSSK VTLYTDCVTL SPHYTAPEAW GPVKKLFWED ASGVSPESDA WSFGCTLVEM CTGSTPWDGL SREEIFQAVV KARKVPPQYE RIVGVGIPRE
0401: LWKMIGECLQ FKPSKRPTFN AMLATFLRHL QEIPRSPSAS PDNGIAKICE VNIVQAPRAT NIGVFQDNPN NLHRVVLEGD FEGVRNILAK AAAGGGGSSV
0501: RSLLEAQNAD GQSALHLACR RGSAELVEAI LEYGEANVDI VDKDGDPPLV FALAAGSPQC VHVLIKKGAN VRSRLREGSG PSVAHVCSYH GQPDCMRELL
0601: VAGADPNAVD DEGETVLHRA VAKKYTDCAI VILENGGSRS MTVSNAKCLT PLHMCVATWN VAVIKRWVEV SSPEEISQAI NIPSPVGTAL CMAASIRKDH
0701: EKEGRELVQI LLAAGADPTA QDAQHGRTAL HTAAMANNVE LVRVILDAGV NANIRNVHNT IPLHMALARG ANSCVSLLLE SGSDCNIQDD EGDNAFHIAA
0801: DAAKMIRENL DWLIVMLRSP DAAVDVRNHS GKTVRDFLEA LPREWISEDL MEALLKRGVH LSPTIYEVGD WVKFKRGITT PLHGWQGAKP KSVGFVQTIL
0901: EKEDMIIAFC SGEARVLANE VVKLIPLDRG QHVRLRADVK EPRFGWRGQS RDSVGTVLCV DEDGILRVGF PGASRGWKAD PAEMERVEEF KVGDWVRIRQ
1001: NLTSAKHGFG SVVPGSMGIV YCVRPDSSLL VELSYLPNPW HCEPEEVEPV APFRIGDRVC VKRSVAEPRY AWGGETHHSV GKISEIENDG LLIIEIPNRP
1101: IPWQADPSDM EKIDDFKVGD WVRVKASVSS PKYGWEDITR NSIGVMHSLD EDGDVGIAFC FRSKPFSCSV TDVEKVTPFH VGQEIHMTPS ITQPRLGWSN
1201: ETPATIGKVM RIDMDGTLSA QVTGRQTLWR VSPGDAELLS GFEVGDWVRS KPSLGNRPSY DWSNVGRESI AVVHSIQETG YLELACCFRK GRWSTHYTDL
1301: EKIPALKVGQ FVHFQKGITE PRWGWRAAKP DSRGIITTVH ADGEVRVAFF GLPGLWRGDP ADLEVEPMFE VGEWVRLREG VSCWKSVGPG SVGVVHGVGY
1401: EGDEWDGTTS VSFCGEQERW AGPTSHLEKA KKLVVGQKTR VKLAVKQPRF GWSGHSHGSV GTISAIDADG KLRIYTPAGS KTWMLDPSEV ETIEEEELKI
1501: GDWVRVKASI TTPTYQWGEV NPSSTGVVHR MEDGDLCVSF CFLDRLWLCK AGELERIRPF RIGDRVKIKD GLVTPRWGWG METHASKGHV VGVDANGKLR
1601: IKFLWREGRP WIGDPADIVL DETSG
Arabidopsis Description
KEGE3 ubiquitin-protein ligase KEG [Source:UniProtKB/Swiss-Prot;Acc:Q9FY48]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.