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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70509

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G13530.1 CDX70509 AT5G13530.1 21343429
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006205.1-P Field mustard cytosol 96.92 97.76
AT5G13530.1 Thale cress cytosol 91.25 91.08
CDX78527 Canola cytosol 42.42 83.39
CDX78528 Canola cytosol 39.64 82.97
VIT_13s0084g00680.t01 Wine grape cytosol 74.66 74.25
Solyc01g096490.2.1 Tomato cytosol, nucleus 71.58 71.1
KXG21921 Sorghum cytosol 65.1 64.9
TraesCS1A01G245000.3 Wheat cytosol 64.36 63.97
TraesCS1B01G256200.2 Wheat cytosol 64.24 63.89
TraesCS1D01G244900.2 Wheat plastid 62.64 63.66
Zm00001d038106_P002 Maize cytosol 62.95 62.03
Zm00001d010470_P005 Maize cytosol, nucleus, plasma membrane 62.89 51.54
CDY02357 Canola cytosol 3.45 40.29
HORVU7Hr1G076430.1 Barley plastid 4.93 36.53
HORVU7Hr1G076440.1 Barley plastid 5.24 30.47
Os05t0392050-00 Rice nucleus, plasma membrane 6.78 27.99
CDY61393 Canola cytosol 6.84 25.0
CDY53702 Canola cytosol 6.97 24.89
CDX75229 Canola cytosol 8.94 23.65
CDX68827 Canola cytosol 8.94 23.65
CDY53700 Canola cytosol, peroxisome, plasma membrane 9.19 22.96
Protein Annotations
Gene3D:1.10.510.10Gene3D:1.25.40.20MapMan:11.1.2.5Gene3D:3.30.40.10GO:A0A078C2Q9InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfEnsemblPlants:CDX70509ProteinID:CDX70509ProteinID:CDX70509.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004842GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005768
GO:GO:0005769GO:GO:0005794GO:GO:0005802GO:GO:0006464GO:GO:0006468GO:GO:0006810
GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009719GO:GO:0009737GO:GO:0009738GO:GO:0009788GO:GO:0009987GO:GO:0016197
GO:GO:0016301GO:GO:0016567GO:GO:0016740GO:GO:0019538GO:GO:0032940GO:GO:0040007
GO:GO:0043621GO:GO:0045324GO:GO:0048589EnsemblPlantsGene:GSBRNA2T00140338001InterPro:IPR000719InterPro:IPR001841
InterPro:IPR002110InterPro:IPR013083InterPro:IPR020683InterPro:IPR036770InterPro:Kinase-like_dom_sfPFAM:PF00069
PFAM:PF12796PFAM:PF14634PRINTS:PR01415ScanProsite:PS00518PFscan:PS50011PFscan:PS50088
PFscan:PS50089PFscan:PS50297PANTHER:PTHR22967PANTHER:PTHR22967:SF70InterPro:Prot_kinase_domSMART:SM00184
SMART:SM00248SUPFAM:SSF48403SUPFAM:SSF56112SUPFAM:SSF57850UniParc:UPI0004EED47EInterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHDInterPro:Znf_RING_CSSEG:seg:::
Description
BnaC03g05930D
Coordinates
chrLK031791:+:790861..798833
Molecular Weight (calculated)
178025.0 Da
IEP (calculated)
6.242
GRAVY (calculated)
-0.234
Length
1622 amino acids
Sequence
(BLAST)
0001: MVAAKMKVPC CSVCHTRYNE DERVPLLLQC GHGFCKDCLS KMFSSSSDTS LACPRCRHVS VVGNSVQGLR KNFAMLALVG GGNFDCDYTD SDEDDEDDGD
0101: DGGAASSSRL DKSSSCGPVI EVGAHPEMKL VKRIGEDGSG GVEMWDATVA GGGGRCKHRV AVKKMCLTED MDVDWMQGQL ESLRKASMWC RNVCTFHGVV
0201: KMDGSMCLLM DRCYGSVQSE MERNEGRLTL EQILRYGADV ARGVAELHAA GVICMNIKPS NLLLDASGNA VVSDYGLAPI LKKPICQKTR PEFDSSKITP
0301: YTDCVTLSPH YTAPEAWGPV KKLFWEDASG VSPESDAWSF GCTLVEMCTG STPWDGLSRE EIFQAVVKAR KVPPQYERIV GVGIPRELWK MIGECLQFKP
0401: SKRPTFNAML ATFLRHLQEI PRSPSASPDN GFIKVCGVNV VEEPRATNMG VLPDNPINLH RVVLEGDSEG VSRNILAKAA TGSGGSSVRF LLEAQNADGQ
0501: SALHLACRRG SVELVEAILE YGEANVDIVD KDGDPPLVFA LAAGSPQCVH VLIKKGANVR SRLREGSGPS VAHVCSYHGQ PDCMRELLVA GADPNAVDDE
0601: GETVLHRAVT KKYTDCAIVI LENGGSRSMA VSNGKGLTPL HMCVSTWNVA VIKRWVEVSS PEEISQAINI PSPVGTALCM AAAIRKDHEK EGRELVQILL
0701: AAGADPTAQD AQHGRTALHT AAMANNVELV RVILDAGVNA NIRNVHNTIP LHMALARGAN ACVSLLLESG SDCNIQDDEG DNALHIAADA AKMIRENLDW
0801: LIVMLKRPDA AVDFPVYDHN LYNLLNSGKT VRDFLEALPR EWISEDLMEA LLKRGVHLSP TIYEIGDWVK FKRRITTPLH GWQGAKPKSV GFVQTILEKE
0901: DMIVAFCSGE AHVLASEVVK LIPLDRGQHV RLRKDVKEPR FGWRGQSRDS VGTVLCVDED GILRVGFPGA SRGWKADPAE MERVEEFKVG DWVRIRQNLT
1001: SAKHGFGSVV PGSMGIVYCV RPDSSLLVEL SYLPNPWHCE PEEVEPATPF RIGDRVCVKR SVAEPRYAWG GETHHSVGKI SEIENDGLLI IEIPNRPIPW
1101: QADPSDMEKI DDFKVGDWVR VKASVSSPKY GWEDITRNSI GVMHSSDEDG DVGIAFCFRS KPFSCSVTDV EKVVPFHVGQ EIHMIPSIAQ PRLGWSNETP
1201: ATIGKIMRID MDGTLSAQVT GRQTLWKVSP GDAEMLSGFE VGDWVRSKPS LGSRPSYDWF SVGRDSIAVV HSIQEAGYLE LACCFRKGRW STHYTDLEKI
1301: PSLKAGQFVH FQKGLTEPRW GWRGAKPDSR GIITTVHADG EVRVAFFGLP GLWKGDPADL EVERMFEVGE WVRLKEGVPS WKSIGPGSVG VVHGVGYEGD
1401: EWDGTISVSF CGEQERWTGS FTHLDKAKKL VVGQKTRVKL AVKQPRFGWS GHSHGSVGTI AAIDADGKLR IYTPAGSKTW MLDPSEVETI EEEELKIGNW
1501: VRVKPSITTP TYQWGEVNPS SIGVIHRMED GDLWVSFCFL DRLWLCKAVE MERIRPFGIG DKVKIKNGLV TPRWGWGMET HASKGHVVGV DANGKLRIKF
1601: LWREGRPWIG DPADIVLDEP SG
Best Arabidopsis Sequence Match ( AT5G13530.1 )
(BLAST)
0001: MVGRVKVPCC SVCHTRYNED ERVPLLLQCG HGFCKDCLSK MFSTSSDTTL TCPRCRHVSV VGNSVQGLRK NYAMLALIHA ASGGANFDCD YTDDEDDDDE
0101: EDGSDEDGAR AARGFHASSS INSLCGPVIE VGAHPEMKLV RQIGEESSSG GFGGVEMWDA TVAGGGGRCK HRVAVKKMTL TEDMDVEWMQ GQLESLRRAS
0201: MWCRNVCTFH GVVKMDGSLC LLMDRCFGSV QSEMQRNEGR LTLEQILRYG ADVARGVAEL HAAGVICMNI KPSNLLLDAS GNAVVSDYGL APILKKPTCQ
0301: KTRPEFDSSK VTLYTDCVTL SPHYTAPEAW GPVKKLFWED ASGVSPESDA WSFGCTLVEM CTGSTPWDGL SREEIFQAVV KARKVPPQYE RIVGVGIPRE
0401: LWKMIGECLQ FKPSKRPTFN AMLATFLRHL QEIPRSPSAS PDNGIAKICE VNIVQAPRAT NIGVFQDNPN NLHRVVLEGD FEGVRNILAK AAAGGGGSSV
0501: RSLLEAQNAD GQSALHLACR RGSAELVEAI LEYGEANVDI VDKDGDPPLV FALAAGSPQC VHVLIKKGAN VRSRLREGSG PSVAHVCSYH GQPDCMRELL
0601: VAGADPNAVD DEGETVLHRA VAKKYTDCAI VILENGGSRS MTVSNAKCLT PLHMCVATWN VAVIKRWVEV SSPEEISQAI NIPSPVGTAL CMAASIRKDH
0701: EKEGRELVQI LLAAGADPTA QDAQHGRTAL HTAAMANNVE LVRVILDAGV NANIRNVHNT IPLHMALARG ANSCVSLLLE SGSDCNIQDD EGDNAFHIAA
0801: DAAKMIRENL DWLIVMLRSP DAAVDVRNHS GKTVRDFLEA LPREWISEDL MEALLKRGVH LSPTIYEVGD WVKFKRGITT PLHGWQGAKP KSVGFVQTIL
0901: EKEDMIIAFC SGEARVLANE VVKLIPLDRG QHVRLRADVK EPRFGWRGQS RDSVGTVLCV DEDGILRVGF PGASRGWKAD PAEMERVEEF KVGDWVRIRQ
1001: NLTSAKHGFG SVVPGSMGIV YCVRPDSSLL VELSYLPNPW HCEPEEVEPV APFRIGDRVC VKRSVAEPRY AWGGETHHSV GKISEIENDG LLIIEIPNRP
1101: IPWQADPSDM EKIDDFKVGD WVRVKASVSS PKYGWEDITR NSIGVMHSLD EDGDVGIAFC FRSKPFSCSV TDVEKVTPFH VGQEIHMTPS ITQPRLGWSN
1201: ETPATIGKVM RIDMDGTLSA QVTGRQTLWR VSPGDAELLS GFEVGDWVRS KPSLGNRPSY DWSNVGRESI AVVHSIQETG YLELACCFRK GRWSTHYTDL
1301: EKIPALKVGQ FVHFQKGITE PRWGWRAAKP DSRGIITTVH ADGEVRVAFF GLPGLWRGDP ADLEVEPMFE VGEWVRLREG VSCWKSVGPG SVGVVHGVGY
1401: EGDEWDGTTS VSFCGEQERW AGPTSHLEKA KKLVVGQKTR VKLAVKQPRF GWSGHSHGSV GTISAIDADG KLRIYTPAGS KTWMLDPSEV ETIEEEELKI
1501: GDWVRVKASI TTPTYQWGEV NPSSTGVVHR MEDGDLCVSF CFLDRLWLCK AGELERIRPF RIGDRVKIKD GLVTPRWGWG METHASKGHV VGVDANGKLR
1601: IKFLWREGRP WIGDPADIVL DETSG
Arabidopsis Description
KEGE3 ubiquitin-protein ligase KEG [Source:UniProtKB/Swiss-Prot;Acc:Q9FY48]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.