CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011330.1-P	Field mustard	mitochondrion	92.33	97.59
CDX75229	Canola	cytosol	97.06	97.06
AT4G32250.1	Thale cress	cytosol	88.25	88.54
CDY61393	Canola	cytosol	58.73	81.08
CDY53702	Canola	cytosol	57.59	77.75
CDY53700	Canola	cytosol, peroxisome, plasma membrane	80.42	75.96
KRH05180	Soybean	cytosol	31.0	59.56
GSMUA_Achr8P25200_001	Banana	cytosol	53.83	58.3
KRH52418	Soybean	cytosol, peroxisome, plasma membrane	57.75	56.73
KRH61753	Soybean	plasma membrane	57.42	56.59
GSMUA_AchrUn_...	Banana	cytosol	56.12	54.34
Zm00001d046616_P001	Maize	cytosol, nucleus, peroxisome	55.46	53.97
KXG20460	Sorghum	cytosol	55.14	53.65
KRH15865	Soybean	plasma membrane	33.93	53.33
Os06t0639500-01	Rice	plastid	54.32	52.86
TraesCS7D01G512200.1	Wheat	cytosol, peroxisome, vacuole	54.32	52.61
HORVU7Hr1G116190.2	Barley	cytosol	53.83	52.3
VIT_04s0008g05600.t01	Wine grape	plasma membrane	63.95	52.27
TraesCS7A01G523000.2	Wheat	cytosol	54.65	51.7
TraesCS7B01G440000.2	Wheat	plasma membrane	54.65	51.46
KRH05181	Soybean	cytosol	27.08	49.11
CDY02357	Canola	cytosol	4.89	21.58
CDX78527	Canola	cytosol	16.15	12.0
CDX78528	Canola	cytosol	12.72	10.06
CDX70509	Canola	cytosol	23.65	8.94

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.31.2	MapMan:23.1.2.6	Gene3D:3.30.200.20	GO:A0A078BX10	EnsemblPlants:CDX68827
ProteinID:CDX68827	ProteinID:CDX68827.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00130547001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR22967	PANTHER:PTHR22967:SF83	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI0004EEC8B6	SEG:seg	:

Description

BnaC01g06260D

Coordinates

chrLK031789:+:1449273..1451670

Molecular Weight (calculated)

67776.6 Da

IEP (calculated)

6.974

GRAVY (calculated)

-0.245

Length

613 amino acids

Sequence
(BLAST)

001: MASTIAAQKP DDSEYEIIEG GSESALATGT SPWMNSATLK LRHRIGRGPF GDVWLATHHQ STEDYDEHHE VAIKMLHPIK EDQRKVVVDK FEDLFSKCQG
101: VESVCLLRGV SSISGRICII MKFYEGCVGD KMARLRGGKL SLPDVLRYGV DLVTGILELH SKGFLILNLK PSNFLLSDND KAILGDVGVP YLLLSIPLPS
201: SDMTMRLGTP NYMAPEQWQP EVRGPMSFET DSWGFGCSVV EMLTGVQPWC GKSADEIYNL VVRKQEKSSI PSGIPPPLEN LLRGCFMYDL RSRPSMTDIL
301: HVLKSLQDSE EEEVWRGIDS REIRKSSAAL GYTEWFLSKD QLRVGDTVRS RKPANSFKHE NMDVPEGTVV GLERDTDPDE FALVKVHGVH DPLRVHVSVL
401: ERVTNGLASG DWVRLKDGED KRHSLVGVIH SIDRDGNVAV GFIGLPTLWK GTSSQLQMAK GYSVGQFVKI KANVVIPRFK WMRKGRGIWA TGRISKVLPN
501: GCLEVEFPGV LPFGKEHGSS CLADPAEVEV VDFNTCEGVV KKYQHLEDFH WAVRPLLIAM GLLTAMKLGL FVGKKAGRSK DGKQRDGSGG QGGDCQIVDG
601: QDSGKSKWLV FSV

Best Arabidopsis Sequence Match ( AT4G32250.3 )
(BLAST)

001: MASKIIAGKP DDTEYEIIEG ESESALAAGT SPWMNSSTLK LRHRIGRGPF GDVWLATHHQ STEDYDEHHE VAIKMLYPIK EDQRRVVVDK FEDLFSKCQG
101: LENVCLLRGV SSINGKICVV MKFYEGSLGD KMARLKGGKL SLPDVLRYGV DLATGILELH SKGFLILNLK PSNFLLSDND KAILGDVGIP YLLLSIPLPS
201: SDMTERLGTP NYMAPEQWQP DVRGPMSFET DSWGFGCSIV EMLTGVQPWS GRSADEIYDL VVRKQEKLSI PSSIPPPLEN LLRGCFMYDL RSRPSMTDIL
301: LVLKSLQNSE EEQVRRGIDS REIRKSSATL GYTEWFLSKD HLQVRDTVRS RKPANSCKHE NMDVPEGMVV GLERDSTDPD GFVLVKVHGV HDPLRVHVSV
401: LERVTNGLAS GDWVRLKVRK DKRHSPVGVL HSIDREGNVA VGFIGLPTLW KGTSSQLQMA KVYSVGQFVK LKANVVIPRF KWMRKGRGIW ATGRISQVLP
501: NGCLEVDFPG MLPFGEEHGS YLADPAEVEI VNFNTCQGAV EKYQHLEDFH WAVRPLLIAM GLLTAMKLGI CVRKKIGRSK DGKQRDGSTG QGDCKIPDGK
601: GSDKSKWLVF F

Arabidopsis Description

AT4g32250/F10M6_110 [Source:UniProtKB/TrEMBL;Acc:Q8RWX4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.