CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61393	Canola	cytosol	43.79	33.33
KRH52418	Soybean	cytosol, peroxisome, plasma membrane	60.65	32.85
KRH61753	Soybean	plasma membrane	59.47	32.32
Bra011330.1-P	Field mustard	mitochondrion	48.82	28.45
AT4G32250.1	Thale cress	cytosol	50.3	27.82
CDX75229	Canola	cytosol	49.41	27.24
CDX68827	Canola	cytosol	49.11	27.08
Bra040070.1-P	Field mustard	cytosol	44.97	26.25
GSMUA_Achr8P25200_001	Banana	cytosol	43.79	26.15
Bra040071.1-P	Field mustard	cytosol, peroxisome, plasma membrane	49.7	25.89
Os06t0639500-01	Rice	plastid	48.22	25.87
CDY53700	Canola	cytosol, peroxisome, plasma membrane	49.11	25.58
HORVU7Hr1G116190.2	Barley	cytosol	47.63	25.52
Zm00001d046616_P001	Maize	cytosol, nucleus, peroxisome	47.34	25.4
TraesCS7D01G512200.1	Wheat	cytosol, peroxisome, vacuole	47.34	25.28
TraesCS7A01G523000.2	Wheat	cytosol	48.22	25.15
KXG20460	Sorghum	cytosol	46.45	24.92
GSMUA_AchrUn_...	Banana	cytosol	46.45	24.8
TraesCS7B01G440000.2	Wheat	plasma membrane	47.34	24.58
VIT_04s0008g05600.t01	Wine grape	plasma membrane	51.18	23.07
CDY53702	Canola	cytosol	20.71	15.42
KRH13360	Soybean	cytosol	9.17	11.88
KRH13354	Soybean	cytosol	6.51	9.44
KRH62822	Soybean	mitochondrion	15.38	7.26
KRH15865	Soybean	plasma membrane	7.1	6.15
KRH13353	Soybean	cytosol, mitochondrion, plasma membrane	2.66	4.66
KRH20701	Soybean	cytosol, plasma membrane	17.75	4.22
KRH30086	Soybean	nucleus	18.05	3.73
KRH62821	Soybean	cytosol	7.4	2.6
KRH05180	Soybean	cytosol	2.37	2.51

Protein Annotations

EMBL:ACUP02010684	EnsemblPlants:KRH05181	EnsemblPlantsGene:GLYMA_17G2117001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR22967	PANTHER:PTHR22967:SF60	ProteinID:KRH05181	ProteinID:KRH05181.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0006EDF017	UniProt:A0A0R0FG74	MapMan:18.4.1.31.2	MapMan:23.1.2.6	:	:

Description

hypothetical protein

Coordinates

chr17:+:34939447..34940464

Molecular Weight (calculated)

37261.4 Da

IEP (calculated)

9.377

GRAVY (calculated)

-0.315

Length

338 amino acids

Sequence
(BLAST)

001: ALNELTNNHG EWRYQGNGKV IPKSGSTGYT EWFLSKDHLQ VGDVVRSRKP SNACRPQNMD IPEGTVVGLE RNADHGFALV RVHGIHDPVK IHMSTLERVT
101: FGLVAGDWVR LRDENEKHSL VGILHAVNRD GRVAVGFLGL QTLWNGNSSE LEIAESYCIG QFVRLKDSLS SPRFEWRRKR GGASAAGRIS WILPNGCLVV
201: KFPGMLPFGN EPSTYLADPS EVEVVEFKTC PGMIEKYQHV EDHHWAIRPV LIAIGLFTAL KLGISVGKKV RRNNKVTAIE TETQYLDGQN QNAATSATTT
301: TTTKKPSTSS ATIPVSSMWV PAVANMIFKE SVTSSNGR

Best Arabidopsis Sequence Match ( AT4G32250.1 )
(BLAST)

001: MASKIIAGKP DDTEYEIIEG ESESALAAGT SPWMNSSTLK LRHRIGRGPF GDVWLATHHQ STEDYDEHHE VAIKMLYPIK EDQRRVVVDK FEDLFSKCQG
101: LENVCLLRGV SSINGKICVV MKFYEGSLGD KMARLKGGKL SLPDVLRYGV DLATGILELH SKGFLILNLK PSNFLLSDND KAILGDVGIP YLLLSIPLPS
201: SDMTERLGTP NYMAPEQWQP DVRGPMSFET DSWGFGCSIV EMLTGVQPWS GRSADEIYDL VVRKQEKLSI PSSIPPPLEN LLRGCFMYDL RSRPSMTDIL
301: LVLKSLQNSE EEQVRRGIDS REIRKSSATL GYTEWFLSKD HLQVRDTVRS RKPANSCKHE NMDVPEGMVV GLERDSTDPD GFVLVKVHGV HDPLRVHVSV
401: LERVTNGLAS GDWVRLKVRK DKRHSPVGVL HSIDREGNVA VGFIGLPTLW KGTSSQLQMA KVYSVGQFVK LKANVVIPRF KWMRKGRGIW ATGRISQVLP
501: NGCLEVDFPG MLPFGEEHGS YLADPAEVEI VNFNTCQGAV EKYQHLEDFH WAVRPLLIAM GLLTAMKLGI CVRKKIGRSK DGKQRDGSTG QGDCKIPDGK
601: GSDKSKWLVF F

Arabidopsis Description

AT4g32250/F10M6_110 [Source:UniProtKB/TrEMBL;Acc:Q8RWX4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.