CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH20701
KRH30086
KRH62822

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13530.1	KRH20701	AT5G13530.1	21343429
AT5G13530.1	KRH30086	AT5G13530.1	21343429
AT5G13530.1	KRH62822	AT5G13530.1	21343429

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78528	Canola	cytosol	64.39	59.48
KRH13360	Soybean	cytosol	21.23	58.24
GSMUA_Achr9P16290_001	Banana	endoplasmic reticulum, golgi	57.12	57.28
KRH30086	Soybean	nucleus	79.47	34.76
KRH20701	Soybean	cytosol, plasma membrane	66.48	33.5
VIT_13s0084g00680.t01	Wine grape	cytosol	69.27	30.41
AT5G13530.1	Thale cress	cytosol	66.06	29.11
Solyc01g096490.2.1	Tomato	cytosol, nucleus	65.22	28.6
TraesCS1D01G244900.2	Wheat	plastid	59.08	26.5
KXG21921	Sorghum	cytosol	59.22	26.06
TraesCS1B01G256200.2	Wheat	cytosol	59.36	26.06
TraesCS1A01G245000.3	Wheat	cytosol	59.22	25.98
Zm00001d038106_P002	Maize	cytosol	59.36	25.82
Bra023157.1-P	Field mustard	cytosol	7.96	23.65
Zm00001d010470_P005	Maize	cytosol, nucleus, plasma membrane	59.22	21.43
KRH05181	Soybean	cytosol	7.26	15.38
KRH13354	Soybean	cytosol	3.77	11.59
KRH61753	Soybean	plasma membrane	9.5	10.93
KRH52418	Soybean	cytosol, peroxisome, plasma membrane	9.36	10.74
HORVU7Hr1G076440.1	Barley	plastid	3.63	9.32
KRH13353	Soybean	cytosol, mitochondrion, plasma membrane	2.09	7.77
KRH15865	Soybean	plasma membrane	4.05	7.44
KRH05180	Soybean	cytosol	2.79	6.27
HORVU7Hr1G076430.1	Barley	plastid	1.82	5.94
Os05t0392050-00	Rice	nucleus, plasma membrane	2.79	5.09
KRH62821	Soybean	cytosol	6.15	4.57

Protein Annotations

MapMan:11.1.2.5	UniProt:A0A0R0K813	EMBL:ACUP02002366	EnsemblPlantsGene:GLYMA_04G134800	GO:GO:0003674	GO:GO:0003824
GO:GO:0004674	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlants:KRH62822	ProteinID:KRH62822	ProteinID:KRH62822.1	PANTHER:PTHR22967	PANTHER:PTHR22967:SF70
UniParc:UPI0006EE1408	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:19462810..19467556

Molecular Weight (calculated)

80441.3 Da

IEP (calculated)

6.356

GRAVY (calculated)

-0.369

Length

716 amino acids

Sequence
(BLAST)

001: MSSPRNLVRI LYPKSHAIRS SKVSTAITFN FPTQASFGWR GQSRDSIGTV LCVDDDGILR VGFPGASRGW KADPAEMERV EEFKVGDWVR IRPTLTSAKH
101: GLGSVTPGSI GIVYCIRPDS SLLIELSYLP NPWHCEPEEV EHVAPFRIGD QVCVKRSVAE PRYAWGGETH HSVGRISEIE NDGLLIIEIP NRPIPWQADP
201: SDMEKVEDFK VGDWVRVKAS VSSPKYGWED VTRTSIGVIH SLEEDGDMGV AFCFRSKPFS CSVTDMEKVP PFEVGQEIHV MPSVTQPRLG WSNESPATVG
301: KILKIDMDGA LNVRVTGRQN LWKVSPGDAE RVPGFEVGDW VRSKPSLGTR PSYDWNSVGR ESLAVVHSVQ DSGYLELACC FRKGKWITHY TDVEKVPSFK
401: VGQYVRFRTG LVEPRWGWRG AEPESHGVIT SIHADGEVRF AFFGLPGLWR GDPSDLEIEQ MFEVGEWVRL NYNANNWKSI GPGSVGVVQG IGYEGDELDR
501: SIFVGFCGEQ EKWVGPSSHL ERFDKLFVGQ KVRVKQYVKQ PRFGWSGHTH ASIGTIQAID ADGKLRIYTP AGSKTWVLDP SEVEVVEEKE LCIGDWVRVK
601: ASISTPTHHW GEVSHSSIGV VHRMEDEDLW VSFCFTERLW LCKAWEMEWV RPFKVGDKVR IRDGLVTPRW GWGMETHASK GQVVGVDANG KLRIKFRWRE
701: GRPWIGDPAD LALDED

Best Arabidopsis Sequence Match ( AT5G13530.1 )
(BLAST)

0001: MVGRVKVPCC SVCHTRYNED ERVPLLLQCG HGFCKDCLSK MFSTSSDTTL TCPRCRHVSV VGNSVQGLRK NYAMLALIHA ASGGANFDCD YTDDEDDDDE
0101: EDGSDEDGAR AARGFHASSS INSLCGPVIE VGAHPEMKLV RQIGEESSSG GFGGVEMWDA TVAGGGGRCK HRVAVKKMTL TEDMDVEWMQ GQLESLRRAS
0201: MWCRNVCTFH GVVKMDGSLC LLMDRCFGSV QSEMQRNEGR LTLEQILRYG ADVARGVAEL HAAGVICMNI KPSNLLLDAS GNAVVSDYGL APILKKPTCQ
0301: KTRPEFDSSK VTLYTDCVTL SPHYTAPEAW GPVKKLFWED ASGVSPESDA WSFGCTLVEM CTGSTPWDGL SREEIFQAVV KARKVPPQYE RIVGVGIPRE
0401: LWKMIGECLQ FKPSKRPTFN AMLATFLRHL QEIPRSPSAS PDNGIAKICE VNIVQAPRAT NIGVFQDNPN NLHRVVLEGD FEGVRNILAK AAAGGGGSSV
0501: RSLLEAQNAD GQSALHLACR RGSAELVEAI LEYGEANVDI VDKDGDPPLV FALAAGSPQC VHVLIKKGAN VRSRLREGSG PSVAHVCSYH GQPDCMRELL
0601: VAGADPNAVD DEGETVLHRA VAKKYTDCAI VILENGGSRS MTVSNAKCLT PLHMCVATWN VAVIKRWVEV SSPEEISQAI NIPSPVGTAL CMAASIRKDH
0701: EKEGRELVQI LLAAGADPTA QDAQHGRTAL HTAAMANNVE LVRVILDAGV NANIRNVHNT IPLHMALARG ANSCVSLLLE SGSDCNIQDD EGDNAFHIAA
0801: DAAKMIRENL DWLIVMLRSP DAAVDVRNHS GKTVRDFLEA LPREWISEDL MEALLKRGVH LSPTIYEVGD WVKFKRGITT PLHGWQGAKP KSVGFVQTIL
0901: EKEDMIIAFC SGEARVLANE VVKLIPLDRG QHVRLRADVK EPRFGWRGQS RDSVGTVLCV DEDGILRVGF PGASRGWKAD PAEMERVEEF KVGDWVRIRQ
1001: NLTSAKHGFG SVVPGSMGIV YCVRPDSSLL VELSYLPNPW HCEPEEVEPV APFRIGDRVC VKRSVAEPRY AWGGETHHSV GKISEIENDG LLIIEIPNRP
1101: IPWQADPSDM EKIDDFKVGD WVRVKASVSS PKYGWEDITR NSIGVMHSLD EDGDVGIAFC FRSKPFSCSV TDVEKVTPFH VGQEIHMTPS ITQPRLGWSN
1201: ETPATIGKVM RIDMDGTLSA QVTGRQTLWR VSPGDAELLS GFEVGDWVRS KPSLGNRPSY DWSNVGRESI AVVHSIQETG YLELACCFRK GRWSTHYTDL
1301: EKIPALKVGQ FVHFQKGITE PRWGWRAAKP DSRGIITTVH ADGEVRVAFF GLPGLWRGDP ADLEVEPMFE VGEWVRLREG VSCWKSVGPG SVGVVHGVGY
1401: EGDEWDGTTS VSFCGEQERW AGPTSHLEKA KKLVVGQKTR VKLAVKQPRF GWSGHSHGSV GTISAIDADG KLRIYTPAGS KTWMLDPSEV ETIEEEELKI
1501: GDWVRVKASI TTPTYQWGEV NPSSTGVVHR MEDGDLCVSF CFLDRLWLCK AGELERIRPF RIGDRVKIKD GLVTPRWGWG METHASKGHV VGVDANGKLR
1601: IKFLWREGRP WIGDPADIVL DETSG

Arabidopsis Description

KEGE3 ubiquitin-protein ligase KEG [Source:UniProtKB/Swiss-Prot;Acc:Q9FY48]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.