CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
plasma membrane 2
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH20701
KRH30086
KRH62822

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13530.1	KRH20701	AT5G13530.1	21343429
AT5G13530.1	KRH30086	AT5G13530.1	21343429
AT5G13530.1	KRH62822	AT5G13530.1	21343429

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30086	Soybean	nucleus	81.91	71.11
VIT_13s0084g00680.t01	Wine grape	cytosol	76.78	66.89
KRH62822	Soybean	mitochondrion	33.5	66.48
KRH13353	Soybean	cytosol, mitochondrion, plasma membrane	8.94	65.8
Solyc01g096490.2.1	Tomato	cytosol, nucleus	73.75	64.18
AT5G13530.1	Thale cress	cytosol	72.41	63.32
TraesCS1D01G244900.2	Wheat	plastid	66.92	59.59
KXG21921	Sorghum	cytosol	66.85	58.39
TraesCS1B01G256200.2	Wheat	cytosol	66.92	58.31
TraesCS1A01G245000.3	Wheat	cytosol	66.85	58.21
KRH62821	Soybean	cytosol	39.27	58.0
Zm00001d038106_P002	Maize	cytosol	64.67	55.83
KRH13360	Soybean	cytosol	9.08	49.43
Zm00001d010470_P005	Maize	cytosol, nucleus, plasma membrane	64.46	46.29
KRH13354	Soybean	cytosol	4.43	27.04
KRH52418	Soybean	cytosol, peroxisome, plasma membrane	9.29	21.15
KRH05180	Soybean	cytosol	4.64	20.69
KRH61753	Soybean	plasma membrane	9.01	20.58
KRH15865	Soybean	plasma membrane	5.56	20.26
KRH05181	Soybean	cytosol	4.22	17.75
HORVU7Hr1G076440.1	Barley	plastid	2.11	10.75
HORVU7Hr1G076430.1	Barley	plastid	1.48	9.59
Os05t0392050-00	Rice	nucleus, plasma membrane	1.62	5.85

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:11.1.2.5	EMBL:ACUP02008293	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_13G195200	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005769
GO:GO:0005794	GO:GO:0005802	GO:GO:0006464	GO:GO:0006468	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009788	GO:GO:0009987
GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0045324	InterPro:IPR000719
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:K7M0P1	EnsemblPlants:KRH20701	ProteinID:KRH20701
ProteinID:KRH20701.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF12796	PFAM:PF13637	PRINTS:PR01415
PFscan:PS50011	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR22967	PANTHER:PTHR22967:SF70	InterPro:Prot_kinase_dom
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112	UniParc:UPI0002955622	:	:

Description

hypothetical protein

Coordinates

chr13:+:30862185..30877782

Molecular Weight (calculated)

157553.0 Da

IEP (calculated)

5.760

GRAVY (calculated)

-0.228

Length

1421 amino acids

Sequence
(BLAST)

0001: MCARFMGLVR VGDGLWLVMD RCNGSIQSEM QRNEGRLTLE QVLRYGADIA RGIAELHAAG VVCMNIKPSN LLLDSNGHAV VSDYGLAAIL KKHSCWKGQP
0101: ECESSNTHSC MECTVLSPHY AAPEAWGQPV KKSLNLFWDD AIGISAESDA WSFGCTLVEM CTGFVPWAGL SSEEIYQAVV KAKKLPPQYA SVVGGGIPSD
0201: LWRMIGECLQ FKPSKRPSFT AMLAIFLRHL QGIPHSLPAS PDNDFVKSFS SNVMELPPLS EFEVSHQNPF HLHQRVSQGD VRSVRELLFK AASDYGNNYL
0301: SSLLEAQNAD GQNALHLACR RGSAELVEAI LENEEANVDV LDKDGDPPLV YALAAGSPEC VRSLIKRGAN VRSQLRDGFG PSVAHVCAHH GQPECMRELL
0401: LAGADPNAVD DEGESVLHRA VAKKSTDCAL VILENGGSRS MAILNSKNMT PLHLCVATWN VAVVKRWVEI ATSDEIAESV DIPSPMGTAL CMAAASKKDH
0501: ESEGRELVQI LLAAGADPYA QDSQHGWTAL HTAVMTDNVE LVKVILAAGV DLNIRNMHNG IPLHIALARG AKSCVELLLS IGADCNLQDD DGNTSFHIAA
0601: ETAKMIRENL DWLILMLGNP NADVLVRNHS GKTLLDVLEV LPREWISEDL MEALMKKGVC LSPTIFEVGD WVKFRKTSIT PTNWWEGDRQ KQVGFVQRVP
0701: DKDNLIVSFC SGDYNVLANE VVKVIPLDRG QHVQLKEDVK KPRFGWPGQS RDSIGTVLCV DDDGIIRVGF PGQSRGWKAD PGEMERVEEF KVGDWVRIRP
0801: FLTSTKYGLG SVTPGSIGIV YCIRPDSSLL IELSYLPTPW HCEPEEVEQV VPFRIGDRIC VKRSVAEPRY AWGGETHHSV GKIREIEGDG LLIIDIPNRP
0901: VPWQADPSDM EKVEDFKVGD WVRVKASVSA PRYGWEDVTR NSIGVIHSLE EDGDMGIAFC FRSKLFPCSV TDVEKVPHFE AGQEIRVMPS VNQPRLGWSN
1001: ESPSTFGKIA RIDLDGALNV RVPGRKSLWK VSPGDVEQLP GFEVGDWVCS KPSPGSRSSN DLNGVRSIAV VHSVQDSGYL ELACCFRKLK LLTHYTEVEK
1101: VPCFKVGQYV RFRTGLVEPR WGWRGAQPES RGFLTGIHAD GEVKVAFFGL PGLWRGDPAD LEIEQMFEVG EWVRLKDDAN DWNSIRPSSV GVVQGLGYEG
1201: DEWNYSTYVA FCGEQEKWVG PSSHLERVHK LFLEQKVRVK LNVKQPRFGW SGHTHESIGT IQAIDADGKL RVYTPEGSRA WMLDPSEVEV VEEKRLCIGD
1301: WVKVKASVST PTHHWGEVTH SSIGVVHRIE DENLWVAFCF MEKLWLCEAW EMEQVRPFRV GDNVRIKDGL VTPRWGWGME THASKGRVVG VDANGKVRIK
1401: FQWREGRPWV GDPANVVLDE N

Best Arabidopsis Sequence Match ( AT5G13530.1 )
(BLAST)

0001: MVGRVKVPCC SVCHTRYNED ERVPLLLQCG HGFCKDCLSK MFSTSSDTTL TCPRCRHVSV VGNSVQGLRK NYAMLALIHA ASGGANFDCD YTDDEDDDDE
0101: EDGSDEDGAR AARGFHASSS INSLCGPVIE VGAHPEMKLV RQIGEESSSG GFGGVEMWDA TVAGGGGRCK HRVAVKKMTL TEDMDVEWMQ GQLESLRRAS
0201: MWCRNVCTFH GVVKMDGSLC LLMDRCFGSV QSEMQRNEGR LTLEQILRYG ADVARGVAEL HAAGVICMNI KPSNLLLDAS GNAVVSDYGL APILKKPTCQ
0301: KTRPEFDSSK VTLYTDCVTL SPHYTAPEAW GPVKKLFWED ASGVSPESDA WSFGCTLVEM CTGSTPWDGL SREEIFQAVV KARKVPPQYE RIVGVGIPRE
0401: LWKMIGECLQ FKPSKRPTFN AMLATFLRHL QEIPRSPSAS PDNGIAKICE VNIVQAPRAT NIGVFQDNPN NLHRVVLEGD FEGVRNILAK AAAGGGGSSV
0501: RSLLEAQNAD GQSALHLACR RGSAELVEAI LEYGEANVDI VDKDGDPPLV FALAAGSPQC VHVLIKKGAN VRSRLREGSG PSVAHVCSYH GQPDCMRELL
0601: VAGADPNAVD DEGETVLHRA VAKKYTDCAI VILENGGSRS MTVSNAKCLT PLHMCVATWN VAVIKRWVEV SSPEEISQAI NIPSPVGTAL CMAASIRKDH
0701: EKEGRELVQI LLAAGADPTA QDAQHGRTAL HTAAMANNVE LVRVILDAGV NANIRNVHNT IPLHMALARG ANSCVSLLLE SGSDCNIQDD EGDNAFHIAA
0801: DAAKMIRENL DWLIVMLRSP DAAVDVRNHS GKTVRDFLEA LPREWISEDL MEALLKRGVH LSPTIYEVGD WVKFKRGITT PLHGWQGAKP KSVGFVQTIL
0901: EKEDMIIAFC SGEARVLANE VVKLIPLDRG QHVRLRADVK EPRFGWRGQS RDSVGTVLCV DEDGILRVGF PGASRGWKAD PAEMERVEEF KVGDWVRIRQ
1001: NLTSAKHGFG SVVPGSMGIV YCVRPDSSLL VELSYLPNPW HCEPEEVEPV APFRIGDRVC VKRSVAEPRY AWGGETHHSV GKISEIENDG LLIIEIPNRP
1101: IPWQADPSDM EKIDDFKVGD WVRVKASVSS PKYGWEDITR NSIGVMHSLD EDGDVGIAFC FRSKPFSCSV TDVEKVTPFH VGQEIHMTPS ITQPRLGWSN
1201: ETPATIGKVM RIDMDGTLSA QVTGRQTLWR VSPGDAELLS GFEVGDWVRS KPSLGNRPSY DWSNVGRESI AVVHSIQETG YLELACCFRK GRWSTHYTDL
1301: EKIPALKVGQ FVHFQKGITE PRWGWRAAKP DSRGIITTVH ADGEVRVAFF GLPGLWRGDP ADLEVEPMFE VGEWVRLREG VSCWKSVGPG SVGVVHGVGY
1401: EGDEWDGTTS VSFCGEQERW AGPTSHLEKA KKLVVGQKTR VKLAVKQPRF GWSGHSHGSV GTISAIDADG KLRIYTPAGS KTWMLDPSEV ETIEEEELKI
1501: GDWVRVKASI TTPTYQWGEV NPSSTGVVHR MEDGDLCVSF CFLDRLWLCK AGELERIRPF RIGDRVKIKD GLVTPRWGWG METHASKGHV VGVDANGKLR
1601: IKFLWREGRP WIGDPADIVL DETSG

Arabidopsis Description

KEGE3 ubiquitin-protein ligase KEG [Source:UniProtKB/Swiss-Prot;Acc:Q9FY48]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.