Factsheet for Os05t0392050-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus

Predictor Summary:

plastid 1
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os05t0392050-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13530.1	Os05t0392050-00	AT5G13530.1	21343429

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G076430.1	Barley	plastid	36.9	66.21
HORVU7Hr1G076440.1	Barley	plastid	35.88	50.54
KXG21921	Sorghum	cytosol	52.16	12.6
TraesCS1A01G245000.3	Wheat	cytosol	51.15	12.32
Zm00001d038106_P002	Maize	cytosol	50.64	12.09
TraesCS1B01G256200.2	Wheat	cytosol	49.87	12.02
Zm00001d010470_P005	Maize	cytosol, nucleus, plasma membrane	52.67	10.46
TraesCS1D01G244900.2	Wheat	plastid	41.98	10.34
KRH30086	Soybean	nucleus	31.81	7.64
Solyc01g096490.2.1	Tomato	cytosol, nucleus	29.77	7.16
VIT_13s0084g00680.t01	Wine grape	cytosol	29.52	7.11
AT5G13530.1	Thale cress	cytosol	28.75	6.95
Bra006205.1-P	Field mustard	cytosol	28.24	6.9
CDX70509	Canola	cytosol	27.99	6.78
Os06t0639500-01	Rice	plastid	6.87	4.29
KRH62822	Soybean	mitochondrion	5.09	2.79
Os05t0392000-01	Rice	cytosol, plasma membrane	0.51	1.8
KRH20701	Soybean	cytosol, plasma membrane	5.85	1.62
GSMUA_Achr9P16290_001	Banana	endoplasmic reticulum, golgi	1.78	0.98

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A0P0WM13	ProteinID:BAS93855.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0046872
InterPro:IPR001841	InterPro:IPR013083	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os05g0392050	EnsemblPlants:Os05t0392050-00	PFAM:PF00097
ScanProsite:PS00518	PFscan:PS50089	PANTHER:PTHR22967	PANTHER:PTHR22967:SF70	SMART:SM00184	SUPFAM:SSF56112
SUPFAM:SSF57850	UniParc:UPI000393C21E	InterPro:Znf_C3HC4_RING-type	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS
SEG:seg	:	:	:	:	:

Description

Hypothetical conserved gene. (Os05t0392050-00)

Coordinates

chr5:-:19066737..19067981

Molecular Weight (calculated)

42200.3 Da

IEP (calculated)

10.455

GRAVY (calculated)

-0.565

Length

393 amino acids

Sequence
(BLAST)

001: MTQVLNPKPK RRTYSNIAQN PPEKARTLDK TGTESRNGQH TTAHPSPPKS EEERALLVVP PRLPPHHHHH HHHHHHQPPH QKIPFLLPKP PPPLPTAAPH
101: HHRPPRSTPS LLPDAPRRAL ARAAPRRAAM RVPCCSLCHV RYDEEERAPL LLHCGHGFCR ACLARMLANA AGAVLACPRC RHPTAVGNSV SALRKNFPIL
201: SLLSSSPSSP SFLHSDSGGS SSDGSDDDDD DFFGRPSRRS SAAGAGAGAA APSLQPAGCA SFDLASHPDL KLARRIGSGP PGPAGQEVWS GTLSRGGGGG
301: GAKRCKHPVA VKRVPVTAGD VLEGVQEEVE RLRRAATWCR NVTTFHGAVR VGGHLCFVMD RYAGSVQTEM RQNGGRLTLE QILRCGIASK HGY

Best Arabidopsis Sequence Match ( AT5G13530.1 )
(BLAST)

0001: MVGRVKVPCC SVCHTRYNED ERVPLLLQCG HGFCKDCLSK MFSTSSDTTL TCPRCRHVSV VGNSVQGLRK NYAMLALIHA ASGGANFDCD YTDDEDDDDE
0101: EDGSDEDGAR AARGFHASSS INSLCGPVIE VGAHPEMKLV RQIGEESSSG GFGGVEMWDA TVAGGGGRCK HRVAVKKMTL TEDMDVEWMQ GQLESLRRAS
0201: MWCRNVCTFH GVVKMDGSLC LLMDRCFGSV QSEMQRNEGR LTLEQILRYG ADVARGVAEL HAAGVICMNI KPSNLLLDAS GNAVVSDYGL APILKKPTCQ
0301: KTRPEFDSSK VTLYTDCVTL SPHYTAPEAW GPVKKLFWED ASGVSPESDA WSFGCTLVEM CTGSTPWDGL SREEIFQAVV KARKVPPQYE RIVGVGIPRE
0401: LWKMIGECLQ FKPSKRPTFN AMLATFLRHL QEIPRSPSAS PDNGIAKICE VNIVQAPRAT NIGVFQDNPN NLHRVVLEGD FEGVRNILAK AAAGGGGSSV
0501: RSLLEAQNAD GQSALHLACR RGSAELVEAI LEYGEANVDI VDKDGDPPLV FALAAGSPQC VHVLIKKGAN VRSRLREGSG PSVAHVCSYH GQPDCMRELL
0601: VAGADPNAVD DEGETVLHRA VAKKYTDCAI VILENGGSRS MTVSNAKCLT PLHMCVATWN VAVIKRWVEV SSPEEISQAI NIPSPVGTAL CMAASIRKDH
0701: EKEGRELVQI LLAAGADPTA QDAQHGRTAL HTAAMANNVE LVRVILDAGV NANIRNVHNT IPLHMALARG ANSCVSLLLE SGSDCNIQDD EGDNAFHIAA
0801: DAAKMIRENL DWLIVMLRSP DAAVDVRNHS GKTVRDFLEA LPREWISEDL MEALLKRGVH LSPTIYEVGD WVKFKRGITT PLHGWQGAKP KSVGFVQTIL
0901: EKEDMIIAFC SGEARVLANE VVKLIPLDRG QHVRLRADVK EPRFGWRGQS RDSVGTVLCV DEDGILRVGF PGASRGWKAD PAEMERVEEF KVGDWVRIRQ
1001: NLTSAKHGFG SVVPGSMGIV YCVRPDSSLL VELSYLPNPW HCEPEEVEPV APFRIGDRVC VKRSVAEPRY AWGGETHHSV GKISEIENDG LLIIEIPNRP
1101: IPWQADPSDM EKIDDFKVGD WVRVKASVSS PKYGWEDITR NSIGVMHSLD EDGDVGIAFC FRSKPFSCSV TDVEKVTPFH VGQEIHMTPS ITQPRLGWSN
1201: ETPATIGKVM RIDMDGTLSA QVTGRQTLWR VSPGDAELLS GFEVGDWVRS KPSLGNRPSY DWSNVGRESI AVVHSIQETG YLELACCFRK GRWSTHYTDL
1301: EKIPALKVGQ FVHFQKGITE PRWGWRAAKP DSRGIITTVH ADGEVRVAFF GLPGLWRGDP ADLEVEPMFE VGEWVRLREG VSCWKSVGPG SVGVVHGVGY
1401: EGDEWDGTTS VSFCGEQERW AGPTSHLEKA KKLVVGQKTR VKLAVKQPRF GWSGHSHGSV GTISAIDADG KLRIYTPAGS KTWMLDPSEV ETIEEEELKI
1501: GDWVRVKASI TTPTYQWGEV NPSSTGVVHR MEDGDLCVSF CFLDRLWLCK AGELERIRPF RIGDRVKIKD GLVTPRWGWG METHASKGHV VGVDANGKLR
1601: IKFLWREGRP WIGDPADIVL DETSG

Arabidopsis Description

KEGE3 ubiquitin-protein ligase KEG [Source:UniProtKB/Swiss-Prot;Acc:Q9FY48]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.